RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 CYP51A1Q16850 503 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 TMTC4Q5T4D3 741 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 FAM71E1Q6IPT2 247 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 LCN8Q6JVE9 175 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 ERICH5Q6P6B1 374 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 FIGLAQ6QHK4 219 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 MED25Q71SY5 747 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 ABHD13Q7L211 337 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 ZNF227Q86WZ6 799 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 TICAM1Q8IUC6 712 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 OR4A15Q8NGL6 344 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 CREB3L4Q8TEY5 395 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 C17orf62Q9BQA9 187 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 PAIP1Q9H074 479 aaKnown RBP9.56□□□□□ -0.88
SS18-221ENST00000582448 RAB33BQ9H082 229 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 VCXQ9H320 206 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 YY1AP1Q9H869 796 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 DDX31Q9H8H2 851 aaKnown RBP9.56□□□□□ -0.88
SS18-221ENST00000582448 GIMAP4Q9NUV9 329 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 LYARQ9NX58 379 aaKnown RBP9.56□□□□□ -0.88
SS18-221ENST00000582448 VAPAQ9P0L0 249 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 AP4S1Q9Y587 144 aa9.56□□□□□ -0.88
SS18-221ENST00000582448 A0A1W2PRB8 838 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 DHRS12A0PJE2 317 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 ELOVL7A1L3X0 281 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 OR2A25A4D2G3 310 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 CLIC1O00299 241 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 TXNDC9O14530 226 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 PDPK1O15530 556 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 ZSCAN9O15535 394 aaPredicted RBP9.55□□□□□ -0.88
SS18-221ENST00000582448 TBX19O60806 448 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 CEACAM4O75871 244 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 SCELO95171 688 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 KRT75O95678 551 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 C8BP07358 591 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 FAM58BPP0C7Q3 252 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 PIM1P11309 404 aaPredicted RBP9.55□□□□□ -0.88
SS18-221ENST00000582448 FCGR1AP12314 374 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 CDH3P22223 829 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 HIST1H1TP22492 207 aaPredicted RBP9.55□□□□□ -0.88
SS18-221ENST00000582448 SLC7A1P30825 629 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 SKP1P63208 163 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 ATP1A4Q13733 1029 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 FXNQ16595 210 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 ADPRMQ3LIE5 342 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 SPDYE7PQ495Y7 208 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 ZC3H12BQ5HYM0 836 aaKnown RBP9.55□□□□□ -0.88
SS18-221ENST00000582448 GLYATQ6IB77 296 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 ANKRD26P1Q6NSI1 321 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 TRIM73Q86UV7 250 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 ZCCHC7Q8N3Z6 543 aaKnown RBP9.55□□□□□ -0.88
SS18-221ENST00000582448 D2HGDHQ8N465 521 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 OR10A6Q8NH74 314 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 ZFP28Q8NHY6 868 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.55□□□□□ -0.88
SS18-221ENST00000582448 NT5CQ8TCD5 201 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 ADAMTS17Q8TE56 1095 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 NCLNQ969V3 563 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 FAM162AQ96A26 154 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 PPWD1Q96BP3 646 aaKnown RBP9.55□□□□□ -0.88
SS18-221ENST00000582448 ZNF501Q96CX3 271 aaPredicted RBP9.55□□□□□ -0.88
SS18-221ENST00000582448 MS4A6EQ96DS6 147 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 ZNF764Q96H86 408 aaPredicted RBP9.55□□□□□ -0.88
SS18-221ENST00000582448 SMAD5Q99717 465 aaKnown RBP9.55□□□□□ -0.88
SS18-221ENST00000582448 ZFYVE21Q9BQ24 234 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 TACO1Q9BSH4 297 aaKnown RBP9.55□□□□□ -0.88
SS18-221ENST00000582448 INPP5KQ9BT40 448 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 SPATA9Q9BWV2 254 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 PIF1Q9H611 641 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 SERHLQ9NQF3 203 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 PSME2Q9UL46 239 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 AURKCQ9UQB9 309 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 KLHL20Q9Y2M5 609 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 KLK4Q9Y5K2 254 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 SPACA6W5XKT8 324 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 ANKRD12Q6UB98 2062 aa9.55□□□□□ -0.88
SS18-221ENST00000582448 TRBV5-3A0A0A0MS03 114 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 A0A0J9YVX5 310 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 TCRBV3S1A0A5B6 114 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 TLCD2A6NGC4 264 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 FAM220BPB1ANY3 271 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 RTCAO00442 366 aaKnown RBP9.54□□□□□ -0.88
SS18-221ENST00000582448 HNRNPRO43390 633 aaKnown RBP9.54□□□□□ -0.88
SS18-221ENST00000582448 ZBTB11O95625 1053 aaPredicted RBP9.54□□□□□ -0.88
SS18-221ENST00000582448 ABCB1P08183 1280 aaPredicted RBP9.54□□□□□ -0.88
SS18-221ENST00000582448 RAB40ALP0C0E4 278 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 NTSP30990 170 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 TLX1P31314 330 aaPredicted RBP9.54□□□□□ -0.88
SS18-221ENST00000582448 SOAT1P35610 550 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 CHI3L1P36222 383 aaPredicted RBP9.54□□□□□ -0.88
SS18-221ENST00000582448 LIMS1P48059 325 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 RRADP55042 308 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 PHC1P78364 1004 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 SLAMF1Q13291 335 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 TRIP10Q15642 601 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 VMACQ2NL98 169 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 IRAK1BP1Q5VVH5 260 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 MLIPQ5VWP3 458 aa9.54□□□□□ -0.88
SS18-221ENST00000582448 SP5Q6BEB4 398 aaPredicted RBP9.54□□□□□ -0.88
SS18-221ENST00000582448 NIPAL1Q6NVV3 410 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms