RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 SLC12A4Q9UP95 1085 aa10.71□□□□□ -0.69
BRCA1-225ENST00000586385 TNPO3Q9Y5L0 923 aaKnown RBP10.71□□□□□ -0.69
BRCA1-225ENST00000586385 GOLGA6L10A6NI86 522 aa10.7□□□□□ -0.7
BRCA1-225ENST00000586385 C16orf97H3BN30 126 aa10.7□□□□□ -0.7
BRCA1-225ENST00000586385 EMC8O43402 210 aa10.7□□□□□ -0.7
BRCA1-225ENST00000586385 KLF4O43474 513 aa10.7□□□□□ -0.7
BRCA1-225ENST00000586385 SOX30O94993 753 aa10.7□□□□□ -0.7
BRCA1-225ENST00000586385 PLAUP00749 431 aa10.7□□□□□ -0.7
BRCA1-225ENST00000586385 PDYNP01213 254 aa10.7□□□□□ -0.7
BRCA1-225ENST00000586385 NID1P14543 1247 aa10.7□□□□□ -0.7
BRCA1-225ENST00000586385 POU2F1P14859 743 aa10.7□□□□□ -0.7
BRCA1-225ENST00000586385 STX2P32856 288 aa10.7□□□□□ -0.7
BRCA1-225ENST00000586385 CCNG1P51959 295 aa10.7□□□□□ -0.7
BRCA1-225ENST00000586385 PLTPP55058 493 aa10.7□□□□□ -0.7
BRCA1-225ENST00000586385 CLDN20P56880 219 aa10.7□□□□□ -0.7
BRCA1-225ENST00000586385 GNG11P61952 73 aa10.7□□□□□ -0.7
BRCA1-225ENST00000586385 CALCOCO2Q13137 446 aa10.7□□□□□ -0.7
BRCA1-225ENST00000586385 NAB1Q13506 487 aa10.7□□□□□ -0.7
BRCA1-225ENST00000586385 PRSS53Q2L4Q9 553 aa10.7□□□□□ -0.7
BRCA1-225ENST00000586385 GGTA1PQ4G0N0 100 aa10.7□□□□□ -0.7
BRCA1-225ENST00000586385 PAGE2Q7Z2X7 111 aa10.7□□□□□ -0.7
BRCA1-225ENST00000586385 OR2M3Q8NG83 312 aa10.7□□□□□ -0.7
BRCA1-225ENST00000586385 OR5M1Q8NGP8 315 aa10.7□□□□□ -0.7
BRCA1-225ENST00000586385 OR9A2Q8NGT5 310 aa10.7□□□□□ -0.7
BRCA1-225ENST00000586385 FNDC9Q8TBE3 224 aa10.7□□□□□ -0.7
BRCA1-225ENST00000586385 KAT2AQ92830 837 aa10.7□□□□□ -0.7
BRCA1-225ENST00000586385 TMCO6Q96DC7 493 aa10.7□□□□□ -0.7
BRCA1-225ENST00000586385 MRRFQ96E11 262 aaKnown RBP10.7□□□□□ -0.7
BRCA1-225ENST00000586385 ZNF845Q96IR2 970 aaPredicted RBP10.7□□□□□ -0.7
BRCA1-225ENST00000586385 HBEGFQ99075 208 aa10.7□□□□□ -0.7
BRCA1-225ENST00000586385 NAPGQ99747 312 aaPredicted RBP10.7□□□□□ -0.7
BRCA1-225ENST00000586385 REPIN1Q9BWE0 567 aaKnown RBP10.7□□□□□ -0.7
BRCA1-225ENST00000586385 ELOVL5Q9NYP7 299 aa10.7□□□□□ -0.7
BRCA1-225ENST00000586385 ZNF226Q9NYT6 803 aa10.7□□□□□ -0.7
BRCA1-225ENST00000586385 PRODH2Q9UF12 536 aa10.7□□□□□ -0.7
BRCA1-225ENST00000586385 ZNF337Q9Y3M9 751 aa10.7□□□□□ -0.7
BRCA1-225ENST00000586385 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.69□□□□□ -0.7
BRCA1-225ENST00000586385 FADS1O60427 444 aa10.69□□□□□ -0.7
BRCA1-225ENST00000586385 ABCB7O75027 752 aa10.69□□□□□ -0.7
BRCA1-225ENST00000586385 AQP8O94778 261 aa10.69□□□□□ -0.7
BRCA1-225ENST00000586385 RPS17P08708 135 aaKnown RBP10.69□□□□□ -0.7
BRCA1-225ENST00000586385 SBK3P0C264 359 aa10.69□□□□□ -0.7
BRCA1-225ENST00000586385 CD8BP10966 210 aa10.69□□□□□ -0.7
BRCA1-225ENST00000586385 CHN1P15882 459 aa10.69□□□□□ -0.7
BRCA1-225ENST00000586385 TSPAN8P19075 237 aa10.69□□□□□ -0.7
BRCA1-225ENST00000586385 DEKP35659 375 aaKnown RBP10.69□□□□□ -0.7
BRCA1-225ENST00000586385 MAGEA12P43365 314 aa10.69□□□□□ -0.7
BRCA1-225ENST00000586385 SLC6A8P48029 635 aa10.69□□□□□ -0.7
BRCA1-225ENST00000586385 RAE1P78406 368 aaKnown RBP10.69□□□□□ -0.7
BRCA1-225ENST00000586385 IFT88Q13099 833 aa10.69□□□□□ -0.7
BRCA1-225ENST00000586385 TCHHL1Q5QJ38 904 aaPredicted RBP10.69□□□□□ -0.7
BRCA1-225ENST00000586385 OR2A2Q6IF42 318 aa10.69□□□□□ -0.7
BRCA1-225ENST00000586385 SCIMPQ6UWF3 145 aa10.69□□□□□ -0.7
BRCA1-225ENST00000586385 LARP4Q71RC2 724 aaKnown RBP eCLIP10.69□□□□□ -0.7
BRCA1-225ENST00000586385 P4HA3Q7Z4N8 544 aa10.69□□□□□ -0.7
BRCA1-225ENST00000586385 CCDC91Q7Z6B0 441 aa10.69□□□□□ -0.7
BRCA1-225ENST00000586385 CCDC25Q86WR0 208 aa10.69□□□□□ -0.7
BRCA1-225ENST00000586385 CCDC116Q8IYX3 515 aa10.69□□□□□ -0.7
BRCA1-225ENST00000586385 TMEM151AQ8N4L1 468 aa10.69□□□□□ -0.7
BRCA1-225ENST00000586385 C1orf52Q8N6N3 182 aaKnown RBP10.69□□□□□ -0.7
BRCA1-225ENST00000586385 LRRN4CLQ8ND94 238 aa10.69□□□□□ -0.7
BRCA1-225ENST00000586385 ATP6V1E2Q96A05 226 aa10.69□□□□□ -0.7
BRCA1-225ENST00000586385 EFHD2Q96C19 240 aaPredicted RBP10.69□□□□□ -0.7
BRCA1-225ENST00000586385 PINK1Q9BXM7 581 aa10.69□□□□□ -0.7
BRCA1-225ENST00000586385 DSN1Q9H410 356 aa10.69□□□□□ -0.7
BRCA1-225ENST00000586385 FOLH1BQ9HBA9 442 aa10.69□□□□□ -0.7
BRCA1-225ENST00000586385 AHSPQ9NZD4 102 aa10.69□□□□□ -0.7
BRCA1-225ENST00000586385 UTS2RQ9UKP6 389 aa10.69□□□□□ -0.7
BRCA1-225ENST00000586385 DSCAMO60469 2012 aa10.68□□□□□ -0.7
BRCA1-225ENST00000586385 PRR14LQ5THK1 2151 aa10.68□□□□□ -0.7
BRCA1-225ENST00000586385 OR2M5A3KFT3 312 aa10.68□□□□□ -0.7
BRCA1-225ENST00000586385 STX16-NPEPL1H3BU86 382 aa10.68□□□□□ -0.7
BRCA1-225ENST00000586385 STX16O14662 325 aa10.68□□□□□ -0.7
BRCA1-225ENST00000586385 SCO2O43819 266 aa10.68□□□□□ -0.7
BRCA1-225ENST00000586385 CRLF1O75462 422 aa10.68□□□□□ -0.7
BRCA1-225ENST00000586385 TNFRSF21O75509 655 aa10.68□□□□□ -0.7
BRCA1-225ENST00000586385 PEPDP12955 493 aa10.68□□□□□ -0.7
BRCA1-225ENST00000586385 EVI2BP34910 448 aa10.68□□□□□ -0.7
BRCA1-225ENST00000586385 ARL1P40616 181 aaPredicted RBP10.68□□□□□ -0.7
BRCA1-225ENST00000586385 PAFAH1B1P43034 410 aa10.68□□□□□ -0.7
BRCA1-225ENST00000586385 ALDH9A1P49189 494 aa10.68□□□□□ -0.7
BRCA1-225ENST00000586385 PNLIPRP2P54317 469 aa10.68□□□□□ -0.7
BRCA1-225ENST00000586385 NR1H2P55055 460 aa10.68□□□□□ -0.7
BRCA1-225ENST00000586385 CDH13P55290 713 aa10.68□□□□□ -0.7
BRCA1-225ENST00000586385 DSCR4P56555 118 aaPredicted RBP10.68□□□□□ -0.7
BRCA1-225ENST00000586385 PPP2R2BQ00005 443 aa10.68□□□□□ -0.7
BRCA1-225ENST00000586385 PSG6Q00889 435 aa10.68□□□□□ -0.7
BRCA1-225ENST00000586385 C2orf54Q08AI8 447 aa10.68□□□□□ -0.7
BRCA1-225ENST00000586385 TNK1Q13470 666 aa10.68□□□□□ -0.7
BRCA1-225ENST00000586385 EFR3AQ14156 821 aa10.68□□□□□ -0.7
BRCA1-225ENST00000586385 PON3Q15166 354 aa10.68□□□□□ -0.7
BRCA1-225ENST00000586385 C10orf62Q5T681 223 aaPredicted RBP10.68□□□□□ -0.7
BRCA1-225ENST00000586385 TTC19Q6DKK2 380 aaPredicted RBP10.68□□□□□ -0.7
BRCA1-225ENST00000586385 MILR1Q7Z6M3 343 aa10.68□□□□□ -0.7
BRCA1-225ENST00000586385 SPATA4Q8NEY3 305 aa10.68□□□□□ -0.7
BRCA1-225ENST00000586385 OR7G2Q8NG99 324 aa10.68□□□□□ -0.7
BRCA1-225ENST00000586385 OR4K17Q8NGC6 315 aa10.68□□□□□ -0.7
BRCA1-225ENST00000586385 ZNF483Q8TF39 744 aaPredicted RBP10.68□□□□□ -0.7
BRCA1-225ENST00000586385 SLC39A3Q9BRY0 314 aa10.68□□□□□ -0.7
BRCA1-225ENST00000586385 TMEM204Q9BSN7 226 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms