RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 USP9XQ93008 2570 aaPredicted RBP24.85■■□□□ 1.57
SMARCD2-210ENST00000584400 EMC8O43402 210 aa24.85■■□□□ 1.57
SMARCD2-210ENST00000584400 KCNH1O95259 989 aa24.85■■□□□ 1.57
SMARCD2-210ENST00000584400 HPNP05981 417 aa24.85■■□□□ 1.57
SMARCD2-210ENST00000584400 G6PDP11413 515 aa24.85■■□□□ 1.57
SMARCD2-210ENST00000584400 PRKAG1P54619 331 aa24.85■■□□□ 1.57
SMARCD2-210ENST00000584400 CLDN8P56748 225 aa24.85■■□□□ 1.57
SMARCD2-210ENST00000584400 C21orf58P58505 322 aa24.85■■□□□ 1.57
SMARCD2-210ENST00000584400 TOMM20Q15388 145 aa24.85■■□□□ 1.57
SMARCD2-210ENST00000584400 ZCCHC12Q6PEW1 402 aa24.85■■□□□ 1.57
SMARCD2-210ENST00000584400 GOLGA6L1Q8N7Z2 621 aa24.85■■□□□ 1.57
SMARCD2-210ENST00000584400 NUP43Q8NFH3 380 aa24.85■■□□□ 1.57
SMARCD2-210ENST00000584400 OR7A2PQ8NGA2 310 aa24.85■■□□□ 1.57
SMARCD2-210ENST00000584400 NEIL3Q8TAT5 605 aa24.85■■□□□ 1.57
SMARCD2-210ENST00000584400 NTNG2Q96CW9 530 aa24.85■■□□□ 1.57
SMARCD2-210ENST00000584400 COQ8BQ96D53 544 aa24.85■■□□□ 1.57
SMARCD2-210ENST00000584400 NUF2Q9BZD4 464 aa24.85■■□□□ 1.57
SMARCD2-210ENST00000584400 BHLHE41Q9C0J9 482 aaPredicted RBP24.85■■□□□ 1.57
SMARCD2-210ENST00000584400 MANSC1Q9H8J5 431 aa24.85■■□□□ 1.57
SMARCD2-210ENST00000584400 COQ3Q9NZJ6 369 aa24.85■■□□□ 1.57
SMARCD2-210ENST00000584400 PCDHGB3Q9Y5G1 929 aa24.85■■□□□ 1.57
SMARCD2-210ENST00000584400 DOPEY2Q9Y3R5 2298 aa24.85■■□□□ 1.57
SMARCD2-210ENST00000584400 SLCO1B7G3V0H7 640 aa24.84■■□□□ 1.57
SMARCD2-210ENST00000584400 GNB5O14775 395 aa24.84■■□□□ 1.57
SMARCD2-210ENST00000584400 SNPHO15079 494 aa24.84■■□□□ 1.57
SMARCD2-210ENST00000584400 GCKP35557 465 aa24.84■■□□□ 1.57
SMARCD2-210ENST00000584400 CDK9P50750 372 aaKnown RBP24.84■■□□□ 1.57
SMARCD2-210ENST00000584400 GAB1Q13480 694 aa24.84■■□□□ 1.57
SMARCD2-210ENST00000584400 FNDC7Q5VTL7 733 aa24.84■■□□□ 1.57
SMARCD2-210ENST00000584400 DESI1Q6ICB0 168 aa24.84■■□□□ 1.57
SMARCD2-210ENST00000584400 C3P1Q6ZMU1 363 aa24.84■■□□□ 1.57
SMARCD2-210ENST00000584400 OR4N2Q8NGD1 307 aa24.84■■□□□ 1.57
SMARCD2-210ENST00000584400 OR5P2Q8WZ92 322 aa24.84■■□□□ 1.57
SMARCD2-210ENST00000584400 EFHD2Q96C19 240 aaPredicted RBP24.84■■□□□ 1.57
SMARCD2-210ENST00000584400 DMRTA2Q96SC8 542 aa24.84■■□□□ 1.57
SMARCD2-210ENST00000584400 UBQLN3Q9H347 655 aa24.84■■□□□ 1.57
SMARCD2-210ENST00000584400 EQTNQ9NQ60 294 aa24.84■■□□□ 1.57
SMARCD2-210ENST00000584400 KLF2Q9Y5W3 355 aaPredicted RBP24.84■■□□□ 1.57
SMARCD2-210ENST00000584400 WDR1O75083 606 aa24.83■■□□□ 1.57
SMARCD2-210ENST00000584400 CBR3O75828 277 aa24.83■■□□□ 1.57
SMARCD2-210ENST00000584400 HOXD4P09016 255 aaPredicted RBP24.83■■□□□ 1.57
SMARCD2-210ENST00000584400 LAMP1P11279 417 aa24.83■■□□□ 1.57
SMARCD2-210ENST00000584400 LBPP18428 481 aa24.83■■□□□ 1.57
SMARCD2-210ENST00000584400 GABRA3P34903 492 aa24.83■■□□□ 1.57
SMARCD2-210ENST00000584400 PRIM2P49643 509 aa24.83■■□□□ 1.57
SMARCD2-210ENST00000584400 CLK3P49761 638 aaKnown RBP24.83■■□□□ 1.57
SMARCD2-210ENST00000584400 ADORA2A-AS1P86434 159 aa24.83■■□□□ 1.57
SMARCD2-210ENST00000584400 HDXQ7Z353 690 aa24.83■■□□□ 1.57
SMARCD2-210ENST00000584400 RIMKLAQ8IXN7 391 aa24.83■■□□□ 1.57
SMARCD2-210ENST00000584400 MEAF6Q9HAF1 191 aa24.83■■□□□ 1.57
SMARCD2-210ENST00000584400 GALNT9Q9HCQ5 603 aa24.83■■□□□ 1.57
SMARCD2-210ENST00000584400 NEUROD4Q9HD90 331 aa24.83■■□□□ 1.57
SMARCD2-210ENST00000584400 SDHAF3Q9NRP4 125 aa24.83■■□□□ 1.57
SMARCD2-210ENST00000584400 PNPOQ9NVS9 261 aa24.83■■□□□ 1.57
SMARCD2-210ENST00000584400 FLNBO75369 2602 aaKnown RBP24.83■■□□□ 1.57
SMARCD2-210ENST00000584400 TRPC5OSA6NMA1 111 aa24.82■■□□□ 1.56
SMARCD2-210ENST00000584400 ADAM10O14672 748 aa24.82■■□□□ 1.56
SMARCD2-210ENST00000584400 SNNO75324 88 aaPredicted RBP24.82■■□□□ 1.56
SMARCD2-210ENST00000584400 GABRA1P14867 456 aa24.82■■□□□ 1.56
SMARCD2-210ENST00000584400 PTPN6P29350 595 aa24.82■■□□□ 1.56
SMARCD2-210ENST00000584400 PTGDSP41222 190 aa24.82■■□□□ 1.56
SMARCD2-210ENST00000584400 ZNF585AQ6P3V2 769 aa24.82■■□□□ 1.56
SMARCD2-210ENST00000584400 ACAD11Q709F0 780 aa24.82■■□□□ 1.56
SMARCD2-210ENST00000584400 CAMKMTQ7Z624 323 aa24.82■■□□□ 1.56
SMARCD2-210ENST00000584400 KRTCAP2Q8N6L1 136 aa24.82■■□□□ 1.56
SMARCD2-210ENST00000584400 GPR151Q8TDV0 419 aa24.82■■□□□ 1.56
SMARCD2-210ENST00000584400 DUSP26Q9BV47 211 aa24.82■■□□□ 1.56
SMARCD2-210ENST00000584400 DPY30Q9C005 99 aa24.82■■□□□ 1.56
SMARCD2-210ENST00000584400 SLC6A15Q9H2J7 730 aa24.82■■□□□ 1.56
SMARCD2-210ENST00000584400 PNPLA3Q9NST1 481 aa24.82■■□□□ 1.56
SMARCD2-210ENST00000584400 ZCCHC3Q9NUD5 404 aaKnown RBP24.82■■□□□ 1.56
SMARCD2-210ENST00000584400 ABCG2Q9UNQ0 655 aa24.82■■□□□ 1.56
SMARCD2-210ENST00000584400 WIF1Q9Y5W5 379 aa24.82■■□□□ 1.56
SMARCD2-210ENST00000584400 C15orf38-AP3S2A0A0A6YYH1 394 aa24.81■■□□□ 1.56
SMARCD2-210ENST00000584400 HDAC3O15379 428 aa24.81■■□□□ 1.56
SMARCD2-210ENST00000584400 SOX30O94993 753 aa24.81■■□□□ 1.56
SMARCD2-210ENST00000584400 IL33O95760 270 aa24.81■■□□□ 1.56
SMARCD2-210ENST00000584400 ACVR2AP27037 513 aa24.81■■□□□ 1.56
SMARCD2-210ENST00000584400 PTGER4P35408 488 aa24.81■■□□□ 1.56
SMARCD2-210ENST00000584400 EMC4Q5J8M3 183 aa24.81■■□□□ 1.56
SMARCD2-210ENST00000584400 PLCZ1Q86YW0 608 aa24.81■■□□□ 1.56
SMARCD2-210ENST00000584400 OR5M9Q8NGP3 310 aa24.81■■□□□ 1.56
SMARCD2-210ENST00000584400 SLC9A6Q92581 669 aa24.81■■□□□ 1.56
SMARCD2-210ENST00000584400 HOXB13Q92826 284 aaPredicted RBP24.81■■□□□ 1.56
SMARCD2-210ENST00000584400 MOAP1Q96BY2 351 aa24.81■■□□□ 1.56
SMARCD2-210ENST00000584400 ATP6V1G3Q96LB4 118 aa24.81■■□□□ 1.56
SMARCD2-210ENST00000584400 SNX8Q9Y5X2 465 aa24.81■■□□□ 1.56
SMARCD2-210ENST00000584400 CROCCQ5TZA2 2017 aa24.8■■□□□ 1.56
SMARCD2-210ENST00000584400 PRSS44E7EML9 344 aa24.8■■□□□ 1.56
SMARCD2-210ENST00000584400 NKX2-2O95096 273 aa24.8■■□□□ 1.56
SMARCD2-210ENST00000584400 CYP4B1P13584 511 aa24.8■■□□□ 1.56
SMARCD2-210ENST00000584400 EVI2BP34910 448 aa24.8■■□□□ 1.56
SMARCD2-210ENST00000584400 TRPC1P48995 793 aa24.8■■□□□ 1.56
SMARCD2-210ENST00000584400 SF3B4Q15427 424 aaKnown RBP eCLIP24.8■■□□□ 1.567e-9■■■■■ 31.4
SMARCD2-210ENST00000584400 SPDYE7PQ495Y7 208 aa24.8■■□□□ 1.56
SMARCD2-210ENST00000584400 BHLHB9Q6PI77 547 aa24.8■■□□□ 1.56
SMARCD2-210ENST00000584400 WDR53Q7Z5U6 358 aaPredicted RBP24.8■■□□□ 1.56
SMARCD2-210ENST00000584400 OR56A1Q8NGH5 318 aa24.8■■□□□ 1.56
SMARCD2-210ENST00000584400 PSMA8Q8TAA3 256 aa24.8■■□□□ 1.56
SMARCD2-210ENST00000584400 RND1Q92730 232 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms