RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 LHX9Q9NQ69 397 aa4.56□□□□□ -1.68
IFT20-205ENST00000578009 PRDM8Q9NQV8 689 aa4.56□□□□□ -1.68
IFT20-205ENST00000578009 POT1Q9NUX5 634 aa4.56□□□□□ -1.68
IFT20-205ENST00000578009 LYARQ9NX58 379 aaKnown RBP4.56□□□□□ -1.68
IFT20-205ENST00000578009 TAAR2Q9P1P5 351 aa4.56□□□□□ -1.68
IFT20-205ENST00000578009 ZNF624Q9P2J8 865 aaPredicted RBP4.56□□□□□ -1.68
IFT20-205ENST00000578009 TBC1D29Q9UFV1 150 aa4.56□□□□□ -1.68
IFT20-205ENST00000578009 C3orf18Q9UK00 162 aa4.56□□□□□ -1.68
IFT20-205ENST00000578009 PSME2Q9UL46 239 aa4.56□□□□□ -1.68
IFT20-205ENST00000578009 PLAGL1Q9UM63 463 aa4.56□□□□□ -1.68
IFT20-205ENST00000578009 PLEKHM1Q9Y4G2 1056 aa4.56□□□□□ -1.68
IFT20-205ENST00000578009 NOX1Q9Y5S8 564 aa4.56□□□□□ -1.68
IFT20-205ENST00000578009 CFAP20Q9Y6A4 193 aaKnown RBP4.56□□□□□ -1.68
IFT20-205ENST00000578009 ARHGEF17Q96PE2 2063 aaPredicted RBP4.56□□□□□ -1.68
IFT20-205ENST00000578009 COL4A2P08572 1712 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 PCM1Q15154 2024 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 SPTY2D1-AS1A0A0U1RR47 76 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 PRR23AA6NEV1 266 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 URADA6NGE7 173 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 OR52A4PA6NMU1 304 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 MYO1GB0I1T2 1018 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 E9PQ18 207 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 M0QX08 132 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 ZNF701M0R085 212 aaPredicted RBP4.55□□□□□ -1.68
IFT20-205ENST00000578009 SAP18O00422 153 aaKnown RBP4.55□□□□□ -1.68
IFT20-205ENST00000578009 PLOD2O00469 737 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 ADAMDEC1O15204 470 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 KIF1CO43896 1103 aaKnown RBP4.55□□□□□ -1.68
IFT20-205ENST00000578009 TMPRSS11DO60235 418 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 MRPS14O60783 128 aaKnown RBP4.55□□□□□ -1.68
IFT20-205ENST00000578009 UGT2B11O75310 529 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 E2F6O75461 281 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 JRKO75564 520 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 PDE9AO76083 593 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 SNAP29O95721 258 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 ZNF682O95780 498 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 IGHV4-34P06331 123 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 TFPTP0C1Z6 253 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 JMJD7P0C870 316 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 SMIM10L1P0DMW3 83 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 CHRNB1P11230 501 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 ZNF10P21506 573 aaPredicted RBP4.55□□□□□ -1.68
IFT20-205ENST00000578009 HIST1H1TP22492 207 aaPredicted RBP4.55□□□□□ -1.68
IFT20-205ENST00000578009 ATP5A1P25705 553 aaKnown RBP4.55□□□□□ -1.68
IFT20-205ENST00000578009 PSMB5P28074 263 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 PEBP1P30086 187 aaKnown RBP4.55□□□□□ -1.68
IFT20-205ENST00000578009 RYKP34925 604 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 CHI3L1P36222 383 aaPredicted RBP4.55□□□□□ -1.68
IFT20-205ENST00000578009 ACTR1BP42025 376 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 CRATP43155 626 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 SSR2P43308 183 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 PXNP49023 591 aaPredicted RBP4.55□□□□□ -1.68
IFT20-205ENST00000578009 HLCSP50747 726 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 CRYBA2P53672 197 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 MANFP55145 182 aaKnown RBP4.55□□□□□ -1.68
IFT20-205ENST00000578009 CLDN2P57739 230 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 DSTNP60981 165 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 CXCR4P61073 352 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 ACTR1AP61163 376 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 KCNJ10P78508 379 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 CDK6Q00534 326 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 SCARB2Q14108 478 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 CEBPEQ15744 281 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 ALG11Q2TAA5 492 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 LRRC23Q53EV4 343 aaPredicted RBP4.55□□□□□ -1.68
IFT20-205ENST00000578009 RBM48Q5RL73 367 aaKnown RBP4.55□□□□□ -1.68
IFT20-205ENST00000578009 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.55□□□□□ -1.68
IFT20-205ENST00000578009 OTUD3Q5T2D3 398 aaPredicted RBP4.55□□□□□ -1.68
IFT20-205ENST00000578009 RNF220Q5VTB9 566 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 KDM4DQ6B0I6 523 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 ANKRD26P1Q6NSI1 321 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 REEP3Q6NUK4 255 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 DUS1LQ6P1R4 473 aaKnown RBP4.55□□□□□ -1.68
IFT20-205ENST00000578009 FAHD1Q6P587 224 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 ZNF852Q6ZMS4 543 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 Q6ZSR6 202 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 TMEM26Q6ZUK4 368 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 IQCHQ86VS3 1027 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 CACUL1Q86Y37 369 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 NRROSQ86YC3 692 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 ARMC8Q8IUR7 673 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 CLEC4FQ8N1N0 589 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 SDR16C5Q8N3Y7 309 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 C2orf73Q8N5S3 287 aaPredicted RBP4.55□□□□□ -1.68
IFT20-205ENST00000578009 ACOT4Q8N9L9 421 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 SETD9Q8NE22 299 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 ZNF555Q8NEP9 628 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 FLVCR1-AS1Q8TAF5 88 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 MIPOL1Q8TD10 442 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 CYGBQ8WWM9 190 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 RASSF5Q8WWW0 418 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 RSC1A1Q92681 617 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 HDAC2Q92769 488 aaKnown RBP4.55□□□□□ -1.68
IFT20-205ENST00000578009 TSACCQ96A04 125 aaPredicted RBP4.55□□□□□ -1.68
IFT20-205ENST00000578009 ERLEC1Q96DZ1 483 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 TM4SF19Q96DZ7 209 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 SMIM10Q96HG1 83 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 CNDP2Q96KP4 475 aaKnown RBP4.55□□□□□ -1.68
IFT20-205ENST00000578009 TUBA1CQ9BQE3 449 aa4.55□□□□□ -1.68
IFT20-205ENST00000578009 PSD2Q9BQI7 771 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms