RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 PRSS53Q2L4Q9 553 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CPTPQ5TA50 214 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 PAQR6Q6TCH4 344 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 MCEMP1Q8IX19 187 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 RASGEF1AQ8N9B8 481 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 MCCC1Q96RQ3 725 aaPredicted RBP10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SLC6A15Q9H2J7 730 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 DECR2Q9NUI1 292 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 GPATCH2Q9NW75 528 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 ZNF226Q9NYT6 803 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 IL36AQ9UHA7 158 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CLEC2DQ9UHP7 191 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 LYVE1Q9Y5Y7 322 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 IGLV3-16A0A075B6K0 115 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SOCS6O14544 535 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 NFATC1O95644 943 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 HBQ1P09105 142 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CLEC2LP0C7M8 214 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SSTR4P31391 388 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SPCS3P61009 180 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 RPS13P62277 151 aaKnown RBP10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 HBA1P69905 142 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 RGNQ15493 299 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 BCL7AQ4VC05 210 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 PLA1AQ53H76 456 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 LIPNQ5VXI9 398 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 LRRC70Q7Z2Q7 622 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 DNAJC22Q8N4W6 341 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 FGF14Q92915 247 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 MRGPRX3Q96LB0 322 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 NECTIN4Q96NY8 510 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 LYSMD1Q96S90 227 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 PLA2G2FQ9BZM2 168 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 WDR26Q9H7D7 661 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 ATP13A2Q9NQ11 1180 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CLDND1Q9NY35 253 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 DNAJC27Q9NZQ0 273 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SPASTQ9UBP0 616 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 PSORS1C1Q9UIG5 152 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 FOXD3Q9UJU5 478 aaPredicted RBP10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 PLAGL1Q9UM63 463 aa10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 GPR55Q9Y2T6 319 aaPredicted RBP10.94□□□□□ -0.66
CDK5RAP3-231ENST00000584063 MUC3AQ02505 3323 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 DENND4CQ5VZ89 1909 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 GFYI3L273 518 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 NUAK1O60285 661 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 NR2C1P13056 603 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 GPX2P18283 190 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 PRPS1L1P21108 318 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 PTNP21246 168 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 IGFBP4P22692 258 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CLCNKAP51800 687 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 PDSS1Q5T2R2 415 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 AGTRAPQ6RW13 159 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 PARM1Q6UWI2 310 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SZRD1Q7Z422 152 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 TMPRSS11BQ86T26 416 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SERPINA11Q86U17 422 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 L3MBTL4Q8NA19 623 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 ZNF740Q8NDX6 193 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SIMC1Q8NDZ2 872 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 WDR36Q8NI36 951 aaKnown RBP10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 OTUB2Q96DC9 234 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 ZNF514Q96K75 400 aaPredicted RBP10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 C5orf34Q96MH7 638 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 ATP6V0BQ99437 205 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 NUAK2Q9H093 628 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 FAM83DQ9H4H8 585 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 RPH3ALQ9UNE2 315 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 EXO1Q9UQ84 846 aaKnown RBP10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 PCYT1BQ9Y5K3 369 aaPredicted RBP10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 PRAMEF33A0A0G2JMD5 474 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CLCA1A8K7I4 914 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 PRAMEF10O60809 474 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SPDEFO95238 335 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 IGHEP01854 428 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 MBP02144 154 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 RPLP0P05388 317 aaKnown RBP10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 ELFN1P0C7U0 828 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 JUPP14923 745 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CYP2A7P20853 494 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 CDC34P49427 236 aaPredicted RBP10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 ITGA1P56199 1179 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 PMP22Q01453 160 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 ZNF45Q02386 682 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 MLIPQ5VWP3 458 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 LYPLAL1Q5VWZ2 237 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 TRILQ7L0X0 811 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 RNF130Q86XS8 419 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 TESCQ96BS2 214 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 HRASLS5Q96KN8 279 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 IL17FQ96PD4 163 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 PLSCR3Q9NRY6 295 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 FAM212BQ9NTI7 297 aaPredicted RBP10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 ASIC5Q9NY37 505 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 STOX2Q9P2F5 926 aaPredicted RBP10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 GULP1Q9UBP9 304 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 SNX7Q9UNH6 387 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 PCDHB11Q9Y5F2 797 aa10.93□□□□□ -0.66
CDK5RAP3-231ENST00000584063 LAMA1P25391 3075 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms