RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 ESRRBO95718 433 aa13.6□□□□□ -0.23
VAPA-209ENST00000585042 SNRPAP09012 282 aaKnown RBP13.6□□□□□ -0.23
VAPA-209ENST00000585042 SBK3P0C264 359 aa13.6□□□□□ -0.23
VAPA-209ENST00000585042 PEPDP12955 493 aa13.6□□□□□ -0.23
VAPA-209ENST00000585042 IL12BP29460 328 aa13.6□□□□□ -0.23
VAPA-209ENST00000585042 DSCR4P56555 118 aaPredicted RBP13.6□□□□□ -0.23
VAPA-209ENST00000585042 CLDN18P56856 261 aa13.6□□□□□ -0.23
VAPA-209ENST00000585042 EEFSECP57772 596 aaKnown RBP13.6□□□□□ -0.23
VAPA-209ENST00000585042 MRPS35P82673 323 aaKnown RBP13.6□□□□□ -0.23
VAPA-209ENST00000585042 LTB4RQ15722 352 aa13.6□□□□□ -0.23
VAPA-209ENST00000585042 GALNT18Q6P9A2 607 aa13.6□□□□□ -0.23
VAPA-209ENST00000585042 TIFABQ6ZNK6 161 aa13.6□□□□□ -0.23
VAPA-209ENST00000585042 TRMT10CQ7L0Y3 403 aaKnown RBP13.6□□□□□ -0.23
VAPA-209ENST00000585042 CHMP1BQ7LBR1 199 aa13.6□□□□□ -0.23
VAPA-209ENST00000585042 LUZP2Q86TE4 346 aa13.6□□□□□ -0.23
VAPA-209ENST00000585042 GRAMD2AQ8IUY3 354 aa13.6□□□□□ -0.23
VAPA-209ENST00000585042 EIF1ADQ8N9N8 165 aaKnown RBP13.6□□□□□ -0.23
VAPA-209ENST00000585042 RDH11Q8TC12 318 aa13.6□□□□□ -0.23
VAPA-209ENST00000585042 DCAKDQ8WVC6 231 aa13.6□□□□□ -0.23
VAPA-209ENST00000585042 C18orf12Q96KH6 178 aa13.6□□□□□ -0.23
VAPA-209ENST00000585042 SFXN2Q96NB2 322 aa13.6□□□□□ -0.23
VAPA-209ENST00000585042 ZNF382Q96SR6 550 aa13.6□□□□□ -0.23
VAPA-209ENST00000585042 PIP5K1AQ99755 562 aa13.6□□□□□ -0.23
VAPA-209ENST00000585042 GSX1Q9H4S2 264 aaPredicted RBP13.6□□□□□ -0.23
VAPA-209ENST00000585042 SLC35C2Q9NQQ7 365 aa13.6□□□□□ -0.23
VAPA-209ENST00000585042 SDHAF3Q9NRP4 125 aa13.6□□□□□ -0.23
VAPA-209ENST00000585042 GIMAP4Q9NUV9 329 aa13.6□□□□□ -0.23
VAPA-209ENST00000585042 HEY2Q9UBP5 337 aa13.6□□□□□ -0.23
VAPA-209ENST00000585042 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.59□□□□□ -0.23
VAPA-209ENST00000585042 FAM171A2A8MVW0 826 aa13.59□□□□□ -0.23
VAPA-209ENST00000585042 TRIM49D1C9J1S8 452 aa13.59□□□□□ -0.23
VAPA-209ENST00000585042 ARHGEF9O43307 516 aa13.59□□□□□ -0.23
VAPA-209ENST00000585042 TNFSF13O75888 250 aa13.59□□□□□ -0.23
VAPA-209ENST00000585042 SUPT7LO94864 414 aa13.59□□□□□ -0.23
VAPA-209ENST00000585042 IMPDH1P20839 514 aa13.59□□□□□ -0.23
VAPA-209ENST00000585042 GRK2P25098 689 aa13.59□□□□□ -0.23
VAPA-209ENST00000585042 DPP4P27487 766 aa13.59□□□□□ -0.23
VAPA-209ENST00000585042 ECHS1P30084 290 aa13.59□□□□□ -0.23
VAPA-209ENST00000585042 STARP49675 285 aa13.59□□□□□ -0.23
VAPA-209ENST00000585042 GAS1P54826 345 aa13.59□□□□□ -0.23
VAPA-209ENST00000585042 OCRLQ01968 901 aa13.59□□□□□ -0.23
VAPA-209ENST00000585042 ACSM2AQ08AH3 577 aa13.59□□□□□ -0.23
VAPA-209ENST00000585042 CYP27C1Q4G0S4 372 aa13.59□□□□□ -0.23
VAPA-209ENST00000585042 ZNF678Q5SXM1 525 aa13.59□□□□□ -0.23
VAPA-209ENST00000585042 TEX35Q5T0J7 233 aa13.59□□□□□ -0.23
VAPA-209ENST00000585042 ACSM2BQ68CK6 577 aa13.59□□□□□ -0.23
VAPA-209ENST00000585042 LARP4Q71RC2 724 aaKnown RBP eCLIP13.59□□□□□ -0.23
VAPA-209ENST00000585042 RPS27LQ71UM5 84 aaKnown RBP13.59□□□□□ -0.23
VAPA-209ENST00000585042 MED12LQ86YW9 2145 aa13.59□□□□□ -0.23
VAPA-209ENST00000585042 LRRC75A-AS1Q8N1F1 130 aa13.59□□□□□ -0.23
VAPA-209ENST00000585042 CDYL2Q8N8U2 506 aa13.59□□□□□ -0.23
VAPA-209ENST00000585042 METTL6Q8TCB7 284 aa13.59□□□□□ -0.23
VAPA-209ENST00000585042 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.59□□□□□ -0.23
VAPA-209ENST00000585042 MTBPQ96DY7 904 aa13.59□□□□□ -0.23
VAPA-209ENST00000585042 C11orf24Q96F05 449 aaPredicted RBP13.59□□□□□ -0.23
VAPA-209ENST00000585042 PFDN4Q9NQP4 134 aa13.59□□□□□ -0.23
VAPA-209ENST00000585042 ELOVL5Q9NYP7 299 aa13.59□□□□□ -0.23
VAPA-209ENST00000585042 FBXL2Q9UKC9 423 aa13.59□□□□□ -0.23
VAPA-209ENST00000585042 WBP11Q9Y2W2 641 aaKnown RBP13.59□□□□□ -0.23
VAPA-209ENST00000585042 MED12Q93074 2177 aa13.59□□□□□ -0.23
VAPA-209ENST00000585042 ABCA2Q9BZC7 2435 aa13.59□□□□□ -0.23
VAPA-209ENST00000585042 A0A087WV62 115 aa13.58□□□□□ -0.24
VAPA-209ENST00000585042 A0A1W2PNV4 684 aa13.58□□□□□ -0.24
VAPA-209ENST00000585042 GNG14A0A1W2PPG7 69 aa13.58□□□□□ -0.24
VAPA-209ENST00000585042 ESPNB1AK53 854 aa13.58□□□□□ -0.24
VAPA-209ENST00000585042 POC1B-GALNT4F8VUJ3 575 aa13.58□□□□□ -0.24
VAPA-209ENST00000585042 PCDH7O60245 1069 aa13.58□□□□□ -0.24
VAPA-209ENST00000585042 TNFRSF21O75509 655 aa13.58□□□□□ -0.24
VAPA-209ENST00000585042 IL3P08700 152 aa13.58□□□□□ -0.24
VAPA-209ENST00000585042 TSPAN8P19075 237 aa13.58□□□□□ -0.24
VAPA-209ENST00000585042 MC3RP41968 323 aa13.58□□□□□ -0.24
VAPA-209ENST00000585042 PKNOX1P55347 436 aa13.58□□□□□ -0.24
VAPA-209ENST00000585042 B3GALT5-AS1P59052 145 aa13.58□□□□□ -0.24
VAPA-209ENST00000585042 RAE1P78406 368 aaKnown RBP13.58□□□□□ -0.24
VAPA-209ENST00000585042 NKX6-1P78426 367 aaPredicted RBP13.58□□□□□ -0.24
VAPA-209ENST00000585042 FGFBP1Q14512 234 aa13.58□□□□□ -0.24
VAPA-209ENST00000585042 GANABQ14697 944 aaKnown RBP13.58□□□□□ -0.24
VAPA-209ENST00000585042 GLYR1Q49A26 553 aaPredicted RBP13.58□□□□□ -0.24
VAPA-209ENST00000585042 UNC50Q53HI1 259 aa13.58□□□□□ -0.24
VAPA-209ENST00000585042 UBAP2Q5T6F2 1119 aaKnown RBP13.58□□□□□ -0.24
VAPA-209ENST00000585042 FAM180BQ6P0A1 224 aa13.58□□□□□ -0.24
VAPA-209ENST00000585042 GPRIN3Q6ZVF9 776 aa13.58□□□□□ -0.24
VAPA-209ENST00000585042 SLC22A9Q8IVM8 553 aa13.58□□□□□ -0.24
VAPA-209ENST00000585042 FAM9CQ8IZT9 166 aa13.58□□□□□ -0.24
VAPA-209ENST00000585042 WFDC11Q8NEX6 87 aa13.58□□□□□ -0.24
VAPA-209ENST00000585042 C16orf78Q8WTQ4 265 aa13.58□□□□□ -0.24
VAPA-209ENST00000585042 PIGTQ969N2 578 aa13.58□□□□□ -0.24
VAPA-209ENST00000585042 STARD4Q96DR4 205 aa13.58□□□□□ -0.24
VAPA-209ENST00000585042 FOLH1BQ9HBA9 442 aa13.58□□□□□ -0.24
VAPA-209ENST00000585042 ZNF226Q9NYT6 803 aa13.58□□□□□ -0.24
VAPA-209ENST00000585042 TAS2R7Q9NYW3 318 aa13.58□□□□□ -0.24
VAPA-209ENST00000585042 DKKL1Q9UK85 242 aa13.58□□□□□ -0.24
VAPA-209ENST00000585042 TESMINQ9Y4I5 508 aa13.58□□□□□ -0.24
VAPA-209ENST00000585042 CTIFO43310 598 aaKnown RBP13.57□□□□□ -0.24
VAPA-209ENST00000585042 COQ9O75208 318 aa13.57□□□□□ -0.24
VAPA-209ENST00000585042 TGM6O95932 706 aa13.57□□□□□ -0.24
VAPA-209ENST00000585042 ENO1P06733 434 aaKnown RBP13.57□□□□□ -0.24
VAPA-209ENST00000585042 ABHD2P08910 425 aa13.57□□□□□ -0.24
VAPA-209ENST00000585042 INHBBP09529 407 aa13.57□□□□□ -0.24
VAPA-209ENST00000585042 ATP5F1P24539 256 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms