RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 ZNF551Q7Z340 670 aaPredicted RBP12.16□□□□□ -0.46
SREBF1-223ENST00000584760 PACS2Q86VP3 889 aa12.16□□□□□ -0.46
SREBF1-223ENST00000584760 OR4N2Q8NGD1 307 aa12.16□□□□□ -0.46
SREBF1-223ENST00000584760 NEIL3Q8TAT5 605 aa12.16□□□□□ -0.46
SREBF1-223ENST00000584760 SARAFQ96BY9 339 aa12.16□□□□□ -0.46
SREBF1-223ENST00000584760 PPCDCQ96CD2 204 aa12.16□□□□□ -0.46
SREBF1-223ENST00000584760 COL21A1Q96P44 957 aa12.16□□□□□ -0.46
SREBF1-223ENST00000584760 GNRHR2Q96P88 292 aa12.16□□□□□ -0.46
SREBF1-223ENST00000584760 SPOCK3Q9BQ16 436 aa12.16□□□□□ -0.46
SREBF1-223ENST00000584760 C20orf27Q9GZN8 174 aa12.16□□□□□ -0.46
SREBF1-223ENST00000584760 LDAHQ9H6V9 325 aa12.16□□□□□ -0.46
SREBF1-223ENST00000584760 ZNF395Q9H8N7 513 aaPredicted RBP12.16□□□□□ -0.46
SREBF1-223ENST00000584760 GALNT9Q9HCQ5 603 aa12.16□□□□□ -0.46
SREBF1-223ENST00000584760 MED12Q93074 2177 aa12.16□□□□□ -0.46
SREBF1-223ENST00000584760 MED13LQ71F56 2210 aa12.15□□□□□ -0.46
SREBF1-223ENST00000584760 FIGNL2A6NMB9 653 aa12.15□□□□□ -0.46
SREBF1-223ENST00000584760 TMEM114B3SHH9 223 aa12.15□□□□□ -0.46
SREBF1-223ENST00000584760 SCAMP2O15127 329 aaKnown RBP12.15□□□□□ -0.46
SREBF1-223ENST00000584760 ICOSLGO75144 302 aa12.15□□□□□ -0.46
SREBF1-223ENST00000584760 PEX11AO75192 247 aa12.15□□□□□ -0.46
SREBF1-223ENST00000584760 HSPA4LO95757 839 aa12.15□□□□□ -0.46
SREBF1-223ENST00000584760 HPNP05981 417 aa12.15□□□□□ -0.46
SREBF1-223ENST00000584760 ACVR2AP27037 513 aa12.15□□□□□ -0.46
SREBF1-223ENST00000584760 MAPK1P28482 360 aa12.15□□□□□ -0.46
SREBF1-223ENST00000584760 PTPN6P29350 595 aa12.15□□□□□ -0.46
SREBF1-223ENST00000584760 CDK9P50750 372 aaKnown RBP12.15□□□□□ -0.46
SREBF1-223ENST00000584760 ABCE1P61221 599 aaKnown RBP12.15□□□□□ -0.46
SREBF1-223ENST00000584760 PTGR1Q14914 329 aa12.15□□□□□ -0.46
SREBF1-223ENST00000584760 GXYLT1Q4G148 440 aa12.15□□□□□ -0.46
SREBF1-223ENST00000584760 ATP6AP1LQ52LC2 224 aa12.15□□□□□ -0.46
SREBF1-223ENST00000584760 C6orf136Q5SQH8 315 aa12.15□□□□□ -0.46
SREBF1-223ENST00000584760 BEND6Q5SZJ8 279 aaPredicted RBP12.15□□□□□ -0.46
SREBF1-223ENST00000584760 SLC30A6Q6NXT4 461 aa12.15□□□□□ -0.46
SREBF1-223ENST00000584760 ANGPTL8Q6UXH0 198 aa12.15□□□□□ -0.46
SREBF1-223ENST00000584760 MEX3BQ6ZN04 569 aaKnown RBP12.15□□□□□ -0.46
SREBF1-223ENST00000584760 SLC44A2Q8IWA5 706 aaPredicted RBP12.15□□□□□ -0.46
SREBF1-223ENST00000584760 LIX1Q8N485 282 aa12.15□□□□□ -0.46
SREBF1-223ENST00000584760 ZNF781Q8N8C0 355 aa12.15□□□□□ -0.46
SREBF1-223ENST00000584760 OR5M9Q8NGP3 310 aa12.15□□□□□ -0.46
SREBF1-223ENST00000584760 PPP1R14CQ8TAE6 165 aa12.15□□□□□ -0.46
SREBF1-223ENST00000584760 HOXB13Q92826 284 aaPredicted RBP12.15□□□□□ -0.46
SREBF1-223ENST00000584760 MTERF3Q96E29 417 aa12.15□□□□□ -0.46
SREBF1-223ENST00000584760 ZBED6CLQ96FA7 236 aaPredicted RBP12.15□□□□□ -0.46
SREBF1-223ENST00000584760 ADOQ96SZ5 270 aa12.15□□□□□ -0.46
SREBF1-223ENST00000584760 SORT1Q99523 831 aa12.15□□□□□ -0.46
SREBF1-223ENST00000584760 LMF2Q9BU23 707 aaKnown RBP12.15□□□□□ -0.46
SREBF1-223ENST00000584760 EXO5Q9H790 373 aa12.15□□□□□ -0.46
SREBF1-223ENST00000584760 ACSS1Q9NUB1 689 aaPredicted RBP12.15□□□□□ -0.46
SREBF1-223ENST00000584760 KLRF1Q9NZS2 232 aa12.15□□□□□ -0.46
SREBF1-223ENST00000584760 FAM215AQ9Y5M1 114 aa12.15□□□□□ -0.46
SREBF1-223ENST00000584760 KIAA1549Q9HCM3 1950 aa12.15□□□□□ -0.46
SREBF1-223ENST00000584760 NUP214P35658 2090 aaPredicted RBP12.15□□□□□ -0.46
SREBF1-223ENST00000584760 MTORP42345 2549 aa12.14□□□□□ -0.47
SREBF1-223ENST00000584760 GNB5O14775 395 aa12.14□□□□□ -0.47
SREBF1-223ENST00000584760 WDR1O75083 606 aa12.14□□□□□ -0.47
SREBF1-223ENST00000584760 REM1O75628 298 aa12.14□□□□□ -0.47
SREBF1-223ENST00000584760 MYZAPP0CAP1 466 aa12.14□□□□□ -0.47
SREBF1-223ENST00000584760 IL12BP29460 328 aa12.14□□□□□ -0.47
SREBF1-223ENST00000584760 HPCAL1P37235 193 aa12.14□□□□□ -0.47
SREBF1-223ENST00000584760 TRPC1P48995 793 aa12.14□□□□□ -0.47
SREBF1-223ENST00000584760 PNLIPRP2P54317 469 aa12.14□□□□□ -0.47
SREBF1-223ENST00000584760 CRYZQ08257 329 aaKnown RBP12.14□□□□□ -0.47
SREBF1-223ENST00000584760 EFR3AQ14156 821 aa12.14□□□□□ -0.47
SREBF1-223ENST00000584760 WLSQ5T9L3 541 aa12.14□□□□□ -0.47
SREBF1-223ENST00000584760 RTL6Q6ICC9 239 aa12.14□□□□□ -0.47
SREBF1-223ENST00000584760 ZNF585AQ6P3V2 769 aa12.14□□□□□ -0.47
SREBF1-223ENST00000584760 LARP4Q71RC2 724 aaKnown RBP eCLIP12.14□□□□□ -0.47
SREBF1-223ENST00000584760 WDR53Q7Z5U6 358 aaPredicted RBP12.14□□□□□ -0.47
SREBF1-223ENST00000584760 WDSUB1Q8N9V3 476 aa12.14□□□□□ -0.47
SREBF1-223ENST00000584760 OR1J4Q8NGS1 313 aa12.14□□□□□ -0.47
SREBF1-223ENST00000584760 ZFP28Q8NHY6 868 aa12.14□□□□□ -0.47
SREBF1-223ENST00000584760 EFHD2Q96C19 240 aaPredicted RBP12.14□□□□□ -0.47
SREBF1-223ENST00000584760 SDCCAG3Q96C92 435 aa12.14□□□□□ -0.47
SREBF1-223ENST00000584760 TMCO6Q96DC7 493 aa12.14□□□□□ -0.47
SREBF1-223ENST00000584760 C1orf50Q9BV19 199 aa12.14□□□□□ -0.47
SREBF1-223ENST00000584760 SH3BP4Q9P0V3 963 aa12.14□□□□□ -0.47
SREBF1-223ENST00000584760 NTMQ9P121 344 aa12.14□□□□□ -0.47
SREBF1-223ENST00000584760 ATP6V1HQ9UI12 483 aa12.14□□□□□ -0.47
SREBF1-223ENST00000584760 HAO1Q9UJM8 370 aa12.14□□□□□ -0.47
SREBF1-223ENST00000584760 RAP2CQ9Y3L5 183 aa12.14□□□□□ -0.47
SREBF1-223ENST00000584760 OR10H1Q9Y4A9 318 aa12.14□□□□□ -0.47
SREBF1-223ENST00000584760 PCDHGB3Q9Y5G1 929 aa12.14□□□□□ -0.47
SREBF1-223ENST00000584760 WIF1Q9Y5W5 379 aa12.14□□□□□ -0.47
SREBF1-223ENST00000584760 PCNX3Q9H6A9 2034 aa12.14□□□□□ -0.47
SREBF1-223ENST00000584760 ZFHX3Q15911 3703 aa12.14□□□□□ -0.47
SREBF1-223ENST00000584760 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.13□□□□□ -0.47
SREBF1-223ENST00000584760 C2orf72A6NCS6 295 aa12.13□□□□□ -0.47
SREBF1-223ENST00000584760 B4DXG7 233 aa12.13□□□□□ -0.47
SREBF1-223ENST00000584760 ERLIN1O75477 346 aa12.13□□□□□ -0.47
SREBF1-223ENST00000584760 TRAPPC6AO75865 159 aa12.13□□□□□ -0.47
SREBF1-223ENST00000584760 SNUPNO95149 360 aaKnown RBP12.13□□□□□ -0.47
SREBF1-223ENST00000584760 CYP4B1P13584 511 aa12.13□□□□□ -0.47
SREBF1-223ENST00000584760 CD1EP15812 388 aa12.13□□□□□ -0.47
SREBF1-223ENST00000584760 BGNP21810 368 aa12.13□□□□□ -0.47
SREBF1-223ENST00000584760 GRK2P25098 689 aa12.13□□□□□ -0.47
SREBF1-223ENST00000584760 GPC1P35052 558 aa12.13□□□□□ -0.47
SREBF1-223ENST00000584760 KRT20P35900 424 aa12.13□□□□□ -0.47
SREBF1-223ENST00000584760 MAP3K8P41279 467 aa12.13□□□□□ -0.47
SREBF1-223ENST00000584760 SLC1A6P48664 564 aa12.13□□□□□ -0.47
SREBF1-223ENST00000584760 GAS1P54826 345 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms