RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 SNX24Q9Y343 169 aa12.72□□□□□ -0.37
CXXC1-208ENST00000587170 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.71□□□□□ -0.378e-7■■■■□ 25.7
CXXC1-208ENST00000587170 A0A087X1B8 175 aa12.71□□□□□ -0.37
CXXC1-208ENST00000587170 LINC01387J3KSC0 135 aa12.71□□□□□ -0.37
CXXC1-208ENST00000587170 PNLIPRP2P54317 469 aa12.71□□□□□ -0.37
CXXC1-208ENST00000587170 EEFSECP57772 596 aaKnown RBP12.71□□□□□ -0.37
CXXC1-208ENST00000587170 SIRPAP78324 504 aa12.71□□□□□ -0.37
CXXC1-208ENST00000587170 MRPS35P82673 323 aaKnown RBP12.71□□□□□ -0.37
CXXC1-208ENST00000587170 DMTNQ08495 405 aa12.71□□□□□ -0.37
CXXC1-208ENST00000587170 GANABQ14697 944 aaKnown RBP12.71□□□□□ -0.37
CXXC1-208ENST00000587170 LTB4RQ15722 352 aa12.71□□□□□ -0.37
CXXC1-208ENST00000587170 CHMP1BQ7LBR1 199 aa12.71□□□□□ -0.37
CXXC1-208ENST00000587170 CTAGE3PQ8IX95 158 aa12.71□□□□□ -0.37
CXXC1-208ENST00000587170 METTL25Q8N6Q8 603 aa12.71□□□□□ -0.37
CXXC1-208ENST00000587170 KLHL29Q96CT2 875 aa12.71□□□□□ -0.37
CXXC1-208ENST00000587170 CDK15Q96Q40 435 aa12.71□□□□□ -0.37
CXXC1-208ENST00000587170 ADOQ96SZ5 270 aa12.71□□□□□ -0.37
CXXC1-208ENST00000587170 SVEP1Q4LDE5 3571 aa12.7□□□□□ -0.38
CXXC1-208ENST00000587170 HMX2A2RU54 273 aa12.7□□□□□ -0.38
CXXC1-208ENST00000587170 C17orf51A8MQB3 221 aa12.7□□□□□ -0.38
CXXC1-208ENST00000587170 HS3ST1O14792 307 aa12.7□□□□□ -0.38
CXXC1-208ENST00000587170 ERAL1O75616 437 aaKnown RBP12.7□□□□□ -0.38
CXXC1-208ENST00000587170 REM1O75628 298 aa12.7□□□□□ -0.38
CXXC1-208ENST00000587170 BCAS2O75934 225 aaPredicted RBP12.7□□□□□ -0.38
CXXC1-208ENST00000587170 FCGR2AP12318 317 aa12.7□□□□□ -0.38
CXXC1-208ENST00000587170 TBXA2RP21731 343 aa12.7□□□□□ -0.38
CXXC1-208ENST00000587170 DEKP35659 375 aaKnown RBP12.7□□□□□ -0.38
CXXC1-208ENST00000587170 SUCLG1P53597 346 aaKnown RBP12.7□□□□□ -0.38
CXXC1-208ENST00000587170 NR1H2P55055 460 aa12.7□□□□□ -0.38
CXXC1-208ENST00000587170 CORO7P57737 925 aa12.7□□□□□ -0.38
CXXC1-208ENST00000587170 TNK1Q13470 666 aa12.7□□□□□ -0.38
CXXC1-208ENST00000587170 ETFDHQ16134 617 aa12.7□□□□□ -0.38
CXXC1-208ENST00000587170 TECRLQ5HYJ1 363 aa12.7□□□□□ -0.38
CXXC1-208ENST00000587170 OR5M10Q6IEU7 315 aa12.7□□□□□ -0.38
CXXC1-208ENST00000587170 NPSR1Q6W5P4 371 aa12.7□□□□□ -0.38
CXXC1-208ENST00000587170 FAM214BQ7L5A3 538 aa12.7□□□□□ -0.38
CXXC1-208ENST00000587170 PHC2Q8IXK0 858 aa12.7□□□□□ -0.38
CXXC1-208ENST00000587170 UBQLNLQ8IYU4 475 aa12.7□□□□□ -0.38
CXXC1-208ENST00000587170 PPM1NQ8N819 430 aa12.7□□□□□ -0.38
CXXC1-208ENST00000587170 ZNF610Q8N9Z0 462 aa12.7□□□□□ -0.38
CXXC1-208ENST00000587170 OR2M3Q8NG83 312 aa12.7□□□□□ -0.38
CXXC1-208ENST00000587170 FNDC9Q8TBE3 224 aa12.7□□□□□ -0.38
CXXC1-208ENST00000587170 TM4SF18Q96CE8 201 aa12.7□□□□□ -0.38
CXXC1-208ENST00000587170 ZC3HAV1LQ96H79 300 aaKnown RBP12.7□□□□□ -0.38
CXXC1-208ENST00000587170 PINK1Q9BXM7 581 aa12.7□□□□□ -0.38
CXXC1-208ENST00000587170 NOL11Q9H8H0 719 aaKnown RBP12.7□□□□□ -0.38
CXXC1-208ENST00000587170 BRF2Q9HAW0 419 aa12.7□□□□□ -0.38
CXXC1-208ENST00000587170 ZBTB26Q9HCK0 441 aa12.7□□□□□ -0.38
CXXC1-208ENST00000587170 GRHL1Q9NZI5 618 aa12.7□□□□□ -0.38
CXXC1-208ENST00000587170 PCTPQ9UKL6 214 aa12.7□□□□□ -0.38
CXXC1-208ENST00000587170 PSME2Q9UL46 239 aa12.7□□□□□ -0.38
CXXC1-208ENST00000587170 H0YC42 278 aa12.69□□□□□ -0.38
CXXC1-208ENST00000587170 KLHL2O95198 593 aa12.69□□□□□ -0.38
CXXC1-208ENST00000587170 C2P06681 752 aa12.69□□□□□ -0.38
CXXC1-208ENST00000587170 THBS1P07996 1170 aa12.69□□□□□ -0.38
CXXC1-208ENST00000587170 STX2P32856 288 aa12.69□□□□□ -0.38
CXXC1-208ENST00000587170 EVI2BP34910 448 aa12.69□□□□□ -0.38
CXXC1-208ENST00000587170 KCNJ5P48544 419 aa12.69□□□□□ -0.38
CXXC1-208ENST00000587170 CCNG1P51959 295 aa12.69□□□□□ -0.38
CXXC1-208ENST00000587170 TPD52P55327 224 aaPredicted RBP12.69□□□□□ -0.38
CXXC1-208ENST00000587170 ATP5J2P56134 94 aa12.69□□□□□ -0.38
CXXC1-208ENST00000587170 TRA2BP62995 288 aaKnown RBP12.69□□□□□ -0.38
CXXC1-208ENST00000587170 CALCOCO2Q13137 446 aa12.69□□□□□ -0.38
CXXC1-208ENST00000587170 ADAM5Q6NVV9 412 aa12.69□□□□□ -0.38
CXXC1-208ENST00000587170 STAC2Q6ZMT1 411 aa12.69□□□□□ -0.38
CXXC1-208ENST00000587170 LARP4Q71RC2 724 aaKnown RBP eCLIP12.69□□□□□ -0.38
CXXC1-208ENST00000587170 OR4K17Q8NGC6 315 aa12.69□□□□□ -0.38
CXXC1-208ENST00000587170 OR6K3Q8NGY3 331 aa12.69□□□□□ -0.38
CXXC1-208ENST00000587170 ERP44Q9BS26 406 aa12.69□□□□□ -0.38
CXXC1-208ENST00000587170 OR10A4Q9H209 315 aa12.69□□□□□ -0.38
CXXC1-208ENST00000587170 PROCRQ9UNN8 238 aa12.69□□□□□ -0.38
CXXC1-208ENST00000587170 ABCG2Q9UNQ0 655 aa12.69□□□□□ -0.38
CXXC1-208ENST00000587170 ZNF337Q9Y3M9 751 aa12.69□□□□□ -0.38
CXXC1-208ENST00000587170 OR2M5A3KFT3 312 aa12.68□□□□□ -0.38
CXXC1-208ENST00000587170 STX16-NPEPL1H3BU86 382 aa12.68□□□□□ -0.38
CXXC1-208ENST00000587170 OVOL3O00110 214 aa12.68□□□□□ -0.38
CXXC1-208ENST00000587170 STX16O14662 325 aa12.68□□□□□ -0.38
CXXC1-208ENST00000587170 ZSCAN12O43309 604 aa12.68□□□□□ -0.38
CXXC1-208ENST00000587170 TLX2O43763 284 aaPredicted RBP12.68□□□□□ -0.38
CXXC1-208ENST00000587170 FADS1O60427 444 aa12.68□□□□□ -0.38
CXXC1-208ENST00000587170 ALDOAP04075 364 aaKnown RBP12.68□□□□□ -0.38
CXXC1-208ENST00000587170 CTAGE8P0CG41 777 aa12.68□□□□□ -0.38
CXXC1-208ENST00000587170 NID1P14543 1247 aa12.68□□□□□ -0.38
CXXC1-208ENST00000587170 IL11P20809 199 aa12.68□□□□□ -0.38
CXXC1-208ENST00000587170 TCEA1P23193 301 aaKnown RBP12.68□□□□□ -0.38
CXXC1-208ENST00000587170 IL12BP29460 328 aa12.68□□□□□ -0.38
CXXC1-208ENST00000587170 CLDN20P56880 219 aa12.68□□□□□ -0.38
CXXC1-208ENST00000587170 MRPS22P82650 360 aaKnown RBP12.68□□□□□ -0.38
CXXC1-208ENST00000587170 IFT88Q13099 833 aa12.68□□□□□ -0.38
CXXC1-208ENST00000587170 PON3Q15166 354 aa12.68□□□□□ -0.38
CXXC1-208ENST00000587170 TMEM44Q2T9K0 475 aa12.68□□□□□ -0.38
CXXC1-208ENST00000587170 RAET1LQ5VY80 246 aa12.68□□□□□ -0.38
CXXC1-208ENST00000587170 KLC3Q6P597 504 aa12.68□□□□□ -0.38
CXXC1-208ENST00000587170 DNM1P46Q6ZS02 220 aa12.68□□□□□ -0.38
CXXC1-208ENST00000587170 GGNQ86UU5 652 aa12.68□□□□□ -0.38
CXXC1-208ENST00000587170 CTAGE4Q8IX94 777 aa12.68□□□□□ -0.38
CXXC1-208ENST00000587170 PTGR2Q8N8N7 351 aaPredicted RBP12.68□□□□□ -0.38
CXXC1-208ENST00000587170 FAIM2Q9BWQ8 316 aa12.68□□□□□ -0.38
CXXC1-208ENST00000587170 ANKRA2Q9H9E1 313 aa12.68□□□□□ -0.38
CXXC1-208ENST00000587170 FOLH1BQ9HBA9 442 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms