RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 MINDY4Q4G0A6 757 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 DCST2Q5T1A1 773 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 C1orf189Q5VU69 101 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 AP1ARQ63HQ0 302 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 DHRS4L2Q6PKH6 230 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 FRRS1Q6ZNA5 592 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 WDR53Q7Z5U6 358 aaPredicted RBP11.23□□□□□ -0.61
CCBE1-203ENST00000589116 TMEM179BQ7Z7N9 219 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 ZNF605Q86T29 641 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 CHERPQ8IWX8 916 aaKnown RBP11.23□□□□□ -0.61
CCBE1-203ENST00000589116 TFAP2CQ92754 450 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 SDF2Q99470 211 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 AMBRA1Q9C0C7 1298 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 SAP130Q9H0E3 1048 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 MTHFD2LQ9H903 347 aaPredicted RBP11.23□□□□□ -0.61
CCBE1-203ENST00000589116 FOLH1BQ9HBA9 442 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 C14orf105Q9NVL8 296 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 IFT52Q9Y366 437 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 WDR45Q9Y484 360 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 PCDHGA8Q9Y5G5 932 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 HEMK1Q9Y5R4 338 aaPredicted RBP11.23□□□□□ -0.61
CCBE1-203ENST00000589116 U3KQV3 271 aa11.23□□□□□ -0.61
CCBE1-203ENST00000589116 SETXQ7Z333 2677 aaKnown RBP11.23□□□□□ -0.61
CCBE1-203ENST00000589116 TCRBV16S1A1N1A0A5B0 115 aa11.22□□□□□ -0.61
CCBE1-203ENST00000589116 H0YAE9 185 aa11.22□□□□□ -0.61
CCBE1-203ENST00000589116 STX11O75558 287 aa11.22□□□□□ -0.61
CCBE1-203ENST00000589116 LGI1O95970 557 aa11.22□□□□□ -0.61
CCBE1-203ENST00000589116 ALBP02768 609 aa11.22□□□□□ -0.61
CCBE1-203ENST00000589116 THBS1P07996 1170 aa11.22□□□□□ -0.61
CCBE1-203ENST00000589116 EMDP50402 254 aa11.22□□□□□ -0.61
CCBE1-203ENST00000589116 POU6F2P78424 691 aaPredicted RBP11.22□□□□□ -0.61
CCBE1-203ENST00000589116 SPIBQ01892 262 aa11.22□□□□□ -0.61
CCBE1-203ENST00000589116 ZNF267Q14586 743 aaPredicted RBP11.22□□□□□ -0.61
CCBE1-203ENST00000589116 ELAVL1Q15717 326 aaKnown RBP11.22□□□□□ -0.61
CCBE1-203ENST00000589116 SLC36A3Q495N2 470 aa11.22□□□□□ -0.61
CCBE1-203ENST00000589116 MFSD4BQ5TF39 518 aa11.22□□□□□ -0.61
CCBE1-203ENST00000589116 TYW3Q6IPR3 259 aaKnown RBP11.22□□□□□ -0.61
CCBE1-203ENST00000589116 COX15Q7KZN9 410 aa11.22□□□□□ -0.61
CCBE1-203ENST00000589116 CYP4Z1Q86W10 505 aa11.22□□□□□ -0.61
CCBE1-203ENST00000589116 CARM1Q86X55 608 aa11.22□□□□□ -0.61
CCBE1-203ENST00000589116 ZNF619Q8N2I2 560 aa11.22□□□□□ -0.61
CCBE1-203ENST00000589116 DHRSXQ8N5I4 330 aa11.22□□□□□ -0.61
CCBE1-203ENST00000589116 GPR151Q8TDV0 419 aa11.22□□□□□ -0.61
CCBE1-203ENST00000589116 FBXL20Q96IG2 436 aa11.22□□□□□ -0.61
CCBE1-203ENST00000589116 VSTM2LQ96N03 204 aa11.22□□□□□ -0.61
CCBE1-203ENST00000589116 CNPPD1Q9BV87 410 aa11.22□□□□□ -0.61
CCBE1-203ENST00000589116 PRODH2Q9UF12 536 aa11.22□□□□□ -0.61
CCBE1-203ENST00000589116 C3orf18Q9UK00 162 aa11.22□□□□□ -0.61
CCBE1-203ENST00000589116 KCND3Q9UK17 655 aa11.22□□□□□ -0.61
CCBE1-203ENST00000589116 ORC6Q9Y5N6 252 aa11.22□□□□□ -0.61
CCBE1-203ENST00000589116 LYVE1Q9Y5Y7 322 aa11.22□□□□□ -0.61
CCBE1-203ENST00000589116 ASCC3Q8N3C0 2202 aaKnown RBP11.21□□□□□ -0.61
CCBE1-203ENST00000589116 SEC16AO15027 2179 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 MAGEA13PA6NCF6 341 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 EFCAB7A8K855 629 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 C17orf105B2RV13 164 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 TNFRSF11BO00300 401 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 CDX4O14627 284 aaPredicted RBP11.21□□□□□ -0.61
CCBE1-203ENST00000589116 NME6O75414 186 aaPredicted RBP11.21□□□□□ -0.61
CCBE1-203ENST00000589116 ZIC2O95409 532 aaPredicted RBP11.21□□□□□ -0.61
CCBE1-203ENST00000589116 TIAF1O95411 115 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 TNNI3P19429 210 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 RPS4Y1P22090 263 aaKnown RBP11.21□□□□□ -0.61
CCBE1-203ENST00000589116 SSTR4P31391 388 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 CCKBRP32239 447 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 CAPGP40121 348 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 HMGA2P52926 109 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 RAD23AP54725 363 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 DCDP81605 110 aaKnown RBP11.21□□□□□ -0.61
CCBE1-203ENST00000589116 PSG6Q00889 435 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 NKAIN1Q4KMZ8 207 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 EIPR1Q53HC9 387 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 ZNF311Q5JNZ3 666 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 PWWP2BQ6NUJ5 590 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 NAXDQ8IW45 347 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 PEX5LQ8IYB4 626 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 HS3ST5Q8IZT8 346 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 KDF1Q8NAX2 398 aaPredicted RBP11.21□□□□□ -0.61
CCBE1-203ENST00000589116 PLPP5Q8NEB5 264 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 DOK4Q8TEW6 326 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 NR4A3Q92570 626 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 GATA6Q92908 595 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 CLIP3Q96DZ5 547 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 ART5Q96L15 291 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 RSPO3Q9BXY4 272 aaPredicted RBP11.21□□□□□ -0.61
CCBE1-203ENST00000589116 OR10A5Q9H207 317 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 KLHL28Q9NXS3 571 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 SLC13A4Q9UKG4 626 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 ACAD8Q9UKU7 415 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 ZNF232Q9UNY5 417 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 ERVK-19Q9WJR5 959 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 CFL2Q9Y281 166 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 TESMINQ9Y4I5 508 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 MAGED1Q9Y5V3 778 aaPredicted RBP11.21□□□□□ -0.61
CCBE1-203ENST00000589116 COL27A1Q8IZC6 1860 aaPredicted RBP11.21□□□□□ -0.61
CCBE1-203ENST00000589116 FRYQ5TBA9 3013 aa11.21□□□□□ -0.61
CCBE1-203ENST00000589116 ARRDC5A6NEK1 342 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 OR2W5A6NFC9 320 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 KIAA0513O60268 411 aa11.2□□□□□ -0.62
CCBE1-203ENST00000589116 BRINP1O60477 761 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms