RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	SLC25A35	Q3KQZ1	300 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	VPS26B	Q4G0F5	336 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	RFTN2	Q52LD8	501 aa	Predicted RBP	11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	XKR7	Q5GH72	579 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ZCCHC12	Q6PEW1	402 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ANGPTL8	Q6UXH0	198 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	NPSR1	Q6W5P4	371 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	LARP4	Q71RC2	724 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	PLCZ1	Q86YW0	608 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	LACC1	Q8IV20	430 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	SLC44A2	Q8IWA5	706 aa	Predicted RBP	11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	DDIAS	Q8IXT1	998 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	OR2T11	Q8NH01	316 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	HOXB13	Q92826	284 aa	Predicted RBP	11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	PPCDC	Q96CD2	204 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	NODAL	Q96S42	347 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ADO	Q96SZ5	270 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	TIMP4	Q99727	224 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	LMF2	Q9BU23	707 aa	Known RBP	11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	OR2B2	Q9GZK3	357 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	SLC6A15	Q9H2J7	730 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708		Q9N2J8	555 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	SDHAF3	Q9NRP4	125 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	WIF1	Q9Y5W5	379 aa		11.49	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	CD8B2	A6NJW9	211 aa		11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	GNB5	O14775	395 aa		11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	LYPLA1	O75608	230 aa	Predicted RBP	11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	TOX	O94900	526 aa		11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	SOX30	O94993	753 aa		11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	PRPS2	P11908	318 aa		11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	BCKDHA	P12694	445 aa		11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	CPN1	P15169	458 aa		11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	LCN1	P31025	176 aa		11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	HPCAL1	P37235	193 aa		11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	TRPC1	P48995	793 aa		11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	CLK3	P49761	638 aa	Known RBP	11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	RPL38	P63173	70 aa	Known RBP	11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	TFF3	Q07654	80 aa		11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ZNF844	Q08AG5	666 aa		11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ZNF155	Q12901	538 aa	Predicted RBP	11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	MAD2L1	Q13257	205 aa	Predicted RBP	11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	DECR1	Q16698	335 aa		11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	SH2D4B	Q5SQS7	431 aa		11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ENPP6	Q6UWR7	440 aa		11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	TMEM107	Q6UX40	140 aa		11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	NUDCD3	Q8IVD9	361 aa		11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	RPRML	Q8N4K4	120 aa		11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	WDSUB1	Q8N9V3	476 aa		11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	FAM83F	Q8NEG4	500 aa	Predicted RBP	11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	OR10Q1	Q8NGQ4	319 aa		11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ZPLD1	Q8TCW7	415 aa		11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ABTB1	Q969K4	478 aa	Predicted RBP	11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	EGLN2	Q96KS0	407 aa		11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	MECR	Q9BV79	373 aa		11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	TRIM8	Q9BZR9	551 aa		11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	CALHM2	Q9HA72	323 aa		11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ATP6V1H	Q9UI12	483 aa		11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	CBLC	Q9ULV8	474 aa		11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	MAPRE3	Q9UPY8	281 aa		11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	NCKAP5	O14513	1909 aa		11.48	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	FBN2	P35556	2912 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	FREM3	P0C091	2139 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	PIP5K1B	O14986	540 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ZWINT	O95229	277 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	HSPA4L	O95757	839 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	IL33	O95760	270 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	MYZAP	P0CAP1	466 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	BMP7	P18075	431 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	CAPN3	P20807	821 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	GRK2	P25098	689 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	MSX1	P28360	303 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	SRD5A2	P31213	254 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	CEACAM8	P31997	349 aa	Predicted RBP	11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	GPC1	P35052	558 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	MAP3K8	P41279	467 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	KIR3DL1	P43629	444 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	SERPINB4	P48594	390 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	MANF	P55145	182 aa	Known RBP	11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	EEF1A1	P68104	462 aa	Known RBP	11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	TOMM20	Q15388	145 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	BCL2A1	Q16548	175 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	PRSS53	Q2L4Q9	553 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ACSF3	Q4G176	576 aa	Predicted RBP	11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ATP6AP1L	Q52LC2	224 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	TNFAIP8L3	Q5GJ75	292 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	EEF1A1P5	Q5VTE0	462 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	NSUN5P2	Q63ZY6	315 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	AAGAB	Q6PD74	315 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	CCDC71	Q8IV32	467 aa	Predicted RBP	11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	CDRT4	Q8N9R6	151 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	PPP1R14C	Q8TAE6	165 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	LRRC46	Q96FV0	321 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	PGM2	Q96G03	612 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	ZFP3	Q96NJ6	502 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	TSSK3	Q96PN8	268 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	UCN2	Q96RP3	112 aa		11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	PRPF18	Q99633	342 aa	Known RBP	11.47	□□□□□ -0.57
CDK5RAP3-222	ENST00000581708	UGT2B28	Q9BY64	529 aa		11.47	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 36 ms