RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 SPNS1Q9H2V7 528 aa5.4□□□□□ -1.54
SDF2-206ENST00000587788 OSGEPL1Q9H4B0 414 aa5.4□□□□□ -1.54
SDF2-206ENST00000587788 CXorf36Q9H7Y0 433 aa5.4□□□□□ -1.54
SDF2-206ENST00000587788 IL21RQ9HBE5 538 aa5.4□□□□□ -1.54
SDF2-206ENST00000587788 C3orf14Q9HBI5 128 aa5.4□□□□□ -1.54
SDF2-206ENST00000587788 FGF22Q9HCT0 170 aa5.4□□□□□ -1.54
SDF2-206ENST00000587788 BCL2L10Q9HD36 194 aa5.4□□□□□ -1.54
SDF2-206ENST00000587788 MRPS30Q9NP92 439 aaKnown RBP5.4□□□□□ -1.54
SDF2-206ENST00000587788 FZD3Q9NPG1 666 aa5.4□□□□□ -1.54
SDF2-206ENST00000587788 ACOT13Q9NPJ3 140 aa5.4□□□□□ -1.54
SDF2-206ENST00000587788 SLC35C2Q9NQQ7 365 aa5.4□□□□□ -1.54
SDF2-206ENST00000587788 ACER3Q9NUN7 267 aa5.4□□□□□ -1.54
SDF2-206ENST00000587788 FKBP14Q9NWM8 211 aa5.4□□□□□ -1.54
SDF2-206ENST00000587788 PAK1IP1Q9NWT1 392 aaPredicted RBP5.4□□□□□ -1.54
SDF2-206ENST00000587788 CLN6Q9NWW5 311 aa5.4□□□□□ -1.54
SDF2-206ENST00000587788 IMPAD1Q9NX62 359 aa5.4□□□□□ -1.54
SDF2-206ENST00000587788 CNOT2Q9NZN8 540 aaKnown RBP5.4□□□□□ -1.54
SDF2-206ENST00000587788 CALML5Q9NZT1 146 aa5.4□□□□□ -1.54
SDF2-206ENST00000587788 ERVK-18Q9QC07 812 aa5.4□□□□□ -1.54
SDF2-206ENST00000587788 P2RX2Q9UBL9 471 aa5.4□□□□□ -1.54
SDF2-206ENST00000587788 PSORS1C1Q9UIG5 152 aa5.4□□□□□ -1.54
SDF2-206ENST00000587788 PLAGL1Q9UM63 463 aa5.4□□□□□ -1.54
SDF2-206ENST00000587788 LIPT1Q9Y234 373 aa5.4□□□□□ -1.54
SDF2-206ENST00000587788 CA5BQ9Y2D0 317 aa5.4□□□□□ -1.54
SDF2-206ENST00000587788 SLC9A8Q9Y2E8 581 aa5.4□□□□□ -1.54
SDF2-206ENST00000587788 TESMINQ9Y4I5 508 aa5.4□□□□□ -1.54
SDF2-206ENST00000587788 PCDHGA6Q9Y5G7 932 aa5.4□□□□□ -1.54
SDF2-206ENST00000587788 ENTPD2Q9Y5L3 495 aa5.4□□□□□ -1.54
SDF2-206ENST00000587788 SNX8Q9Y5X2 465 aa5.4□□□□□ -1.54
SDF2-206ENST00000587788 CSNK1G3Q9Y6M4 447 aa5.4□□□□□ -1.54
SDF2-206ENST00000587788 A3GALT2U3KPV4 340 aa5.4□□□□□ -1.54
SDF2-206ENST00000587788 COL27A1Q8IZC6 1860 aaPredicted RBP5.4□□□□□ -1.55
SDF2-206ENST00000587788 PIEZO1Q92508 2521 aa5.4□□□□□ -1.55
SDF2-206ENST00000587788 PTPRZ1P23471 2315 aaPredicted RBP5.4□□□□□ -1.55
SDF2-206ENST00000587788 SPEGQ15772 3267 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 A0A1B0GVT2 93 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 IRGMA1A4Y4 181 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 GSAPA4D1B5 854 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 OR2A25A4D2G3 310 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 C4orf47A7E2U8 309 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 CLDN25C9JDP6 229 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 H0Y8X5 98 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 CASC3O15234 703 aaKnown RBP5.39□□□□□ -1.55
SDF2-206ENST00000587788 ASNA1O43681 348 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 PRICKLE3O43900 615 aaPredicted RBP5.39□□□□□ -1.55
SDF2-206ENST00000587788 PCDHGA12O60330 932 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 PFDN1O60925 122 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 CNOT3O75175 753 aaKnown RBP5.39□□□□□ -1.55
SDF2-206ENST00000587788 WBP4O75554 376 aaKnown RBP5.39□□□□□ -1.55
SDF2-206ENST00000587788 SOX30O94993 753 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 MFN2O95140 757 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 TBX6O95947 436 aaPredicted RBP5.39□□□□□ -1.55
SDF2-206ENST00000587788 VIPP01282 170 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 MT-ND2P03891 347 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 CDK1P06493 297 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 H1F0P07305 194 aaKnown RBP5.39□□□□□ -1.55
SDF2-206ENST00000587788 FHP07954 510 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 IFI6P09912 130 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 CYP4B1P13584 511 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 OSMP13725 252 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 CD247P20963 164 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 ZNF10P21506 573 aaPredicted RBP5.39□□□□□ -1.55
SDF2-206ENST00000587788 HIST1H1TP22492 207 aaPredicted RBP5.39□□□□□ -1.55
SDF2-206ENST00000587788 PSMB9P28065 219 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 MPIP34949 423 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 IFNGR2P38484 337 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 ACTR1BP42025 376 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 KCNJ5P48544 419 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 ENTPD1P49961 510 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 BMXP51813 675 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 LIMK1P53667 647 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 CRISP3P54108 245 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 ACTR1AP61163 376 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 RPS15AP62244 130 aaKnown RBP5.39□□□□□ -1.55
SDF2-206ENST00000587788 SNRPGP62308 76 aaKnown RBP5.39□□□□□ -1.55
SDF2-206ENST00000587788 RNF4P78317 190 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 PRR5P85299 388 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 ALDH6A1Q02252 535 aaKnown RBP5.39□□□□□ -1.55
SDF2-206ENST00000587788 EIF2B5Q13144 721 aaKnown RBP5.39□□□□□ -1.55
SDF2-206ENST00000587788 ILKQ13418 452 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 TP53BP2Q13625 1128 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 KIR2DS3Q14952 304 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 EXOC3L2Q2M3D2 409 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 TIMM50Q3ZCQ8 353 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 ANKRD39Q53RE8 183 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 MANEAQ5SRI9 462 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 NDUFAF5Q5TEU4 345 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 MEDAGQ5VYS4 303 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 RNLSQ5VYX0 342 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 ZNF770Q6IQ21 691 aaPredicted RBP5.39□□□□□ -1.55
SDF2-206ENST00000587788 ABHD17CQ6PCB6 329 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 TUBA3EQ6PEY2 450 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 C16orf87Q6PH81 154 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 CD300LDQ6UXZ3 194 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 Q6ZNX1 250 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 SLC16A12Q6ZSM3 486 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 BEND4Q6ZU67 534 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 SPATC1Q76KD6 591 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 ADCK2Q7Z695 626 aa5.39□□□□□ -1.55
SDF2-206ENST00000587788 TSEN54Q7Z6J9 526 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms