RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 SLC31A1O15431 190 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 NUDT7P0C024 238 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 ARSBP15848 533 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 HLA-DMAP28067 261 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 SOX2P48431 317 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 DLX5P56178 289 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 RAP2BP61225 183 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 NDUFAF5Q5TEU4 345 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 PODNL1Q6PEZ8 512 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 TMEM205Q6UW68 189 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 ZNF584Q8IVC4 421 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 OR4N4Q8N0Y3 316 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 FBXO15Q8NCQ5 510 aaPredicted RBP9.81□□□□□ -0.84
PTPRM-205ENST00000577827 SORCS1Q8WY21 1168 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 G6PC3Q9BUM1 346 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 SLC6A16Q9GZN6 736 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 C11orf54Q9H0W9 315 aaPredicted RBP9.81□□□□□ -0.84
PTPRM-205ENST00000577827 B3GNT2Q9NY97 397 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 SLCO3A1Q9UIG8 710 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 A0A1B0GVT2 93 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 TEX28O15482 410 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 TGM6O95932 706 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 GJA1P17302 382 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 FSHRP23945 695 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 AK4P27144 223 aaPredicted RBP9.81□□□□□ -0.84
PTPRM-205ENST00000577827 PGDP52209 483 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 EMP3P54852 163 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 ARHGAP19Q14CB8 494 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 CATSPEREQ5SY80 951 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 ERN2Q76MJ5 926 aaKnown RBP9.81□□□□□ -0.84
PTPRM-205ENST00000577827 FAM124AQ86V42 546 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 TTC9BQ8N6N2 239 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 NLGN2Q8NFZ4 835 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 SAMD8Q96LT4 415 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 OR5M11Q96RB7 305 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 RBCK1Q9BYM8 510 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 EVA1AQ9H8M9 152 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 SLC28A3Q9HAS3 691 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 NDUFAF4Q9P032 175 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 NAALAD2Q9Y3Q0 740 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 BLOC1S5-TXNDC5H3BN57 136 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 ADAM23O75077 832 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 GASTP01350 101 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 NAA10P41227 235 aaPredicted RBP9.81□□□□□ -0.84
PTPRM-205ENST00000577827 BTG1P62324 171 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 TSPAN31Q12999 210 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 AQP6Q13520 282 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 LDLRAD1Q5T700 205 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 NADSYN1Q6IA69 706 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 GDPD3Q7L5L3 318 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 PDZD3Q86UT5 571 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 ZNF101Q8IZC7 436 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 ZNF366Q8N895 744 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 SFXN5Q8TD22 340 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 METTL21AQ8WXB1 218 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 ASB12Q8WXK4 309 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 IL17FQ96PD4 163 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 GAL3ST4Q96RP7 486 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 DPH7Q9BTV6 452 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 PLAC1Q9HBJ0 212 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 A0A0G2JMP0 313 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 C13orf42A0A1B0GVH6 325 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 GABRPO00591 440 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 FKTNO75072 461 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 C1QBP02746 253 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 S1PR1P21453 382 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 PRKXP51817 358 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 PRMT2P55345 433 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 RAB5BP61020 215 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 CRHR2Q13324 411 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 GK2Q14410 553 aaPredicted RBP9.81□□□□□ -0.84
PTPRM-205ENST00000577827 GRIN2CQ14957 1233 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 AMZ1Q400G9 498 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 IER5LQ5T953 404 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 HBMQ6B0K9 141 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 CNKSR3Q6P9H4 555 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 ASPGQ86U10 573 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 DTX3Q8N9I9 347 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 OR4M2Q8NGB6 313 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 DEFB118Q96PH6 123 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 TBL1XR1Q9BZK7 514 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 FN3KQ9H479 309 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 MEPEQ9NQ76 525 aaPredicted RBP9.81□□□□□ -0.84
PTPRM-205ENST00000577827 RXFP3Q9NSD7 469 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 LHX3Q9UBR4 397 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 FBXO9Q9UK97 447 aaPredicted RBP9.81□□□□□ -0.84
PTPRM-205ENST00000577827 GJD2Q9UKL4 321 aa9.81□□□□□ -0.84
PTPRM-205ENST00000577827 A0A1B0GVC2 190 aa9.8□□□□□ -0.84
PTPRM-205ENST00000577827 A0A1W2PPK0 400 aa9.8□□□□□ -0.84
PTPRM-205ENST00000577827 ZNF8P17098 575 aaPredicted RBP9.8□□□□□ -0.84
PTPRM-205ENST00000577827 IL32P24001 234 aa9.8□□□□□ -0.84
PTPRM-205ENST00000577827 PSPHP78330 225 aa9.8□□□□□ -0.84
PTPRM-205ENST00000577827 CTF1Q16619 201 aa9.8□□□□□ -0.84
PTPRM-205ENST00000577827 PGGHGQ32M88 737 aa9.8□□□□□ -0.84
PTPRM-205ENST00000577827 LRIT3Q3SXY7 679 aa9.8□□□□□ -0.84
PTPRM-205ENST00000577827 FAM205BPQ63HN1 556 aa9.8□□□□□ -0.84
PTPRM-205ENST00000577827 TIGD3Q6B0B8 471 aa9.8□□□□□ -0.84
PTPRM-205ENST00000577827 FAAH2Q6GMR7 532 aa9.8□□□□□ -0.84
PTPRM-205ENST00000577827 ZNF440Q8IYI8 595 aa9.8□□□□□ -0.84
PTPRM-205ENST00000577827 OR6N2Q8NGY6 317 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms