RNA–Protein interactions for RNA: ENST00000589686.5

CIRBP-224, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-224ENST00000589686 HOXD4P09016 255 aaPredicted RBP19.21■□□□□ 0.67
CIRBP-224ENST00000589686 PRPS2P11908 318 aa19.21■□□□□ 0.67
CIRBP-224ENST00000589686 PTPN6P29350 595 aa19.21■□□□□ 0.67
CIRBP-224ENST00000589686 FRKP42685 505 aaPredicted RBP19.21■□□□□ 0.67
CIRBP-224ENST00000589686 KIRREL3Q8IZU9 778 aa19.21■□□□□ 0.67
CIRBP-224ENST00000589686 FNDC5Q8NAU1 212 aa19.21■□□□□ 0.67
CIRBP-224ENST00000589686 OR4N2Q8NGD1 307 aa19.21■□□□□ 0.67
CIRBP-224ENST00000589686 CA5BP1Q8WTZ4 195 aa19.21■□□□□ 0.67
CIRBP-224ENST00000589686 RND1Q92730 232 aa19.21■□□□□ 0.67
CIRBP-224ENST00000589686 SDCCAG3Q96C92 435 aa19.21■□□□□ 0.67
CIRBP-224ENST00000589686 TUBGCP3Q96CW5 907 aa19.21■□□□□ 0.67
CIRBP-224ENST00000589686 Q9N2J8 555 aa19.21■□□□□ 0.67
CIRBP-224ENST00000589686 ATP6V1HQ9UI12 483 aa19.21■□□□□ 0.67
CIRBP-224ENST00000589686 RAP2CQ9Y3L5 183 aa19.21■□□□□ 0.67
CIRBP-224ENST00000589686 NCKAP5O14513 1909 aa19.21■□□□□ 0.67
CIRBP-224ENST00000589686 SCAMP2O15127 329 aaKnown RBP19.2■□□□□ 0.66
CIRBP-224ENST00000589686 GABRA1P14867 456 aa19.2■□□□□ 0.66
CIRBP-224ENST00000589686 GRNP28799 593 aaKnown RBP19.2■□□□□ 0.66
CIRBP-224ENST00000589686 SLC1A6P48664 564 aa19.2■□□□□ 0.66
CIRBP-224ENST00000589686 PMPCAQ10713 525 aa19.2■□□□□ 0.66
CIRBP-224ENST00000589686 MAD2L1Q13257 205 aaPredicted RBP19.2■□□□□ 0.66
CIRBP-224ENST00000589686 TOMM20Q15388 145 aa19.2■□□□□ 0.66
CIRBP-224ENST00000589686 BEND6Q5SZJ8 279 aaPredicted RBP19.2■□□□□ 0.66
CIRBP-224ENST00000589686 IL23RQ5VWK5 629 aa19.2■□□□□ 0.66
CIRBP-224ENST00000589686 B3GNT6Q6ZMB0 384 aa19.2■□□□□ 0.66
CIRBP-224ENST00000589686 RPRMLQ8N4K4 120 aa19.2■□□□□ 0.66
CIRBP-224ENST00000589686 ZNF781Q8N8C0 355 aa19.2■□□□□ 0.66
CIRBP-224ENST00000589686 CEP70Q8NHQ1 597 aa19.2■□□□□ 0.66
CIRBP-224ENST00000589686 ASB5Q8WWX0 329 aa19.2■□□□□ 0.66
CIRBP-224ENST00000589686 EFHD2Q96C19 240 aaPredicted RBP19.2■□□□□ 0.66
CIRBP-224ENST00000589686 LMF2Q9BU23 707 aaKnown RBP19.2■□□□□ 0.66
CIRBP-224ENST00000589686 C1orf50Q9BV19 199 aa19.2■□□□□ 0.66
CIRBP-224ENST00000589686 ZNF395Q9H8N7 513 aaPredicted RBP19.2■□□□□ 0.66
CIRBP-224ENST00000589686 MRTO4Q9UKD2 239 aaKnown RBP19.2■□□□□ 0.66
CIRBP-224ENST00000589686 C15orf38-AP3S2A0A0A6YYH1 394 aa19.19■□□□□ 0.66
CIRBP-224ENST00000589686 C2orf72A6NCS6 295 aa19.19■□□□□ 0.66
CIRBP-224ENST00000589686 HNRNPRO43390 633 aaKnown RBP19.19■□□□□ 0.66
CIRBP-224ENST00000589686 CBR3O75828 277 aa19.19■□□□□ 0.66
CIRBP-224ENST00000589686 STX3Q13277 289 aa19.19■□□□□ 0.66
CIRBP-224ENST00000589686 GAB1Q13480 694 aa19.19■□□□□ 0.66
CIRBP-224ENST00000589686 CDSNQ15517 529 aa19.19■□□□□ 0.66
CIRBP-224ENST00000589686 DECR1Q16698 335 aa19.19■□□□□ 0.66
CIRBP-224ENST00000589686 HHATQ5VTY9 493 aa19.19■□□□□ 0.66
CIRBP-224ENST00000589686 PAIP2Q9BPZ3 127 aaKnown RBP19.19■□□□□ 0.66
CIRBP-224ENST00000589686 C3orf14Q9HBI5 128 aa19.19■□□□□ 0.66
CIRBP-224ENST00000589686 ALKBH4Q9NXW9 302 aa19.19■□□□□ 0.66
CIRBP-224ENST00000589686 NTMQ9P121 344 aa19.19■□□□□ 0.66
CIRBP-224ENST00000589686 CBLCQ9ULV8 474 aa19.19■□□□□ 0.66
CIRBP-224ENST00000589686 EIF3LQ9Y262 564 aaKnown RBP19.19■□□□□ 0.66
CIRBP-224ENST00000589686 CYP4B1P13584 511 aa19.18■□□□□ 0.66
CIRBP-224ENST00000589686 BGNP21810 368 aa19.18■□□□□ 0.66
CIRBP-224ENST00000589686 CHRNB4P30926 498 aa19.18■□□□□ 0.66
CIRBP-224ENST00000589686 PTGER4P35408 488 aa19.18■□□□□ 0.66
CIRBP-224ENST00000589686 RPL14P50914 215 aaKnown RBP19.18■□□□□ 0.66
CIRBP-224ENST00000589686 NUP107P57740 925 aa19.18■□□□□ 0.66
CIRBP-224ENST00000589686 PTGR1Q14914 329 aa19.18■□□□□ 0.66
CIRBP-224ENST00000589686 MLC1Q15049 377 aa19.18■□□□□ 0.66
CIRBP-224ENST00000589686 PDCD2Q16342 344 aaPredicted RBP19.18■□□□□ 0.66
CIRBP-224ENST00000589686 SMU1Q2TAY7 513 aa19.18■□□□□ 0.66
CIRBP-224ENST00000589686 VPS26BQ4G0F5 336 aa19.18■□□□□ 0.66
CIRBP-224ENST00000589686 C1orf185Q5T7R7 199 aa19.18■□□□□ 0.66
CIRBP-224ENST00000589686 RTL6Q6ICC9 239 aa19.18■□□□□ 0.66
CIRBP-224ENST00000589686 NATD1Q8N6N6 113 aa19.18■□□□□ 0.66
CIRBP-224ENST00000589686 WDSUB1Q8N9V3 476 aa19.18■□□□□ 0.66
CIRBP-224ENST00000589686 OR7A2PQ8NGA2 310 aa19.18■□□□□ 0.66
CIRBP-224ENST00000589686 RNF138Q8WVD3 245 aa19.18■□□□□ 0.66
CIRBP-224ENST00000589686 DTNBP1Q96EV8 351 aa19.18■□□□□ 0.66
CIRBP-224ENST00000589686 PRPF18Q99633 342 aaKnown RBP19.18■□□□□ 0.66
CIRBP-224ENST00000589686 TTYH2Q9BSA4 534 aa19.18■□□□□ 0.66
CIRBP-224ENST00000589686 C20orf27Q9GZN8 174 aa19.18■□□□□ 0.66
CIRBP-224ENST00000589686 RUBCNLQ9H714 662 aa19.18■□□□□ 0.66
CIRBP-224ENST00000589686 SERHLQ9NQF3 203 aa19.18■□□□□ 0.66
CIRBP-224ENST00000589686 ATAD3AQ9NVI7 634 aa19.18■□□□□ 0.66
CIRBP-224ENST00000589686 HAO1Q9UJM8 370 aa19.18■□□□□ 0.66
CIRBP-224ENST00000589686 MAPRE3Q9UPY8 281 aa19.18■□□□□ 0.66
CIRBP-224ENST00000589686 RNF6Q9Y252 685 aa19.18■□□□□ 0.66
CIRBP-224ENST00000589686 FAM215AQ9Y5M1 114 aa19.18■□□□□ 0.66
CIRBP-224ENST00000589686 WIF1Q9Y5W5 379 aa19.18■□□□□ 0.66
CIRBP-224ENST00000589686 PRPS1L1P21108 318 aa19.17■□□□□ 0.66
CIRBP-224ENST00000589686 GABRA3P34903 492 aa19.17■□□□□ 0.66
CIRBP-224ENST00000589686 PRKAG1P54619 331 aa19.17■□□□□ 0.66
CIRBP-224ENST00000589686 PSMD4P55036 377 aaKnown RBP19.17■□□□□ 0.66
CIRBP-224ENST00000589686 EMX2Q04743 252 aa19.17■□□□□ 0.66
CIRBP-224ENST00000589686 CRYZQ08257 329 aaKnown RBP19.17■□□□□ 0.66
CIRBP-224ENST00000589686 NHSL2Q5HYW2 709 aa19.17■□□□□ 0.66
CIRBP-224ENST00000589686 CPTPQ5TA50 214 aa19.17■□□□□ 0.66
CIRBP-224ENST00000589686 WDR53Q7Z5U6 358 aaPredicted RBP19.17■□□□□ 0.66
CIRBP-224ENST00000589686 PLCZ1Q86YW0 608 aa19.17■□□□□ 0.66
CIRBP-224ENST00000589686 PM20D2Q8IYS1 436 aa19.17■□□□□ 0.66
CIRBP-224ENST00000589686 ANKRD42Q8N9B4 389 aa19.17■□□□□ 0.66
CIRBP-224ENST00000589686 CDRT4Q8N9R6 151 aa19.17■□□□□ 0.66
CIRBP-224ENST00000589686 FAM83FQ8NEG4 500 aaPredicted RBP19.17■□□□□ 0.66
CIRBP-224ENST00000589686 NUP43Q8NFH3 380 aa19.17■□□□□ 0.66
CIRBP-224ENST00000589686 HOXB13Q92826 284 aaPredicted RBP19.17■□□□□ 0.66
CIRBP-224ENST00000589686 MARVELD3Q96A59 401 aa19.17■□□□□ 0.66
CIRBP-224ENST00000589686 SORT1Q99523 831 aa19.17■□□□□ 0.66
CIRBP-224ENST00000589686 TIMP4Q99727 224 aa19.17■□□□□ 0.66
CIRBP-224ENST00000589686 EQTNQ9NQ60 294 aa19.17■□□□□ 0.66
CIRBP-224ENST00000589686 NOP53Q9NZM5 478 aaKnown RBP19.17■□□□□ 0.66
CIRBP-224ENST00000589686 SLC6A5Q9Y345 797 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms