RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 ZG16O60844 167 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 ICOSLGO75144 302 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 UGT2B11O75310 529 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 SNNO75324 88 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-227ENST00000591849 TRIM3O75382 744 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-227ENST00000591849 C6orf47O95873 294 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 LDLRP01130 860 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 IFI6P09912 130 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 ALOX5P09917 674 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 RFPL3SP0C7P2 107 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 CT45A8P0DMV1 189 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 CT45A9P0DMV2 189 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 SOX18P35713 384 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 CCT3P49368 545 aaKnown RBP9.23□□□□□ -0.93
BRCA1-227ENST00000591849 CLNS1AP54105 237 aaKnown RBP9.23□□□□□ -0.93
BRCA1-227ENST00000591849 FOXO1Q12778 655 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 GAB1Q13480 694 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 TP53BP2Q13625 1128 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 HYAL4Q2M3T9 481 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 CT45A2Q5DJT8 189 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 WLSQ5T9L3 541 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 ANXA8L1Q5VT79 327 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 TMEM211Q6ICI0 200 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 ZNF585AQ6P3V2 769 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 NPSR1Q6W5P4 371 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 C3P1Q6ZMU1 363 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 CD163Q86VB7 1156 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 WDR75Q8IWA0 830 aaKnown RBP9.23□□□□□ -0.93
BRCA1-227ENST00000591849 CDRT4Q8N9R6 151 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 OR4N2Q8NGD1 307 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 FBXO30Q8TB52 745 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 HGDQ93099 445 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 SARAFQ96BY9 339 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 COQ8BQ96D53 544 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 GNRHR2Q96P88 292 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 MS4A4EQ96PG1 132 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 YIPF4Q9BSR8 244 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 BHLHE41Q9C0J9 482 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-227ENST00000591849 ZDHHC11Q9H8X9 412 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 MEAF6Q9HAF1 191 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 SDHAF3Q9NRP4 125 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 ZCCHC3Q9NUD5 404 aaKnown RBP9.23□□□□□ -0.93
BRCA1-227ENST00000591849 INTS9Q9NV88 658 aaKnown RBP9.23□□□□□ -0.93
BRCA1-227ENST00000591849 QPCTLQ9NXS2 382 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 ASIC5Q9NY37 505 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 FAF1Q9UNN5 650 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-227ENST00000591849 ZNF835Q9Y2P0 537 aa9.23□□□□□ -0.93
BRCA1-227ENST00000591849 BCKDKO14874 412 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 SCO2O43819 266 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 SUSD5O60279 629 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 TSPAN2O60636 221 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 HCN1O60741 890 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 DIAPH2O60879 1101 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 CPSF4O95639 269 aaKnown RBP9.22□□□□□ -0.93
BRCA1-227ENST00000591849 KRT16P08779 473 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 CELA3AP09093 270 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 CYP4B1P13584 511 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 HPGDP15428 266 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 ELAVL4P26378 380 aaKnown RBP9.22□□□□□ -0.93
BRCA1-227ENST00000591849 EPHA3P29320 983 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 S100A3P33764 101 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 FRKP42685 505 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-227ENST00000591849 KIR3DL1P43629 444 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 DIO3P55073 304 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 NME5P56597 212 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 PPP2R2AP63151 447 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 PSG6Q00889 435 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 SNTA1Q13424 505 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 MLC1Q15049 377 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 GXYLT1Q4G148 440 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 TTMPQ5BVD1 217 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 TIGD3Q6B0B8 471 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 DESI1Q6ICB0 168 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 OR4F3Q6IEY1 312 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 BHLHB9Q6PI77 547 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 Q6ZPB1 254 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-227ENST00000591849 TRILQ7L0X0 811 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 MRGPRGQ86SM5 289 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 DOLPP1Q86YN1 238 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 LRRC34Q8IZ02 419 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 COX18Q8N8Q8 333 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 OR4K17Q8NGC6 315 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 OR56A1Q8NGH5 318 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 OR4A15Q8NGL6 344 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 OR5M9Q8NGP3 310 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 PIWIL2Q8TC59 973 aaKnown RBP9.22□□□□□ -0.93
BRCA1-227ENST00000591849 ADAMTS15Q8TE58 950 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 RMND5BQ96G75 393 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-227ENST00000591849 SLC35A4Q96G79 324 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 TMEM41AQ96HV5 264 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 PSMG3-AS1Q96PY0 264 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 LMF2Q9BU23 707 aaKnown RBP9.22□□□□□ -0.93
BRCA1-227ENST00000591849 SLC6A15Q9H2J7 730 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 WDR55Q9H6Y2 383 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-227ENST00000591849 PROK2Q9HC23 129 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 GALNT9Q9HCQ5 603 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 NEUROD4Q9HD90 331 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 MEMO1Q9Y316 297 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 PCDHGB3Q9Y5G1 929 aa9.22□□□□□ -0.93
BRCA1-227ENST00000591849 LIPGQ9Y5X9 500 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms