RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 CDSNQ15517 529 aa17.16■□□□□ 0.34
ATG4D-203ENST00000585752 PGS1Q32NB8 556 aa17.16■□□□□ 0.34
ATG4D-203ENST00000585752 SLC9B1Q4ZJI4 515 aa17.16■□□□□ 0.34
ATG4D-203ENST00000585752 OGFOD2Q6N063 350 aa17.16■□□□□ 0.34
ATG4D-203ENST00000585752 TMEM64Q6YI46 380 aa17.16■□□□□ 0.34
ATG4D-203ENST00000585752 LARP4Q71RC2 724 aaKnown RBP eCLIP17.16■□□□□ 0.34
ATG4D-203ENST00000585752 NATD1Q8N6N6 113 aa17.16■□□□□ 0.34
ATG4D-203ENST00000585752 C17orf47Q8NEP4 570 aa17.16■□□□□ 0.34
ATG4D-203ENST00000585752 LILRB4Q8NHJ6 448 aa17.16■□□□□ 0.34
ATG4D-203ENST00000585752 CEP70Q8NHQ1 597 aa17.16■□□□□ 0.34
ATG4D-203ENST00000585752 SECISBP2Q96T21 854 aaKnown RBP17.16■□□□□ 0.34
ATG4D-203ENST00000585752 ZBTB18Q99592 522 aa17.16■□□□□ 0.34
ATG4D-203ENST00000585752 SPOCK3Q9BQ16 436 aa17.16■□□□□ 0.34
ATG4D-203ENST00000585752 METTL7AQ9H8H3 244 aa17.16■□□□□ 0.34
ATG4D-203ENST00000585752 SH2D2AQ9NP31 389 aa17.16■□□□□ 0.34
ATG4D-203ENST00000585752 TNFRSF10DQ9UBN6 386 aa17.16■□□□□ 0.34
ATG4D-203ENST00000585752 ATP6V1HQ9UI12 483 aa17.16■□□□□ 0.34
ATG4D-203ENST00000585752 HRH3Q9Y5N1 445 aa17.16■□□□□ 0.34
ATG4D-203ENST00000585752 C15orf38-AP3S2A0A0A6YYH1 394 aa17.15■□□□□ 0.34
ATG4D-203ENST00000585752 ANKRD33BA6NCL7 494 aa17.15■□□□□ 0.34
ATG4D-203ENST00000585752 COQ9O75208 318 aa17.15■□□□□ 0.34
ATG4D-203ENST00000585752 GCKP35557 465 aa17.15■□□□□ 0.34
ATG4D-203ENST00000585752 KIR3DL1P43629 444 aa17.15■□□□□ 0.34
ATG4D-203ENST00000585752 ZFP36L2P47974 494 aaKnown RBP17.15■□□□□ 0.34
ATG4D-203ENST00000585752 CLDN8P56748 225 aa17.15■□□□□ 0.34
ATG4D-203ENST00000585752 DCAF7P61962 342 aa17.15■□□□□ 0.34
ATG4D-203ENST00000585752 MRPS35P82673 323 aaKnown RBP17.15■□□□□ 0.34
ATG4D-203ENST00000585752 PDE7AQ13946 482 aa17.15■□□□□ 0.34
ATG4D-203ENST00000585752 EXOSC7Q15024 291 aaKnown RBP17.15■□□□□ 0.34
ATG4D-203ENST00000585752 SF3B4Q15427 424 aaKnown RBP eCLIP17.15■□□□□ 0.341e-7■■■■□ 20.4
ATG4D-203ENST00000585752 CEBPEQ15744 281 aa17.15■□□□□ 0.34
ATG4D-203ENST00000585752 ZNF628Q5EBL2 1059 aa17.15■□□□□ 0.34
ATG4D-203ENST00000585752 EMC4Q5J8M3 183 aa17.15■□□□□ 0.34
ATG4D-203ENST00000585752 TMEM107Q6UX40 140 aa17.15■□□□□ 0.34
ATG4D-203ENST00000585752 SZRD1Q7Z422 152 aa17.15■□□□□ 0.34
ATG4D-203ENST00000585752 CCDC71Q8IV32 467 aaPredicted RBP17.15■□□□□ 0.34
ATG4D-203ENST00000585752 PRR22Q8IZ63 422 aa17.15■□□□□ 0.34
ATG4D-203ENST00000585752 MARVELD2Q8N4S9 558 aa17.15■□□□□ 0.34
ATG4D-203ENST00000585752 ZNF615Q8N8J6 731 aa17.15■□□□□ 0.34
ATG4D-203ENST00000585752 OR7A2PQ8NGA2 310 aa17.15■□□□□ 0.34
ATG4D-203ENST00000585752 OR52R1Q8NGF1 315 aa17.15■□□□□ 0.34
ATG4D-203ENST00000585752 SPPL2AQ8TCT8 520 aa17.15■□□□□ 0.34
ATG4D-203ENST00000585752 ACTRT2Q8TDY3 377 aa17.15■□□□□ 0.34
ATG4D-203ENST00000585752 ADIPOR1Q96A54 375 aa17.15■□□□□ 0.34
ATG4D-203ENST00000585752 CIDECQ96AQ7 238 aaPredicted RBP17.15■□□□□ 0.34
ATG4D-203ENST00000585752 HSPBAP1Q96EW2 488 aa17.15■□□□□ 0.34
ATG4D-203ENST00000585752 LCORQ96JN0 433 aaPredicted RBP17.15■□□□□ 0.34
ATG4D-203ENST00000585752 AMDHD1Q96NU7 426 aa17.15■□□□□ 0.34
ATG4D-203ENST00000585752 GLIPR2Q9H4G4 154 aa17.15■□□□□ 0.34
ATG4D-203ENST00000585752 ZNF703Q9H7S9 590 aaPredicted RBP17.15■□□□□ 0.34
ATG4D-203ENST00000585752 ACKR4Q9NPB9 350 aa17.15■□□□□ 0.34
ATG4D-203ENST00000585752 DDX18Q9NVP1 670 aaKnown RBP17.15■□□□□ 0.34
ATG4D-203ENST00000585752 TAS2R9Q9NYW1 312 aa17.15■□□□□ 0.34
ATG4D-203ENST00000585752 CNOT11Q9UKZ1 510 aaKnown RBP17.15■□□□□ 0.34
ATG4D-203ENST00000585752 EXO1Q9UQ84 846 aaKnown RBP17.15■□□□□ 0.34
ATG4D-203ENST00000585752 NOTCH2Q04721 2471 aa17.14■□□□□ 0.34
ATG4D-203ENST00000585752 PKDREJQ9NTG1 2253 aa17.14■□□□□ 0.33
ATG4D-203ENST00000585752 VIMP08670 466 aaKnown RBP17.14■□□□□ 0.33
ATG4D-203ENST00000585752 RFPL3SP0C7P2 107 aa17.14■□□□□ 0.33
ATG4D-203ENST00000585752 IDO1P14902 403 aa17.14■□□□□ 0.33
ATG4D-203ENST00000585752 GPX3P22352 226 aa17.14■□□□□ 0.33
ATG4D-203ENST00000585752 KRT20P35900 424 aa17.14■□□□□ 0.33
ATG4D-203ENST00000585752 TRPC1P48995 793 aa17.14■□□□□ 0.33
ATG4D-203ENST00000585752 AQP5P55064 265 aa17.14■□□□□ 0.33
ATG4D-203ENST00000585752 PLCXD2Q0VAA5 305 aa17.14■□□□□ 0.33
ATG4D-203ENST00000585752 NNATQ16517 81 aa17.14■□□□□ 0.33
ATG4D-203ENST00000585752 LSM12Q3MHD2 195 aaKnown RBP17.14■□□□□ 0.33
ATG4D-203ENST00000585752 TRMT12Q53H54 448 aaKnown RBP17.14■□□□□ 0.33
ATG4D-203ENST00000585752 C1orf185Q5T7R7 199 aa17.14■□□□□ 0.33
ATG4D-203ENST00000585752 KRTCAP2Q8N6L1 136 aa17.14■□□□□ 0.33
ATG4D-203ENST00000585752 ZNF441Q8N8Z8 693 aa17.14■□□□□ 0.33
ATG4D-203ENST00000585752 NEIL3Q8TAT5 605 aa17.14■□□□□ 0.33
ATG4D-203ENST00000585752 RILPQ96NA2 401 aa17.14■□□□□ 0.33
ATG4D-203ENST00000585752 TTYH2Q9BSA4 534 aa17.14■□□□□ 0.33
ATG4D-203ENST00000585752 ACSS1Q9NUB1 689 aaPredicted RBP17.14■□□□□ 0.33
ATG4D-203ENST00000585752 CREBBPQ92793 2442 aa17.13■□□□□ 0.33
ATG4D-203ENST00000585752 A0A1W2PRB8 838 aa17.13■□□□□ 0.33
ATG4D-203ENST00000585752 NKX2-6A6NCS4 301 aa17.13■□□□□ 0.33
ATG4D-203ENST00000585752 UBDO15205 165 aa17.13■□□□□ 0.33
ATG4D-203ENST00000585752 CFLARO15519 480 aa17.13■□□□□ 0.33
ATG4D-203ENST00000585752 TROVE2P10155 538 aaKnown RBP eCLIP17.13■□□□□ 0.33
ATG4D-203ENST00000585752 NAGAP17050 411 aa17.13■□□□□ 0.33
ATG4D-203ENST00000585752 ABCD3P28288 659 aa17.13■□□□□ 0.33
ATG4D-203ENST00000585752 MC3RP41968 323 aa17.13■□□□□ 0.33
ATG4D-203ENST00000585752 NME5P56597 212 aa17.13■□□□□ 0.33
ATG4D-203ENST00000585752 STX1BP61266 288 aa17.13■□□□□ 0.33
ATG4D-203ENST00000585752 ZNF155Q12901 538 aaPredicted RBP17.13■□□□□ 0.33
ATG4D-203ENST00000585752 DPY19L1Q2PZI1 675 aa17.13■□□□□ 0.33
ATG4D-203ENST00000585752 ZNF385BQ569K4 471 aa17.13■□□□□ 0.33
ATG4D-203ENST00000585752 EPGNQ6UW88 154 aa17.13■□□□□ 0.33
ATG4D-203ENST00000585752 ZNF551Q7Z340 670 aaPredicted RBP17.13■□□□□ 0.33
ATG4D-203ENST00000585752 NUP54Q7Z3B4 507 aa17.13■□□□□ 0.33
ATG4D-203ENST00000585752 RPRMLQ8N4K4 120 aa17.13■□□□□ 0.33
ATG4D-203ENST00000585752 VPS37AQ8NEZ2 397 aa17.13■□□□□ 0.33
ATG4D-203ENST00000585752 OR1J4Q8NGS1 313 aa17.13■□□□□ 0.33
ATG4D-203ENST00000585752 CTHRC1Q96CG8 243 aa17.13■□□□□ 0.33
ATG4D-203ENST00000585752 DTNBP1Q96EV8 351 aa17.13■□□□□ 0.33
ATG4D-203ENST00000585752 LRRC46Q96FV0 321 aa17.13■□□□□ 0.33
ATG4D-203ENST00000585752 MAELQ96JY0 434 aaKnown RBP17.13■□□□□ 0.33
ATG4D-203ENST00000585752 DUSP26Q9BV47 211 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms