RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 MTHFD2LQ9H903 347 aaPredicted RBP18.4■□□□□ 0.54
CLIP3-206ENST00000593074 FBXO8Q9NRD0 319 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 DNAJC27Q9NZQ0 273 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 ZNF443Q9Y2A4 671 aaPredicted RBP18.4■□□□□ 0.54
CLIP3-206ENST00000593074 B3GNT3Q9Y2A9 372 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 IFT52Q9Y366 437 aa18.4■□□□□ 0.54
CLIP3-206ENST00000593074 A0A087WV62 115 aa18.39■□□□□ 0.53
CLIP3-206ENST00000593074 B4DGG1 531 aa18.39■□□□□ 0.53
CLIP3-206ENST00000593074 CLDN25C9JDP6 229 aa18.39■□□□□ 0.53
CLIP3-206ENST00000593074 J3QRK9 145 aa18.39■□□□□ 0.53
CLIP3-206ENST00000593074 IFI6P09912 130 aa18.39■□□□□ 0.53
CLIP3-206ENST00000593074 IDUAP35475 653 aa18.39■□□□□ 0.53
CLIP3-206ENST00000593074 UGT2B10P36537 528 aa18.39■□□□□ 0.53
CLIP3-206ENST00000593074 TGFBR1P36897 503 aa18.39■□□□□ 0.53
CLIP3-206ENST00000593074 CDK5Q00535 292 aa18.39■□□□□ 0.53
CLIP3-206ENST00000593074 ST3GAL3Q11203 375 aa18.39■□□□□ 0.53
CLIP3-206ENST00000593074 TRAM2Q15035 370 aa18.39■□□□□ 0.53
CLIP3-206ENST00000593074 ARMCX4Q5H9R4 360 aa18.39■□□□□ 0.53
CLIP3-206ENST00000593074 SLC25A30Q5SVS4 291 aa18.39■□□□□ 0.53
CLIP3-206ENST00000593074 TMEM52Q8NDY8 209 aa18.39■□□□□ 0.53
CLIP3-206ENST00000593074 SHDQ96IW2 340 aa18.39■□□□□ 0.53
CLIP3-206ENST00000593074 FOXQ1Q9C009 403 aa18.39■□□□□ 0.53
CLIP3-206ENST00000593074 SEMA4GQ9NTN9 838 aa18.39■□□□□ 0.53
CLIP3-206ENST00000593074 FBXL21Q9UKT6 434 aa18.39■□□□□ 0.53
CLIP3-206ENST00000593074 POMT2Q9UKY4 750 aa18.39■□□□□ 0.53
CLIP3-206ENST00000593074 MKLN1Q9UL63 735 aa18.39■□□□□ 0.53
CLIP3-206ENST00000593074 WDR45Q9Y484 360 aa18.39■□□□□ 0.53
CLIP3-206ENST00000593074 CPSF4LA6NMK7 179 aaKnown RBP18.38■□□□□ 0.53
CLIP3-206ENST00000593074 FGF17O60258 216 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 PLOD3O60568 738 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 CD38P28907 300 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 TRHRP34981 398 aaPredicted RBP18.38■□□□□ 0.53
CLIP3-206ENST00000593074 RGS6P49758 472 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 CLK1P49759 484 aaKnown RBP18.38■□□□□ 0.53
CLIP3-206ENST00000593074 LIMK1P53667 647 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 STARD6P59095 220 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 TUBA1BP68363 451 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 ID2Q02363 134 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 PUS10Q3MIT2 529 aaKnown RBP18.38■□□□□ 0.53
CLIP3-206ENST00000593074 TRMT12Q53H54 448 aaKnown RBP18.38■□□□□ 0.53
CLIP3-206ENST00000593074 C16orf87Q6PH81 154 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 TUBA1AQ71U36 451 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 ADCK1Q86TW2 530 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 CA13Q8N1Q1 262 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 CLIP4Q8N3C7 705 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 FAM26EQ8N5C1 309 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 IQCF1Q8N6M8 205 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 TCEANCQ8N8B7 351 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 PRR14Q9BWN1 585 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 PIGUQ9H490 435 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 ZBTB20Q9HC78 741 aaPredicted RBP18.38■□□□□ 0.53
CLIP3-206ENST00000593074 HMG20AQ9NP66 347 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 A0A1W2PPC1 479 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 LDB3O75112 727 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 GPR75O95800 540 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 WNT1P04628 370 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 RPLP0P05388 317 aaKnown RBP18.38■□□□□ 0.53
CLIP3-206ENST00000593074 CCNYL3P0C7X3 344 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 TYRP1P17643 537 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 IFNGR2P38484 337 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 AVPR1BP47901 424 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 GIPRP48546 466 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 PCYT1AP49585 367 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 RGS8P57771 180 aaPredicted RBP18.38■□□□□ 0.53
CLIP3-206ENST00000593074 SHC2P98077 582 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 COL9A2Q14055 689 aaPredicted RBP18.38■□□□□ 0.53
CLIP3-206ENST00000593074 ZNF846Q147U1 533 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 C19orf48Q6RUI8 117 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 Q6ZNX1 250 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 ZNF438Q7Z4V0 828 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 KIF18BQ86Y91 864 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 PEX5LQ8IYB4 626 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 SHISA5Q8N114 240 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 OR5T3Q8NGG3 340 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 S100ZQ8WXG8 99 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 OR5M11Q96RB7 305 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 NELL2Q99435 816 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 WDR12Q9GZL7 423 aaKnown RBP18.38■□□□□ 0.53
CLIP3-206ENST00000593074 ZNF350Q9GZX5 532 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 DCSTAMPQ9H295 470 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 SEMA6CQ9H3T2 930 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 ETAA1Q9NY74 926 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 WNT16Q9UBV4 365 aa18.38■□□□□ 0.53
CLIP3-206ENST00000593074 RPL36Q9Y3U8 105 aaKnown RBP18.38■□□□□ 0.53
CLIP3-206ENST00000593074 PRKYO43930 277 aa18.37■□□□□ 0.53
CLIP3-206ENST00000593074 CSF2P04141 144 aa18.37■□□□□ 0.53
CLIP3-206ENST00000593074 DBTP11182 482 aaKnown RBP18.37■□□□□ 0.53
CLIP3-206ENST00000593074 IL9P15248 144 aa18.37■□□□□ 0.53
CLIP3-206ENST00000593074 VSX2P58304 361 aaPredicted RBP18.37■□□□□ 0.53
CLIP3-206ENST00000593074 EFNB1P98172 346 aa18.37■□□□□ 0.53
CLIP3-206ENST00000593074 ZNF91Q05481 1191 aa18.37■□□□□ 0.53
CLIP3-206ENST00000593074 GINS1Q14691 196 aa18.37■□□□□ 0.53
CLIP3-206ENST00000593074 NR1D2Q14995 579 aa18.37■□□□□ 0.53
CLIP3-206ENST00000593074 ELOCQ15369 112 aa18.37■□□□□ 0.53
CLIP3-206ENST00000593074 IGFN1Q86VF2 1251 aa18.37■□□□□ 0.53
CLIP3-206ENST00000593074 ARHGEF39Q8N4T4 335 aa18.37■□□□□ 0.53
CLIP3-206ENST00000593074 CADM4Q8NFZ8 388 aa18.37■□□□□ 0.53
CLIP3-206ENST00000593074 B4GALNT2Q8NHY0 566 aa18.37■□□□□ 0.53
CLIP3-206ENST00000593074 GNPDA2Q8TDQ7 276 aa18.37■□□□□ 0.53
CLIP3-206ENST00000593074 FGF11Q92914 225 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms