RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 NTSR1P30989 418 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 GDI1P31150 447 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 TMED10P49755 219 aaKnown RBP6.95□□□□□ -1.3
ZNF540-206ENST00000589117 MLLT11Q13015 90 aaPredicted RBP6.95□□□□□ -1.3
ZNF540-206ENST00000589117 DNASE1L3Q13609 305 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 GINS1Q14691 196 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 MAPK11Q15759 364 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 ENTPD8Q5MY95 495 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 ATAT1Q5SQI0 421 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 ZNF793Q6ZN11 406 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 NRROSQ86YC3 692 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 NUP43Q8NFH3 380 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 ADAMTS15Q8TE58 950 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 ASB12Q8WXK4 309 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 KLK6Q92876 244 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 PPP1R14AQ96A00 147 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 OR5M11Q96RB7 305 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 SLC30A2Q9BRI3 323 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 CENPOQ9BU64 300 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 CCDC32Q9BV29 185 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 TSSK6Q9BXA6 273 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 ACTRT3Q9BYD9 372 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 ALOXE3Q9BYJ1 711 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 KCNK12Q9HB15 430 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 DNAJC27Q9NZQ0 273 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 PHF11Q9UIL8 331 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 STUB1Q9UNE7 303 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 ZFR2Q9UPR6 939 aaKnown RBP6.95□□□□□ -1.3
ZNF540-206ENST00000589117 ATG4BQ9Y4P1 393 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 DENND4AQ7Z401 1863 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 LRRK1Q38SD2 2015 aa6.95□□□□□ -1.3
ZNF540-206ENST00000589117 MN1Q10571 1320 aaPredicted RBP6.94□□□□□ -1.3
ZNF540-206ENST00000589117 TRBV23-1A0A0A0MS06 115 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 OR52A4PA6NMU1 304 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 M0R129 80 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 M0R3H8 397 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 HAT1O14929 419 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 PGRMC2O15173 223 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 ST8SIA5O15466 376 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 RGS5O15539 181 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 PRICKLE3O43900 615 aaPredicted RBP6.94□□□□□ -1.3
ZNF540-206ENST00000589117 TPST2O60704 377 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 B4GALT2O60909 372 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 AIFM1O95831 613 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 EIF2S1P05198 315 aaKnown RBP6.94□□□□□ -1.3
ZNF540-206ENST00000589117 ALOX12P18054 663 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 PRKAR1BP31321 381 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 FEN1P39748 380 aaKnown RBP6.94□□□□□ -1.3
ZNF540-206ENST00000589117 ETV6P41212 452 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 ZNF91Q05481 1191 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 RAB40BQ12829 278 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 CBX3Q13185 183 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 SUZ12Q15022 739 aaKnown RBP6.94□□□□□ -1.3
ZNF540-206ENST00000589117 LARS2Q15031 903 aaKnown RBP6.94□□□□□ -1.3
ZNF540-206ENST00000589117 INAVAQ3KP66 663 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 TMEM107Q6UX40 140 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 WASH2PQ6VEQ5 465 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 ZNF730Q6ZMV8 503 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 USP30Q70CQ3 517 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 IQCHQ86VS3 1027 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 RBM45Q8IUH3 476 aaKnown RBP6.94□□□□□ -1.3
ZNF540-206ENST00000589117 LYSMD2Q8IV50 215 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 PARP16Q8N5Y8 322 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 NANOGP1Q8N7R0 232 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 OR6T1Q8NGN1 323 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 PIGXQ8TBF5 258 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 OSTF1Q92882 214 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 ELP4Q96EB1 424 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 CHFRQ96EP1 664 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 LRR1Q96L50 414 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 OR2M4Q96R27 311 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 FUZQ9BT04 418 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 TAPBPLQ9BX59 468 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 ASPNQ9BXN1 380 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 SRMSQ9H3Y6 488 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 KLHL31Q9H511 634 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 MTHFD2LQ9H903 347 aaPredicted RBP6.94□□□□□ -1.3
ZNF540-206ENST00000589117 NLGN3Q9NZ94 848 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 DIMT1Q9UNQ2 313 aaKnown RBP6.94□□□□□ -1.3
ZNF540-206ENST00000589117 GSTK1Q9Y2Q3 226 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 SPACA6W5XKT8 324 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 TCF20Q9UGU0 1960 aaKnown RBP6.94□□□□□ -1.3
ZNF540-206ENST00000589117 ALG1L2C9J202 215 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 DSCR3O14972 297 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 ZSCAN9O15535 394 aaPredicted RBP6.94□□□□□ -1.3
ZNF540-206ENST00000589117 PRODHO43272 600 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 CYP7B1O75881 506 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 TSPAN19P0C672 248 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 F3P13726 295 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 ENDOUP21128 410 aaKnown RBP6.94□□□□□ -1.3
ZNF540-206ENST00000589117 MMP11P24347 488 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 TGFBR1P36897 503 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 ADH7P40394 386 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 EIF2B2P49770 351 aaKnown RBP6.94□□□□□ -1.3
ZNF540-206ENST00000589117 BTN3A2P78410 334 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 CDK5Q00535 292 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 IFITM3Q01628 133 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 TSPAN31Q12999 210 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 KIR2DS3Q14952 304 aa6.94□□□□□ -1.3
ZNF540-206ENST00000589117 GPR19Q15760 415 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms