RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 SH3BP4Q9P0V3 963 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 GIMAP2Q9UG22 337 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 EXO1Q9UQ84 846 aaKnown RBP9.54□□□□□ -0.88
SDF2-208ENST00000589788 DTX4Q9Y2E6 619 aa9.54□□□□□ -0.88
SDF2-208ENST00000589788 BSNQ9UPA5 3926 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 DOPEY2Q9Y3R5 2298 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 TRGV8A0A0C4DH27 118 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 A0A0G2JMM0 328 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 A0A1B0GUH1 482 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 A0A1W2PPB8 328 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 A0A1W2PRS3 328 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 PINLYPA6NC86 204 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 FAM166BA8MTA8 275 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 KIR3DP1A8MWS1 328 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 ACOX3O15254 700 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 PDPK1O15530 556 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 HS6ST1O60243 411 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 PLOD3O60568 738 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 SLC19A2O60779 497 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 WISP2O76076 250 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 PRPS2P11908 318 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 ABOP16442 354 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 DRD5P21918 477 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 ABCD3P28288 659 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 RPL3P39023 403 aaKnown RBP9.53□□□□□ -0.88
SDF2-208ENST00000589788 PPICP45877 212 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 SEC24CP53992 1094 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 FBXW4P57775 412 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 PPIAP62937 165 aaKnown RBP9.53□□□□□ -0.88
SDF2-208ENST00000589788 PLCXD2Q0VAA5 305 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 ZNF155Q12901 538 aaPredicted RBP9.53□□□□□ -0.88
SDF2-208ENST00000589788 HSPB3Q12988 150 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 DUSP8Q13202 625 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 MAD2L1Q13257 205 aaPredicted RBP9.53□□□□□ -0.88
SDF2-208ENST00000589788 PRSS53Q2L4Q9 553 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 C6orf136Q5SQH8 315 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 PRAMEF20Q5VT98 475 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 C1QL3Q5VWW1 255 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 ANKRD26P1Q6NSI1 321 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 PAOXQ6QHF9 649 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 TMEM107Q6UX40 140 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 PRR22Q8IZ63 422 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 FAM169BQ8N8A8 192 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 SIMC1Q8NDZ2 872 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 OR7G2Q8NG99 324 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 PIWIL2Q8TC59 973 aaKnown RBP9.53□□□□□ -0.88
SDF2-208ENST00000589788 DIO2Q92813 273 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 MTERF3Q96E29 417 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 ZBED6CLQ96FA7 236 aaPredicted RBP9.53□□□□□ -0.88
SDF2-208ENST00000589788 ZNF764Q96H86 408 aaPredicted RBP9.53□□□□□ -0.88
SDF2-208ENST00000589788 PPP1R36Q96LQ0 422 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 JSRP1Q96MG2 331 aaPredicted RBP9.53□□□□□ -0.88
SDF2-208ENST00000589788 DOHHQ9BU89 302 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 C1orf50Q9BV19 199 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 TTTY12Q9BZ98 90 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 NSRP1Q9H0G5 558 aaKnown RBP9.53□□□□□ -0.88
SDF2-208ENST00000589788 GLIPR2Q9H4G4 154 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 IL1RL2Q9HB29 575 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 SH2D2AQ9NP31 389 aa9.53□□□□□ -0.88
SDF2-208ENST00000589788 DDX18Q9NVP1 670 aaKnown RBP9.53□□□□□ -0.88
SDF2-208ENST00000589788 ERRFI1Q9UJM3 462 aaPredicted RBP9.53□□□□□ -0.88
SDF2-208ENST00000589788 BOKQ9UMX3 212 aaPredicted RBP9.53□□□□□ -0.88
SDF2-208ENST00000589788 EIF3LQ9Y262 564 aaKnown RBP9.53□□□□□ -0.88
SDF2-208ENST00000589788 CHCHD2Q9Y6H1 151 aaPredicted RBP9.53□□□□□ -0.88
SDF2-208ENST00000589788 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.53□□□□□ -0.88
SDF2-208ENST00000589788 LRRK2Q5S007 2527 aa9.52□□□□□ -0.88
SDF2-208ENST00000589788 EXPH5Q8NEV8 1989 aa9.52□□□□□ -0.89
SDF2-208ENST00000589788 A0A087WV62 115 aa9.52□□□□□ -0.89
SDF2-208ENST00000589788 FRG2CA6NGY1 282 aa9.52□□□□□ -0.89
SDF2-208ENST00000589788 LRRTM2O43300 516 aa9.52□□□□□ -0.89
SDF2-208ENST00000589788 WIPF1O43516 503 aa9.52□□□□□ -0.89
SDF2-208ENST00000589788 TBX19O60806 448 aa9.52□□□□□ -0.89
SDF2-208ENST00000589788 ERN1O75460 977 aaKnown RBP9.52□□□□□ -0.89
SDF2-208ENST00000589788 PPM1BO75688 479 aa9.52□□□□□ -0.89
SDF2-208ENST00000589788 ATE1O95260 518 aa9.52□□□□□ -0.89
SDF2-208ENST00000589788 TGDSO95455 350 aa9.52□□□□□ -0.89
SDF2-208ENST00000589788 NAGAP17050 411 aa9.52□□□□□ -0.89
SDF2-208ENST00000589788 DRD4P21917 467 aa9.52□□□□□ -0.89
SDF2-208ENST00000589788 KRT20P35900 424 aa9.52□□□□□ -0.89
SDF2-208ENST00000589788 MC3RP41968 323 aa9.52□□□□□ -0.89
SDF2-208ENST00000589788 PSPHP78330 225 aa9.52□□□□□ -0.89
SDF2-208ENST00000589788 CBX1P83916 185 aa9.52□□□□□ -0.89
SDF2-208ENST00000589788 HSF1Q00613 529 aa9.52□□□□□ -0.89
SDF2-208ENST00000589788 IL23RQ5VWK5 629 aa9.52□□□□□ -0.89
SDF2-208ENST00000589788 ZNF551Q7Z340 670 aaPredicted RBP9.52□□□□□ -0.89
SDF2-208ENST00000589788 FJX1Q86VR8 437 aa9.52□□□□□ -0.89
SDF2-208ENST00000589788 SPPL2CQ8IUH8 684 aa9.52□□□□□ -0.89
SDF2-208ENST00000589788 SLC34A3Q8N130 599 aa9.52□□□□□ -0.89
SDF2-208ENST00000589788 OR52N2Q8NGI0 321 aa9.52□□□□□ -0.89
SDF2-208ENST00000589788 SPPL2AQ8TCT8 520 aa9.52□□□□□ -0.89
SDF2-208ENST00000589788 CIDECQ96AQ7 238 aaPredicted RBP9.52□□□□□ -0.89
SDF2-208ENST00000589788 OMA1Q96E52 524 aa9.52□□□□□ -0.89
SDF2-208ENST00000589788 BTBD9Q96Q07 612 aa9.52□□□□□ -0.89
SDF2-208ENST00000589788 SECISBP2Q96T21 854 aaKnown RBP9.52□□□□□ -0.89
SDF2-208ENST00000589788 PRPF18Q99633 342 aaKnown RBP9.52□□□□□ -0.89
SDF2-208ENST00000589788 DEFB127Q9H1M4 99 aa9.52□□□□□ -0.89
SDF2-208ENST00000589788 METTL7AQ9H8H3 244 aa9.52□□□□□ -0.89
SDF2-208ENST00000589788 FOLH1BQ9HBA9 442 aa9.52□□□□□ -0.89
SDF2-208ENST00000589788 TUBA8Q9NY65 449 aaPredicted RBP9.52□□□□□ -0.89
SDF2-208ENST00000589788 NOP53Q9NZM5 478 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 206.2 ms