RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	AMER2	Q8N7J2	671 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	TMEM52	Q8NDY8	209 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	PIK3R3	Q92569	461 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	PIGK	Q92643	395 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	MARVELD3	Q96A59	401 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	ZHX1-C8orf76	Q96EF9	292 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	ZC3H10	Q96K80	434 aa	Known RBP	14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	APOL4	Q9BPW4	351 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	NXF2	Q9GZY0	626 aa	Known RBP	14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	CHRNA10	Q9GZZ6	450 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	DDX28	Q9NUL7	540 aa	Known RBP	14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	FKBP14	Q9NWM8	211 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	MS4A12	Q9NXJ0	267 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	KCNN3	Q9UGI6	736 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	ORC6	Q9Y5N6	252 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	METTL15	A6NJ78	407 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	TBX1	O43435	398 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	ZNF682	O95780	498 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	YES1	P07947	543 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	CSF2RB	P32927	897 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	GPC1	P35052	558 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	ETV6	P41212	452 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	GPR3	P46089	330 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	HTR3A	P46098	478 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	OR2B6	P58173	313 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	SIM1	P81133	766 aa	Predicted RBP	14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	PPP2R2B	Q00005	443 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	CDK6	Q00534	326 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	GPR19	Q15760	415 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	ZNF630	Q2M218	657 aa	Predicted RBP	14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	SPDYE7P	Q495Y7	208 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	SLC51B	Q86UW2	128 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	GATAD2A	Q86YP4	633 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	CA13	Q8N1Q1	262 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	DTWD2	Q8NBA8	298 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	FCGR1B	Q92637	280 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	ZDHHC12	Q96GR4	267 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	MBOAT4	Q96T53	435 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	CD180	Q99467	661 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	CCDC32	Q9BV29	185 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	CCDC90B	Q9GZT6	254 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	DUSP21	Q9H596	190 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	ZSCAN32	Q9NX65	697 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	NLGN3	Q9NZ94	848 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	RPS6KA6	Q9UK32	745 aa		14.43	□□□□□ -0.1
DDX39A-209	ENST00000589318	ADAMTS20	P59510	1910 aa		14.42	□□□□□ -0.1
DDX39A-209	ENST00000589318	TEX51	A0A1B0GUA7	166 aa		14.42	□□□□□ -0.1
DDX39A-209	ENST00000589318	LOC100130705	A0A1B0GUX0	176 aa		14.42	□□□□□ -0.1
DDX39A-209	ENST00000589318		A6NL46	340 aa		14.42	□□□□□ -0.1
DDX39A-209	ENST00000589318	SGK494	L7N484	410 aa		14.42	□□□□□ -0.1
DDX39A-209	ENST00000589318	HMGN4	O00479	90 aa		14.42	□□□□□ -0.1
DDX39A-209	ENST00000589318	ITGAM	P11215	1152 aa		14.42	□□□□□ -0.1
DDX39A-209	ENST00000589318	MPI	P34949	423 aa		14.42	□□□□□ -0.1
DDX39A-209	ENST00000589318	VBP1	P61758	197 aa		14.42	□□□□□ -0.1
DDX39A-209	ENST00000589318	TP53BP2	Q13625	1128 aa		14.42	□□□□□ -0.1
DDX39A-209	ENST00000589318	LTB4R	Q15722	352 aa		14.42	□□□□□ -0.1
DDX39A-209	ENST00000589318	CTU2	Q2VPK5	515 aa	Known RBP	14.42	□□□□□ -0.1
DDX39A-209	ENST00000589318	IQCC	Q4KMZ1	466 aa		14.42	□□□□□ -0.1
DDX39A-209	ENST00000589318	CEP78	Q5JTW2	689 aa		14.42	□□□□□ -0.1
DDX39A-209	ENST00000589318	ELMOD2	Q8IZ81	293 aa		14.42	□□□□□ -0.1
DDX39A-209	ENST00000589318	OR9A2	Q8NGT5	310 aa		14.42	□□□□□ -0.1
DDX39A-209	ENST00000589318	OR9A4	Q8NGU2	314 aa		14.42	□□□□□ -0.1
DDX39A-209	ENST00000589318	SFXN5	Q8TD22	340 aa		14.42	□□□□□ -0.1
DDX39A-209	ENST00000589318	SAP25	Q8TEE9	199 aa		14.42	□□□□□ -0.1
DDX39A-209	ENST00000589318	TBC1D20	Q96BZ9	403 aa		14.42	□□□□□ -0.1
DDX39A-209	ENST00000589318	HSH2D	Q96JZ2	352 aa		14.42	□□□□□ -0.1
DDX39A-209	ENST00000589318	TMEM246	Q9BRR3	403 aa		14.42	□□□□□ -0.1
DDX39A-209	ENST00000589318	IRF2BPL	Q9H1B7	796 aa		14.42	□□□□□ -0.1
DDX39A-209	ENST00000589318	A4GALT	Q9NPC4	353 aa		14.42	□□□□□ -0.1
DDX39A-209	ENST00000589318	ZCCHC3	Q9NUD5	404 aa	Known RBP	14.42	□□□□□ -0.1
DDX39A-209	ENST00000589318	CCDC59	Q9P031	241 aa	Known RBP	14.42	□□□□□ -0.1
DDX39A-209	ENST00000589318	FBXO4	Q9UKT5	387 aa		14.42	□□□□□ -0.1
DDX39A-209	ENST00000589318	PEX16	Q9Y5Y5	336 aa		14.42	□□□□□ -0.1
DDX39A-209	ENST00000589318	CCDC88C	Q9P219	2028 aa		14.42	□□□□□ -0.1
DDX39A-209	ENST00000589318	LY6G6E	A0A0G2JKS1	128 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	FOXS1	O43638	330 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	RDH16	O75452	317 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	SOX18	P35713	384 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	MLLT3	P42568	568 aa	Predicted RBP	14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	GALK2	Q01415	458 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	HLA-B	Q31612	363 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	TMEM236	Q5W0B7	351 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	XKRX	Q6PP77	449 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	TMEM107	Q6UX40	140 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	LSMEM1	Q8N8F7	131 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	ELP4	Q96EB1	424 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	IL1RAP	Q9NPH3	570 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	SEMA3G	Q9NS98	782 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	GIMAP4	Q9NUV9	329 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	SEMA5B	Q9P283	1151 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	PLCL2	Q9UPR0	1127 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	ZNF780B	Q9Y6R6	833 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318		U3KQA8	63 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	PRAMEF27	A3QJZ7	478 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	EFCAB9	A8MZ26	197 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318		H3BMH7	237 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	CCRL2	O00421	344 aa		14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	POLR1C	O15160	346 aa	Predicted RBP	14.41	□□□□□ -0.1
DDX39A-209	ENST00000589318	CST1	P01037	141 aa		14.41	□□□□□ -0.1

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms