RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 OR5L2Q8NGL0 311 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 FAM110BQ8TC76 370 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 PMM1Q92871 262 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 NCLNQ969V3 563 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 ZNF583Q96ND8 569 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 SERHL2Q9H4I8 314 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 IKZF5Q9H5V7 419 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 TMEM38AQ9H6F2 299 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 SPAG4Q9NPE6 437 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 CMTM6Q9NX76 183 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 COPS7AQ9UBW8 275 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 FBXL4Q9UKA2 621 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 PRPF19Q9UMS4 504 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 ZNF451Q9Y4E5 1061 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 PCDHGB3Q9Y5G1 929 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 SNX8Q9Y5X2 465 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 PCSK5Q92824 1860 aa10.31□□□□□ -0.76
CDK5RAP3-204ENST00000577664 ANKHD1Q8IWZ3 2542 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 A8MUA0 341 aa10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 ACOX3O15254 700 aa10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 ZFAND5O76080 213 aa10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 SEC24DO94855 1032 aaPredicted RBP10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 C1QCP02747 245 aa10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 HSD17B1P14061 328 aa10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 NAGAP17050 411 aa10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 MATN1P21941 496 aa10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 OTX2P32243 289 aa10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 CHI3L1P36222 383 aaPredicted RBP10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 CPA2P48052 419 aa10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 ANXA11P50995 505 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 PGDP52209 483 aa10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 EEFSECP57772 596 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 SLC25A3Q00325 362 aa10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 EEF1A2Q05639 463 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 RBBP4Q09028 425 aa10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 Q0VFX4 171 aa10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 AIMP2Q13155 320 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 EXOSC7Q15024 291 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 EBPQ15125 230 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 ADRM1Q16186 407 aa10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 ZSCAN26Q16670 478 aa10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 CYP27C1Q4G0S4 372 aa10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 DNAL1Q4LDG9 190 aa10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 PGM2L1Q6PCE3 622 aa10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 HSDL2Q6YN16 418 aa10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 VASH2Q86V25 355 aa10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 APLFQ8IW19 511 aaPredicted RBP10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 C9orf40Q8IXQ3 194 aa10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 SLC15A4Q8N697 577 aa10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 CHDHQ8NE62 594 aaPredicted RBP10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 PSMF1Q92530 271 aa10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 HSPBAP1Q96EW2 488 aa10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 THUMPD3Q9BV44 507 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 CNPPD1Q9BV87 410 aa10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 OR8D2Q9GZM6 311 aa10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 LRMDAQ9H2I8 198 aa10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 ANKRA2Q9H9E1 313 aa10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 FOLH1BQ9HBA9 442 aa10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 ATP13A2Q9NQ11 1180 aa10.3□□□□□ -0.76
CDK5RAP3-204ENST00000577664 NIPBLQ6KC79 2804 aaeCLIP10.29□□□□□ -0.766e-6■■■□□ 16.7
CDK5RAP3-204ENST00000577664 C2orf92A0A1B0GVN3 265 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 FRG2CA6NGY1 282 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 HMGN4O00479 90 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 NME4O00746 187 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 GYG2O15488 501 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 GSC2O15499 205 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 NKX2-8O15522 239 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 AK1P00568 194 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 TFPTP0C1Z6 253 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 LCN1P31025 176 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 PTGER1P34995 402 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 PRKAG1P54619 331 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 RRADP55042 308 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 MLLT10P55197 1068 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 NCALDP61601 193 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 TP53BP2Q13625 1128 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 ATP1A4Q13733 1029 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 VEZF1Q14119 521 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 CAPRIN1Q14444 709 aaKnown RBP10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 LASP1Q14847 261 aaKnown RBP10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 BTBD16Q32M84 506 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 ARHGAP11BQ3KRB8 267 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 SPDYE7PQ495Y7 208 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 PIGGQ5H8A4 983 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 RABL3Q5HYI8 236 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 COX20Q5RI15 118 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 PRAMEF8Q5VWM4 474 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 PRAMEF7Q5VXH5 474 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 SLC29A4Q7RTT9 530 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 RNF130Q86XS8 419 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 KBTBD2Q8IY47 623 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 DEFB107AQ8IZN7 70 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 CLEC4FQ8N1N0 589 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 C10orf111Q8N326 155 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 HORMAD2Q8N7B1 307 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 SLC16A11Q8NCK7 471 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 OR5AK3PQ8NH89 298 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 OIT3Q8WWZ8 545 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 SLC35A4Q96G79 324 aa10.29□□□□□ -0.76
CDK5RAP3-204ENST00000577664 AURKBQ96GD4 344 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms