RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 ERVK-19Q9WJR5 959 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 MRPS33Q9Y291 106 aaKnown RBP3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 MAN2B2Q9Y2E5 1009 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 INTS1Q8N201 2190 aaKnown RBP3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 RELNP78509 3460 aa3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 USP9XQ93008 2570 aaPredicted RBP3.5□□□□□ -1.85
SMARCE1-215ENST00000578995 FREM1Q5H8C1 2179 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 PCNX1Q96RV3 2341 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 HELZ2Q9BYK8 2649 aaKnown RBP3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 TRBV11-1A0A0K0K1C0 115 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 SYNDIG1LA6NDD5 238 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 A8MUA0 341 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 CAPN14A8MX76 684 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 E9PBE3 544 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 PSMD12O00232 456 aaPredicted RBP3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 RNASET2O00584 256 aaKnown RBP3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 FBP2O00757 339 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 CLDN4O14493 209 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 TO15178 435 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 UBDO15205 165 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 PDPK1O15530 556 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 TSPAN2O60636 221 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 KLHL41O60662 606 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 DIAPH2O60879 1101 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 GUCY1B2O75343 617 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 ERAL1O75616 437 aaKnown RBP3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 NEURL1O76050 574 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 WISP2O76076 250 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 SORBS2O94875 1100 aaKnown RBP3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 NKX2-2O95096 273 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 C6orf47O95873 294 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 IGKV1D-16P01601 117 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 ACP2P11117 423 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 IDO1P14902 403 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 EFNA1P20827 205 aaPredicted RBP3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 LMO1P25800 156 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 PIK3R1P27986 724 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 MAPK1P28482 360 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 PTGDSP41222 190 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 MC3RP41968 323 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 KIR2DL2P43627 348 aaPredicted RBP3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 LIMS1P48059 325 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 ALDH9A1P49189 494 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 MLF1P58340 268 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 IRX1P78414 480 aaPredicted RBP3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 PSG6Q00889 435 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 PLIN5Q00G26 463 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 RHDQ02161 417 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 TEKQ02763 1124 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 STX4Q12846 297 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 MAD2L1Q13257 205 aaPredicted RBP3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 KCNAB2Q13303 367 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 BIKQ13323 160 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 MFAP5Q13361 173 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 EXOSC7Q15024 291 aaKnown RBP3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 EXT1Q16394 746 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 GSTA3Q16772 222 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 BTBD16Q32M84 506 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 ZNF791Q3KP31 576 aaPredicted RBP3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 FAM174BQ3ZCQ3 159 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 GTDC1Q4AE62 458 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 SOWAHCQ53LP3 525 aaPredicted RBP3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 PAGE3Q5JUK9 113 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 LRIF1Q5T3J3 769 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 METTL21CQ5VZV1 264 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 SAXO2Q658L1 398 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 FAM91A1Q658Y4 838 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 FCRLBQ6BAA4 426 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 TCTN3Q6NUS6 607 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 JMJD6Q6NYC1 403 aaPredicted RBP3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 C8orf82Q6P1X6 216 aaPredicted RBP3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 DLEU7Q6UYE1 221 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 TMEM64Q6YI46 380 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 Q6ZS92 163 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 KBTBD2Q8IY47 623 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 FAM9CQ8IZT9 166 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 CLEC4FQ8N1N0 589 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 GALNT16Q8N428 558 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 SIRT6Q8N6T7 355 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 C17orf47Q8NEP4 570 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 ADCY4Q8NFM4 1077 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 C16orf52Q8NHV5 167 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 NUBPLQ8TB37 319 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 FAM110BQ8TC76 370 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 MIPOL1Q8TD10 442 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 APOBEC4Q8WW27 367 aaKnown RBP3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 DYDC1Q8WWB3 177 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 GTF2H4Q92759 462 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 KAT2AQ92830 837 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 RIT1Q92963 219 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 HGDQ93099 445 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 VPS33AQ96AX1 596 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 PPCDCQ96CD2 204 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 ERP27Q96DN0 273 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 FAM120BQ96EK7 910 aaKnown RBP3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 CHMP6Q96FZ7 201 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 VMP1Q96GC9 406 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 SCMH1Q96GD3 660 aa3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 SENP5Q96HI0 755 aaPredicted RBP3.49□□□□□ -1.85
SMARCE1-215ENST00000578995 THOC3Q96J01 351 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms