RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 NKX2-2O95096 273 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 IGHG3P01860 377 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 RFPL3SP0C7P2 107 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 ACP2P11117 423 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 ABOP16442 354 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 GABRA3P34903 492 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 CA7P43166 264 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 MASP1P48740 699 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 PNLIPRP2P54317 469 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 NME5P56597 212 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 WNT3P56703 355 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 HBA1P69905 142 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 SNTA1Q13424 505 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 VPS26BQ4G0F5 336 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 SPANXN4Q5MJ08 99 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 FNDC7Q5VTL7 733 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 TMEM198Q66K66 360 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 FGD2Q7Z6J4 655 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 PACS2Q86VP3 889 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 CLECL1Q8IZS7 167 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 FBXO30Q8TB52 745 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 SFXN5Q8TD22 340 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 TMEM41AQ96HV5 264 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 TEX37Q96LM6 180 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 MAGEB18Q96M61 343 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 OR52B2Q96RD2 323 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 GALNT9Q9HCQ5 603 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 LIPGQ9Y5X9 500 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 GPR45Q9Y5Y3 372 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 MYO18BQ8IUG5 2567 aa13.33□□□□□ -0.28
VRK3-206ENST00000594090 TRGV8A0A0C4DH27 118 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 A0A1B0GTH9 108 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 A0A1B0GUH1 482 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 GXYLT2A0PJZ3 443 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 LRRTM2O43300 516 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 ICOSLGO75144 302 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 PDE9AO76083 593 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 IL33O95760 270 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 CELA3AP09093 270 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 RNF224P0DH78 156 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 CYP4B1P13584 511 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 IDO1P14902 403 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 CCT3P49368 545 aaKnown RBP13.32□□□□□ -0.28
VRK3-206ENST00000594090 PRIM2P49643 509 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 UFM1P61960 85 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 MRPS22P82650 360 aaKnown RBP13.32□□□□□ -0.28
VRK3-206ENST00000594090 LASP1Q14847 261 aaKnown RBP13.32□□□□□ -0.28
VRK3-206ENST00000594090 C3AR1Q16581 482 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 DECR1Q16698 335 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 EXOSC6Q5RKV6 272 aaKnown RBP13.32□□□□□ -0.28
VRK3-206ENST00000594090 SLC30A6Q6NXT4 461 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 ARHGAP11AQ6P4F7 1023 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 ZCCHC12Q6PEW1 402 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 PAOXQ6QHF9 649 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 EPGNQ6UW88 154 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 TRILQ7L0X0 811 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 FJX1Q86VR8 437 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 SLC16A11Q8NCK7 471 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 OR56A1Q8NGH5 318 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 GPR151Q8TDV0 419 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 SSC4DQ8WTU2 575 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 RNF138Q8WVD3 245 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 PIK3R3Q92569 461 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 SLC9A6Q92581 669 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 RELTQ969Z4 430 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 MOAP1Q96BY2 351 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 RMND5BQ96G75 393 aaPredicted RBP13.32□□□□□ -0.28
VRK3-206ENST00000594090 MARK4Q96L34 752 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 QPCTLQ9NXS2 382 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 B4GALT7Q9UBV7 327 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 SH3BGRL2Q9UJC5 107 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 TINAGQ9UJW2 476 aa13.32□□□□□ -0.28
VRK3-206ENST00000594090 MRTO4Q9UKD2 239 aaKnown RBP13.32□□□□□ -0.28
VRK3-206ENST00000594090 GNB5O14775 395 aa13.31□□□□□ -0.28
VRK3-206ENST00000594090 SNPHO15079 494 aa13.31□□□□□ -0.28
VRK3-206ENST00000594090 SCN2BO60939 215 aa13.31□□□□□ -0.28
VRK3-206ENST00000594090 KCNH1O95259 989 aa13.31□□□□□ -0.28
VRK3-206ENST00000594090 TGDSO95455 350 aa13.31□□□□□ -0.28
VRK3-206ENST00000594090 HMGN2P05204 90 aaKnown RBP13.31□□□□□ -0.28
VRK3-206ENST00000594090 ALOX5P09917 674 aa13.31□□□□□ -0.28
VRK3-206ENST00000594090 ELAVL4P26378 380 aaKnown RBP13.31□□□□□ -0.28
VRK3-206ENST00000594090 GDF1P27539 372 aa13.31□□□□□ -0.28
VRK3-206ENST00000594090 S100A3P33764 101 aa13.31□□□□□ -0.28
VRK3-206ENST00000594090 EVI2BP34910 448 aa13.31□□□□□ -0.28
VRK3-206ENST00000594090 PTGS2P35354 604 aa13.31□□□□□ -0.28
VRK3-206ENST00000594090 SOAT1P35610 550 aa13.31□□□□□ -0.28
VRK3-206ENST00000594090 CASP6P55212 293 aa13.31□□□□□ -0.28
VRK3-206ENST00000594090 PHC1P78364 1004 aa13.31□□□□□ -0.28
VRK3-206ENST00000594090 TP53BP2Q13625 1128 aa13.31□□□□□ -0.28
VRK3-206ENST00000594090 SLC10A1Q14973 349 aa13.31□□□□□ -0.28
VRK3-206ENST00000594090 DUSP5Q16690 384 aa13.31□□□□□ -0.28
VRK3-206ENST00000594090 FAM174BQ3ZCQ3 159 aa13.31□□□□□ -0.28
VRK3-206ENST00000594090 SPDYE7PQ495Y7 208 aa13.31□□□□□ -0.28
VRK3-206ENST00000594090 PDCD4Q53EL6 469 aaKnown RBP13.31□□□□□ -0.28
VRK3-206ENST00000594090 ANXA8L1Q5VT79 327 aa13.31□□□□□ -0.28
VRK3-206ENST00000594090 ANGPTL8Q6UXH0 198 aa13.31□□□□□ -0.28
VRK3-206ENST00000594090 C16orf58Q96GQ5 468 aa13.31□□□□□ -0.28
VRK3-206ENST00000594090 GNRHR2Q96P88 292 aa13.31□□□□□ -0.28
VRK3-206ENST00000594090 YIPF4Q9BSR8 244 aa13.31□□□□□ -0.28
VRK3-206ENST00000594090 UBQLN3Q9H347 655 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms