RNA–Protein interactions for RNA: ENST00000582583.4

CCDC144NL-AS1-216, CCDC144NL antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene CCDC144NL-AS1, Length 1,670 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-AS1-216ENST00000582583 WBP1Q96G27 269 aa11.5□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 VMP1Q96GC9 406 aa11.5□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 ART5Q96L15 291 aa11.5□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 ZNF583Q96ND8 569 aa11.5□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 BDH2Q9BUT1 245 aa11.5□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 CNPPD1Q9BV87 410 aa11.5□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 CHID1Q9BWS9 393 aa11.5□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 CXorf21Q9HAI6 301 aa11.5□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 SMPD3Q9NY59 655 aaPredicted RBP11.5□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 TAS2R7Q9NYW3 318 aa11.5□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 USP22Q9UPT9 525 aa11.5□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 CACNA1GO43497 2377 aa11.5□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 ATMQ13315 3056 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 DOCK10Q96BY6 2186 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 RNF103-CHMP3A0A140T963 221 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 PDLIM1O00151 329 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 EI24O14681 340 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 SCAMP2O15127 329 aaKnown RBP11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 TBX19O60806 448 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 DEAF1O75398 565 aaPredicted RBP11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 ATP1B1P05026 303 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 ALPPP05187 535 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 PGRP06401 933 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 NTSP30990 170 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 RPL3P39023 403 aaKnown RBP11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 CAPGP40121 348 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 GPR143P51810 404 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 PDE7AQ13946 482 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 ZNF267Q14586 743 aaPredicted RBP11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 CEBPEQ15744 281 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 MAPKAPK3Q16644 382 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 PRSS53Q2L4Q9 553 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 FAM174BQ3ZCQ3 159 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 FAM98BQ52LJ0 330 aaKnown RBP11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 LRIF1Q5T3J3 769 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 AGAP7PQ5VUJ5 663 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 ANKRD26P1Q6NSI1 321 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 USP51Q70EK9 711 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 GALNT12Q8IXK2 581 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 MSRB3Q8IXL7 192 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 CCDC116Q8IYX3 515 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 OR2T12Q8NG77 320 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 ADAMTS16Q8TE57 1224 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 ZNF721Q8TF20 911 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 PSMF1Q92530 271 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 PPCDCQ96CD2 204 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 MTERF3Q96E29 417 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 ZNF764Q96H86 408 aaPredicted RBP11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 SENP5Q96HI0 755 aaPredicted RBP11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 FBXL20Q96IG2 436 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 AGAP4Q96P64 663 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 BBS4Q96RK4 519 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 SMAD5Q99717 465 aaKnown RBP11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 SH3GL3Q99963 347 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 NPDC1Q9NQX5 325 aaPredicted RBP11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 VAPAQ9P0L0 249 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 SH3BP4Q9P0V3 963 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 PTGFRNQ9P2B2 879 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 COPS7AQ9UBW8 275 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 ERVK-19Q9WJR5 959 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 CROCCQ5TZA2 2017 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 TRBV11-1A0A0K0K1C0 115 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 GABRR3A8MPY1 467 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 FAM220BPB1ANY3 271 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 HRKO00198 91 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 CLOCKO15516 846 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 ERN1O75460 977 aaKnown RBP11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 GMNNO75496 209 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 CT62P0C5K7 136 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 SFTPCP11686 197 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 HOXB9P17482 250 aaPredicted RBP11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 DDX5P17844 614 aaKnown RBP11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 PRPS1L1P21108 318 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 MPIP34949 423 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 PTGER1P34995 402 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 CLDN8P56748 225 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 LY6DQ14210 128 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 ZNF385BQ569K4 471 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 RUNDC3AQ59EK9 446 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 CRB2Q5IJ48 1285 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 SPANXN4Q5MJ08 99 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 TCTN3Q6NUS6 607 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 ISLR2Q6UXK2 745 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 ZNF321PQ8N8H1 164 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 ZFP28Q8NHY6 868 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 C9orf43Q8TAL5 461 aaPredicted RBP11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 SUN3Q8TAQ9 357 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 TESCQ96BS2 214 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 YTHDF1Q9BYJ9 559 aaKnown RBP11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 DEFB126Q9BYW3 111 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 SEMA4CQ9C0C4 833 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 SLC25A37Q9NYZ2 338 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 ATP6V1HQ9UI12 483 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 ZNF223Q9UK11 482 aaPredicted RBP11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 MAPRE3Q9UPY8 281 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 TP53TG5Q9Y2B4 290 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 PCDHGB7Q9Y5F8 929 aa11.49□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 A0A087WXM4 84 aa11.48□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 A0A096LPI6 279 aa11.48□□□□□ -0.57
CCDC144NL-AS1-216ENST00000582583 MYO1GB0I1T2 1018 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms