RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 CTU2Q2VPK5 515 aaKnown RBP5.26□□□□□ -1.57
SMG6-219ENST00000575663 KHDRBS2Q5VWX1 349 aaKnown RBP5.26□□□□□ -1.57
SMG6-219ENST00000575663 C18orf63Q68DL7 685 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 DRICH1Q6PGQ1 229 aaPredicted RBP5.26□□□□□ -1.57
SMG6-219ENST00000575663 FIGNL1Q6PIW4 674 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 SSX8Q7RTT4 187 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 UBE3DQ7Z6J8 389 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 EXOC3L1Q86VI1 746 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 CTAGE4Q8IX94 777 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 ZNF619Q8N2I2 560 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 NKAPQ8N5F7 415 aaKnown RBP5.26□□□□□ -1.57
SMG6-219ENST00000575663 METTL25Q8N6Q8 603 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 ZNF615Q8N8J6 731 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 SNX31Q8N9S9 440 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 VPS37AQ8NEZ2 397 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 KAT2AQ92830 837 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 GCDHQ92947 438 aaPredicted RBP5.26□□□□□ -1.57
SMG6-219ENST00000575663 RGMAQ96B86 450 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 MSI2Q96DH6 328 aaKnown RBP5.26□□□□□ -1.57
SMG6-219ENST00000575663 PDLIM5Q96HC4 596 aaKnown RBP5.26□□□□□ -1.57
SMG6-219ENST00000575663 RADILQ96JH8 1075 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 OSBPL9Q96SU4 736 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 OCEL1Q9H607 264 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 CBLN4Q9NTU7 201 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 PPP4R1LQ9P1A2 415 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 XPR1Q9UBH6 696 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 POU2F3Q9UKI9 436 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 CLEC4AQ9UMR7 237 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 FKBP7Q9Y680 259 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 CAPN6Q9Y6Q1 641 aa5.26□□□□□ -1.57
SMG6-219ENST00000575663 GOLGA6L10A0A0M3HER8 536 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 TCRBV7S3A2A0A539 114 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 ESYT3A0FGR9 886 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 CCDC189A1A4V9 331 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 OR6C70A6NIJ9 312 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 GLOD5A6NK44 160 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 H0YC42 278 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 H7C417 338 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 PGRMC1O00264 195 aaKnown RBP5.25□□□□□ -1.57
SMG6-219ENST00000575663 ABCD4O14678 606 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 ZIC3O60481 467 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 SH3BGRLO75368 114 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 AQP8O94778 261 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 SYNGR4O95473 234 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 AIFM1O95831 613 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 TGFB1P01137 390 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 CCDC166P0CW27 439 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 PGAM1P18669 254 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 HK1P19367 917 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 CD22P20273 847 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 IL11P20809 199 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 EIF1AXP47813 144 aaKnown RBP5.25□□□□□ -1.57
SMG6-219ENST00000575663 PDLIM4P50479 330 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 EFNA4P52798 201 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 ARFIP1P53367 373 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 SUCLG1P53597 346 aaKnown RBP5.25□□□□□ -1.57
SMG6-219ENST00000575663 TPD52P55327 224 aaPredicted RBP5.25□□□□□ -1.57
SMG6-219ENST00000575663 HNRNPH2P55795 449 aaKnown RBP5.25□□□□□ -1.57
SMG6-219ENST00000575663 CLDN15P56746 228 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 C21orf58P58505 322 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 PSPHP78330 225 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 PHEXP78562 749 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 MRPS22P82650 360 aaKnown RBP5.25□□□□□ -1.57
SMG6-219ENST00000575663 IRF8Q02556 426 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 IFT88Q13099 833 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 CRYMQ14894 314 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 SLMAPQ14BN4 828 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 TAB1Q15750 504 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 CCNG2Q16589 344 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 IQCCQ4KMZ1 466 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 MIDNQ504T8 468 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 CCDC92Q53HC0 331 aaPredicted RBP5.25□□□□□ -1.57
SMG6-219ENST00000575663 SWT1Q5T5J6 900 aaKnown RBP5.25□□□□□ -1.57
SMG6-219ENST00000575663 GTF2IRD2BQ6EKJ0 949 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 DESI1Q6ICB0 168 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 OR5M10Q6IEU7 315 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 C11orf71Q6IPW1 123 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 MED27Q6P2C8 311 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 CYP20A1Q6UW02 462 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 GALNT7Q86SF2 657 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 GTF2IRD2Q86UP8 949 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 LCA5Q86VQ0 697 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 CCDC25Q86WR0 208 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 CREG2Q8IUH2 290 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 CNTN4Q8IWV2 1026 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 FBXL14Q8N1E6 418 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 MUC15Q8N387 334 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 MMGT1Q8N4V1 131 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 LRRC17Q8N6Y2 441 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 SEMA6DQ8NFY4 1073 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 ZNF473Q8WTR7 871 aaKnown RBP5.25□□□□□ -1.57
SMG6-219ENST00000575663 KCTD4Q8WVF5 259 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 HTRA1Q92743 480 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 KISS1RQ969F8 398 aaPredicted RBP5.25□□□□□ -1.57
SMG6-219ENST00000575663 C3orf49Q96BT1 292 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 WDR34Q96EX3 536 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 COL21A1Q96P44 957 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 BRINP2Q9C0B6 783 aa5.25□□□□□ -1.57
SMG6-219ENST00000575663 BHLHE41Q9C0J9 482 aaPredicted RBP5.25□□□□□ -1.57
SMG6-219ENST00000575663 C12orf49Q9H741 205 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms