RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 HBA1P69905 142 aa10.91□□□□□ -0.66
LIG3-213ENST00000590630 DECR1Q16698 335 aa10.91□□□□□ -0.66
LIG3-213ENST00000590630 GSTA3Q16772 222 aa10.91□□□□□ -0.66
LIG3-213ENST00000590630 ANXA8L1Q5VT79 327 aa10.91□□□□□ -0.66
LIG3-213ENST00000590630 TMEM198Q66K66 360 aa10.91□□□□□ -0.66
LIG3-213ENST00000590630 OR4F3Q6IEY1 312 aa10.91□□□□□ -0.66
LIG3-213ENST00000590630 MFSD12Q6NUT3 480 aa10.91□□□□□ -0.66
LIG3-213ENST00000590630 SLC30A6Q6NXT4 461 aa10.91□□□□□ -0.66
LIG3-213ENST00000590630 BHLHB9Q6PI77 547 aa10.91□□□□□ -0.66
LIG3-213ENST00000590630 PAOXQ6QHF9 649 aa10.91□□□□□ -0.66
LIG3-213ENST00000590630 ACAD11Q709F0 780 aa10.91□□□□□ -0.66
LIG3-213ENST00000590630 ARFGAP2Q8N6H7 521 aa10.91□□□□□ -0.66
LIG3-213ENST00000590630 TMEM251Q8N6I4 163 aa10.91□□□□□ -0.66
LIG3-213ENST00000590630 VPS37AQ8NEZ2 397 aa10.91□□□□□ -0.66
LIG3-213ENST00000590630 OR4N2Q8NGD1 307 aa10.91□□□□□ -0.66
LIG3-213ENST00000590630 OR56A1Q8NGH5 318 aa10.91□□□□□ -0.66
LIG3-213ENST00000590630 SFXN5Q8TD22 340 aa10.91□□□□□ -0.66
LIG3-213ENST00000590630 GIMAP5Q96F15 307 aa10.91□□□□□ -0.66
LIG3-213ENST00000590630 ADOQ96SZ5 270 aa10.91□□□□□ -0.66
LIG3-213ENST00000590630 ZNF703Q9H7S9 590 aaPredicted RBP10.91□□□□□ -0.66
LIG3-213ENST00000590630 PLSCR2Q9NRY7 297 aa10.91□□□□□ -0.66
LIG3-213ENST00000590630 FAM120CQ9NX05 1096 aaKnown RBP10.91□□□□□ -0.66
LIG3-213ENST00000590630 CBLCQ9ULV8 474 aa10.91□□□□□ -0.66
LIG3-213ENST00000590630 PCDHGB4Q9UN71 923 aa10.91□□□□□ -0.66
LIG3-213ENST00000590630 OSGIN2Q9Y236 505 aa10.91□□□□□ -0.66
LIG3-213ENST00000590630 GPR45Q9Y5Y3 372 aa10.91□□□□□ -0.66
LIG3-213ENST00000590630 FLNBO75369 2602 aaKnown RBP10.91□□□□□ -0.66
LIG3-213ENST00000590630 PCNX1Q96RV3 2341 aa10.91□□□□□ -0.66
LIG3-213ENST00000590630 PRSS51A0A1B0GVH4 220 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 PRAMEF25A6NGN4 478 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 LRRC3CA6NJW4 275 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 UBDO15205 165 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 POLR3GO15318 223 aaPredicted RBP10.9□□□□□ -0.66
LIG3-213ENST00000590630 WISP2O76076 250 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 SOX30O94993 753 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 AGFG2O95081 481 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 NKX2-2O95096 273 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 KCNH1O95259 989 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 HMGN2P05204 90 aaKnown RBP10.9□□□□□ -0.66
LIG3-213ENST00000590630 KRT16P08779 473 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 ELAVL4P26378 380 aaKnown RBP10.9□□□□□ -0.66
LIG3-213ENST00000590630 GABRA3P34903 492 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 MAGEA5P43359 124 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 MASP1P48740 699 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 PRIM2P49643 509 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 CASP6P55212 293 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 WNT3P56703 355 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 UFM1P61960 85 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 GAB1Q13480 694 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 UBAP2LQ14157 1087 aaKnown RBP10.9□□□□□ -0.66
LIG3-213ENST00000590630 FAM174BQ3ZCQ3 159 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 SPDYE7PQ495Y7 208 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 PDCD4Q53EL6 469 aaKnown RBP10.9□□□□□ -0.66
LIG3-213ENST00000590630 C4orf17Q53FE4 359 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 SPANXN4Q5MJ08 99 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 BICRALQ6AI39 1079 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 ARHGAP11AQ6P4F7 1023 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 WDR53Q7Z5U6 358 aaPredicted RBP10.9□□□□□ -0.66
LIG3-213ENST00000590630 GLB1L3Q8NCI6 653 aaPredicted RBP10.9□□□□□ -0.66
LIG3-213ENST00000590630 OR52N2Q8NGI0 321 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 GPR151Q8TDV0 419 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 EFHD2Q96C19 240 aaPredicted RBP10.9□□□□□ -0.66
LIG3-213ENST00000590630 NTNG2Q96CW9 530 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 TMEM41AQ96HV5 264 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 TEX37Q96LM6 180 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 JSRP1Q96MG2 331 aaPredicted RBP10.9□□□□□ -0.66
LIG3-213ENST00000590630 OR52B2Q96RD2 323 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 NODALQ96S42 347 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 ZBTB18Q99592 522 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 OSBPL11Q9BXB4 747 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 CXorf36Q9H7Y0 433 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 TCF7L2Q9NQB0 619 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 SDR39U1Q9NRG7 319 aaPredicted RBP10.9□□□□□ -0.66
LIG3-213ENST00000590630 GIN1Q9NXP7 522 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 QPCTLQ9NXS2 382 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 KLRF1Q9NZS2 232 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 SLC5A6Q9Y289 635 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 ZNF835Q9Y2P0 537 aa10.9□□□□□ -0.66
LIG3-213ENST00000590630 A0A1B0GUH1 482 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 CDC40O60508 579 aaKnown RBP eCLIP10.89□□□□□ -0.67
LIG3-213ENST00000590630 SCN2BO60939 215 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 ICOSLGO75144 302 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 SEMA7AO75326 666 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 SLC22A3O75751 556 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 IL33O95760 270 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 IGHG3P01860 377 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 PGRP06401 933 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 ALOX5P09917 674 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 ABOP16442 354 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 S100A3P33764 101 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 IDH3AP50213 366 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 AQP5P55064 265 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 NME5P56597 212 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 SRSF1Q07955 248 aaKnown RBP eCLIP10.89□□□□□ -0.67
LIG3-213ENST00000590630 LRRC74AQ0VAA2 488 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 TP53BP2Q13625 1128 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 SLC10A1Q14973 349 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 EXOSC6Q5RKV6 272 aaKnown RBP10.89□□□□□ -0.67
LIG3-213ENST00000590630 DESI1Q6ICB0 168 aa10.89□□□□□ -0.67
LIG3-213ENST00000590630 Q6ZPB1 254 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms