RNA–Protein interactions for RNA: ENST00000587637.2

SF3A2-203, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-203ENST00000587637 SHISA8B8ZZ34 492 aa15.21■□□□□ 0.03
SF3A2-203ENST00000587637 SEC14L5O43304 696 aa15.21■□□□□ 0.03
SF3A2-203ENST00000587637 GMFGO60234 142 aa15.21■□□□□ 0.03
SF3A2-203ENST00000587637 ZIC3O60481 467 aa15.21■□□□□ 0.03
SF3A2-203ENST00000587637 CBR3O75828 277 aa15.21■□□□□ 0.03
SF3A2-203ENST00000587637 DPP4P27487 766 aa15.21■□□□□ 0.03
SF3A2-203ENST00000587637 IL12BP29460 328 aa15.21■□□□□ 0.03
SF3A2-203ENST00000587637 GCKP35557 465 aa15.21■□□□□ 0.03
SF3A2-203ENST00000587637 HSD17B3P37058 310 aa15.21■□□□□ 0.03
SF3A2-203ENST00000587637 SUCLG1P53597 346 aaKnown RBP15.21■□□□□ 0.03
SF3A2-203ENST00000587637 ETF1P62495 437 aaKnown RBP15.21■□□□□ 0.03
SF3A2-203ENST00000587637 CLCQ05315 142 aa15.21■□□□□ 0.03
SF3A2-203ENST00000587637 SNTA1Q13424 505 aa15.21■□□□□ 0.03
SF3A2-203ENST00000587637 SF3B4Q15427 424 aaKnown RBP eCLIP15.21■□□□□ 0.038e-7■■■■■ 32.7
SF3A2-203ENST00000587637 SH2D4BQ5SQS7 431 aa15.21■□□□□ 0.03
SF3A2-203ENST00000587637 ZNF474Q6S9Z5 364 aaPredicted RBP15.21■□□□□ 0.03
SF3A2-203ENST00000587637 SLC44A2Q8IWA5 706 aaPredicted RBP15.21■□□□□ 0.03
SF3A2-203ENST00000587637 NOA1Q8NC60 698 aaKnown RBP15.21■□□□□ 0.03
SF3A2-203ENST00000587637 ZNF592Q92610 1267 aa15.21■□□□□ 0.03
SF3A2-203ENST00000587637 ZNF845Q96IR2 970 aaPredicted RBP15.21■□□□□ 0.03
SF3A2-203ENST00000587637 C18orf12Q96KH6 178 aa15.21■□□□□ 0.03
SF3A2-203ENST00000587637 DACH2Q96NX9 599 aa15.21■□□□□ 0.03
SF3A2-203ENST00000587637 MRPL57Q9BQC6 102 aaKnown RBP15.21■□□□□ 0.03
SF3A2-203ENST00000587637 NEUROD4Q9HD90 331 aa15.21■□□□□ 0.03
SF3A2-203ENST00000587637 TMEM216Q9P0N5 145 aa15.21■□□□□ 0.03
SF3A2-203ENST00000587637 MCM8Q9UJA3 840 aa15.21■□□□□ 0.03
SF3A2-203ENST00000587637 TMCO1Q9UM00 188 aa15.21■□□□□ 0.03
SF3A2-203ENST00000587637 JMJD1CQ15652 2540 aa15.21■□□□□ 0.03
SF3A2-203ENST00000587637 A8MXE2 369 aa15.2■□□□□ 0.02
SF3A2-203ENST00000587637 CDH16O75309 829 aa15.2■□□□□ 0.02
SF3A2-203ENST00000587637 GUCY1B2O75343 617 aa15.2■□□□□ 0.02
SF3A2-203ENST00000587637 INHBBP09529 407 aa15.2■□□□□ 0.02
SF3A2-203ENST00000587637 GCAP28676 217 aa15.2■□□□□ 0.02
SF3A2-203ENST00000587637 ADSLP30566 484 aaPredicted RBP15.2■□□□□ 0.02
SF3A2-203ENST00000587637 EVI2BP34910 448 aa15.2■□□□□ 0.02
SF3A2-203ENST00000587637 MC3RP41968 323 aa15.2■□□□□ 0.02
SF3A2-203ENST00000587637 NKX6-1P78426 367 aaPredicted RBP15.2■□□□□ 0.02
SF3A2-203ENST00000587637 BTKQ06187 659 aa15.2■□□□□ 0.02
SF3A2-203ENST00000587637 RAET1LQ5VY80 246 aa15.2■□□□□ 0.02
SF3A2-203ENST00000587637 CLEC9AQ6UXN8 241 aa15.2■□□□□ 0.02
SF3A2-203ENST00000587637 C22orf34Q6ZV56 151 aa15.2■□□□□ 0.02
SF3A2-203ENST00000587637 P4HA3Q7Z4N8 544 aa15.2■□□□□ 0.02
SF3A2-203ENST00000587637 BTLAQ7Z6A9 289 aa15.2■□□□□ 0.02
SF3A2-203ENST00000587637 BIVMQ86UB2 503 aa15.2■□□□□ 0.02
SF3A2-203ENST00000587637 OR4K17Q8NGC6 315 aa15.2■□□□□ 0.02
SF3A2-203ENST00000587637 C16orf78Q8WTQ4 265 aa15.2■□□□□ 0.02
SF3A2-203ENST00000587637 SMPDL3BQ92485 455 aa15.2■□□□□ 0.02
SF3A2-203ENST00000587637 ANP32BQ92688 251 aaKnown RBP15.2■□□□□ 0.02
SF3A2-203ENST00000587637 TMCO6Q96DC7 493 aa15.2■□□□□ 0.02
SF3A2-203ENST00000587637 STARD4Q96DR4 205 aa15.2■□□□□ 0.02
SF3A2-203ENST00000587637 PIK3IP1Q96FE7 263 aa15.2■□□□□ 0.02
SF3A2-203ENST00000587637 ZC3HAV1LQ96H79 300 aaKnown RBP15.2■□□□□ 0.02
SF3A2-203ENST00000587637 WFIKKN1Q96NZ8 548 aa15.2■□□□□ 0.02
SF3A2-203ENST00000587637 UCN2Q96RP3 112 aa15.2■□□□□ 0.02
SF3A2-203ENST00000587637 C1QTNF3Q9BXJ4 246 aa15.2■□□□□ 0.02
SF3A2-203ENST00000587637 DSN1Q9H410 356 aa15.2■□□□□ 0.02
SF3A2-203ENST00000587637 UBTD1Q9HAC8 227 aa15.2■□□□□ 0.02
SF3A2-203ENST00000587637 VPS29Q9UBQ0 182 aa15.2■□□□□ 0.02
SF3A2-203ENST00000587637 TIMM22Q9Y584 194 aa15.2■□□□□ 0.02
SF3A2-203ENST00000587637 CSPG4Q6UVK1 2322 aa15.2■□□□□ 0.02
SF3A2-203ENST00000587637 GNG14A0A1W2PPG7 69 aa15.19■□□□□ 0.02
SF3A2-203ENST00000587637 DLX3O60479 287 aa15.19■□□□□ 0.02
SF3A2-203ENST00000587637 SUPT7LO94864 414 aa15.19■□□□□ 0.02
SF3A2-203ENST00000587637 FOSL1P15407 271 aa15.19■□□□□ 0.02
SF3A2-203ENST00000587637 TIA1P31483 386 aaKnown RBP eCLIP15.19■□□□□ 0.02
SF3A2-203ENST00000587637 FOXA1P55317 472 aa15.19■□□□□ 0.02
SF3A2-203ENST00000587637 ZNF678Q5SXM1 525 aa15.19■□□□□ 0.02
SF3A2-203ENST00000587637 C10orf62Q5T681 223 aaPredicted RBP15.19■□□□□ 0.02
SF3A2-203ENST00000587637 TMEM107Q6UX40 140 aa15.19■□□□□ 0.02
SF3A2-203ENST00000587637 GPRIN3Q6ZVF9 776 aa15.19■□□□□ 0.02
SF3A2-203ENST00000587637 FAM9CQ8IZT9 166 aa15.19■□□□□ 0.02
SF3A2-203ENST00000587637 OR2M3Q8NG83 312 aa15.19■□□□□ 0.02
SF3A2-203ENST00000587637 MTBPQ96DY7 904 aa15.19■□□□□ 0.02
SF3A2-203ENST00000587637 ZFP3Q96NJ6 502 aa15.19■□□□□ 0.02
SF3A2-203ENST00000587637 FAM111AQ96PZ2 611 aa15.19■□□□□ 0.02
SF3A2-203ENST00000587637 ZNF382Q96SR6 550 aa15.19■□□□□ 0.02
SF3A2-203ENST00000587637 PIGMQ9H3S5 423 aa15.19■□□□□ 0.02
SF3A2-203ENST00000587637 ZNF395Q9H8N7 513 aaPredicted RBP15.19■□□□□ 0.02
SF3A2-203ENST00000587637 BEX4Q9NWD9 120 aaPredicted RBP15.19■□□□□ 0.02
SF3A2-203ENST00000587637 MED11Q9P086 117 aa15.19■□□□□ 0.02
SF3A2-203ENST00000587637 PPP4R1LQ9P1A2 415 aa15.19■□□□□ 0.02
SF3A2-203ENST00000587637 USF3Q68DE3 2245 aa15.19■□□□□ 0.02
SF3A2-203ENST00000587637 TRIM64A6NGJ6 449 aa15.18■□□□□ 0.02
SF3A2-203ENST00000587637 TRIM64BA6NI03 449 aa15.18■□□□□ 0.02
SF3A2-203ENST00000587637 SLC22A20A6NK97 555 aa15.18■□□□□ 0.02
SF3A2-203ENST00000587637 H3BML4 177 aa15.18■□□□□ 0.02
SF3A2-203ENST00000587637 H7C1Q1 480 aa15.18■□□□□ 0.02
SF3A2-203ENST00000587637 SMAD7O15105 426 aaKnown RBP15.18■□□□□ 0.02
SF3A2-203ENST00000587637 JUNP05412 331 aaKnown RBP15.18■□□□□ 0.02
SF3A2-203ENST00000587637 HK1P19367 917 aa15.18■□□□□ 0.02
SF3A2-203ENST00000587637 HMOX2P30519 316 aa15.18■□□□□ 0.02
SF3A2-203ENST00000587637 KIR2DL2P43627 348 aaPredicted RBP15.18■□□□□ 0.02
SF3A2-203ENST00000587637 RFX3P48380 749 aa15.18■□□□□ 0.02
SF3A2-203ENST00000587637 SERPINB9P50453 376 aa15.18■□□□□ 0.02
SF3A2-203ENST00000587637 CLDN20P56880 219 aa15.18■□□□□ 0.02
SF3A2-203ENST00000587637 TRA2BP62995 288 aaKnown RBP15.18■□□□□ 0.02
SF3A2-203ENST00000587637 PSG6Q00889 435 aa15.18■□□□□ 0.02
SF3A2-203ENST00000587637 CSTF3Q12996 717 aaKnown RBP15.18■□□□□ 0.02
SF3A2-203ENST00000587637 ERCC6LQ2NKX8 1250 aa15.18■□□□□ 0.02
SF3A2-203ENST00000587637 AAGABQ6PD74 315 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms