RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 IL1RL2Q9HB29 575 aa13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 B3GNT3Q9Y2A9 372 aa13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 KLF13Q9Y2Y9 288 aaPredicted RBP13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 ZZEF1O43149 2961 aa13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 CACNA1BQ00975 2339 aa13.45□□□□□ -0.26
SCAMP4-209ENST00000585335 ZFHX4Q86UP3 3567 aa13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 DSPP15924 2871 aaKnown RBP13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 OR6C70A6NIJ9 312 aa13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 K7EM74 188 aa13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 FBP2O00757 339 aa13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 P04436 131 aa13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 PTPN6P29350 595 aa13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 LCN1P31025 176 aa13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 MAP3K8P41279 467 aa13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 CRATP43155 626 aa13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 PNLIPRP2P54317 469 aa13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 RPS26P62854 115 aaKnown RBP13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 HPCAP84074 193 aa13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 KLRB1Q12918 225 aa13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 FADDQ13158 208 aa13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 ZNF169Q14929 603 aaPredicted RBP13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 GTDC1Q4AE62 458 aa13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 ZNF468Q5VIY5 522 aaPredicted RBP13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 FAM91A1Q658Y4 838 aa13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 TNFAIP8L2Q6P589 184 aaPredicted RBP13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 RETREG3Q86VR2 466 aa13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 BCORP1Q8N888 145 aa13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 OR52N2Q8NGI0 321 aa13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 OR5M3Q8NGP4 307 aa13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 PNPT1Q8TCS8 783 aaKnown RBP13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 PIK3R3Q92569 461 aa13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 DIO2Q92813 273 aa13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 PNPLA2Q96AD5 504 aa13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 ROPN1LQ96C74 230 aa13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 RCN3Q96D15 328 aa13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 OTUB1Q96FW1 271 aaPredicted RBP13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 SLC35A4Q96G79 324 aa13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 AURKBQ96GD4 344 aaPredicted RBP13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 SECISBP2Q96T21 854 aaKnown RBP13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 CGREF1Q99674 301 aa13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 EFCAB1Q9HAE3 211 aa13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 SLC6A13Q9NSD5 602 aa13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 CNIH4Q9P003 139 aa13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 PCDHGB6Q9Y5F9 930 aa13.44□□□□□ -0.26
SCAMP4-209ENST00000585335 MGAQ8IWI9 3026 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 GXYLT2A0PJZ3 443 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 IL33O95760 270 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 SP1P08047 785 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 CD1EP15812 388 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 RFX3P48380 749 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 MAN2A2P49641 1150 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 CLK3P49761 638 aaKnown RBP13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 MNAT1P51948 309 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 FBXW4P57775 412 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 DSTNP60981 165 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 ART3Q13508 389 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 GNA13Q14344 377 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 ZNF766Q5HY98 468 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 TBCELQ5QJ74 424 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 EXOSC6Q5RKV6 272 aaKnown RBP13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 DCST2Q5T1A1 773 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 SLC22A10Q63ZE4 541 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 SPINK14Q6IE38 97 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 SLC25A25Q6KCM7 469 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 LYPD8Q6UX82 237 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 DLEU7Q6UYE1 221 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 Q6ZS92 163 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 TREML1Q86YW5 311 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 RBMXL3Q8N7X1 1067 aaKnown RBP13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 PSD4Q8NDX1 1056 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 MDS2Q8NDY4 140 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 OR10G3Q8NGC4 313 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 OR4N2Q8NGD1 307 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 OR5D16Q8NGK9 328 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 XAGE5Q8WWM1 108 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 EFHD2Q96C19 240 aaPredicted RBP13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 SIGLEC12Q96PQ1 595 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 ADOQ96SZ5 270 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 MFRPQ9BY79 579 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 SACM1LQ9NTJ5 587 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 SLC25A37Q9NYZ2 338 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 VAPAQ9P0L0 249 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 TAGLN3Q9UI15 199 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 LIPT1Q9Y234 373 aa13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 NUP214P35658 2090 aaPredicted RBP13.43□□□□□ -0.26
SCAMP4-209ENST00000585335 LOC400499M0QZD8 3231 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 TRBV5-3A0A0A0MS03 114 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 C15orf38-AP3S2A0A0A6YYH1 394 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 KLRC4-KLRK1H3BQV0 150 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 AIM2O14862 343 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 NME2P1O60361 137 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 TSPAN2O60636 221 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 ZNF354AO60765 605 aaPredicted RBP13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 NEURL1O76050 574 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 KCNK2O95069 426 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 OR12D1P0DN82 309 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 HOXB9P17482 250 aaPredicted RBP13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 NME2P22392 152 aa13.42□□□□□ -0.26
SCAMP4-209ENST00000585335 CD97P48960 835 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms