RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 Q9N2J8 555 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 V9GYQ6 96 aa22.27■■□□□ 1.16
ATPAF1-213ENST00000574428 NSG1A0A0A6YYJ2 146 aa22.26■■□□□ 1.15
ATPAF1-213ENST00000574428 MASP2O00187 686 aa22.26■■□□□ 1.15
ATPAF1-213ENST00000574428 CELA2AP08217 269 aa22.26■■□□□ 1.15
ATPAF1-213ENST00000574428 CLCN2P51788 898 aa22.26■■□□□ 1.15
ATPAF1-213ENST00000574428 PCBP3P57721 371 aaKnown RBP22.26■■□□□ 1.15
ATPAF1-213ENST00000574428 RNF4P78317 190 aa22.26■■□□□ 1.15
ATPAF1-213ENST00000574428 AAGABQ6PD74 315 aa22.26■■□□□ 1.15
ATPAF1-213ENST00000574428 FIGNL1Q6PIW4 674 aa22.26■■□□□ 1.15
ATPAF1-213ENST00000574428 SLC26A7Q8TE54 656 aa22.26■■□□□ 1.15
ATPAF1-213ENST00000574428 LIN28AQ9H9Z2 209 aaKnown RBP22.26■■□□□ 1.15
ATPAF1-213ENST00000574428 FBXL4Q9UKA2 621 aa22.26■■□□□ 1.15
ATPAF1-213ENST00000574428 OR10H1Q9Y4A9 318 aa22.26■■□□□ 1.15
ATPAF1-213ENST00000574428 PCSK5Q92824 1860 aa22.26■■□□□ 1.15
ATPAF1-213ENST00000574428 TCRBV5S2A0A599 114 aa22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 CDC14CA4D256 554 aa22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 ZIC2O95409 532 aaPredicted RBP22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 PPICP45877 212 aa22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 SESN3P58005 492 aa22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 AP2B1P63010 937 aa22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 MRPS22P82650 360 aaKnown RBP22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 HPCAP84074 193 aa22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 SLC34A1Q06495 639 aa22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 GNA13Q14344 377 aa22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 HLA-DQA1Q5Y7H0 255 aa22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 METTL25Q8N6Q8 603 aa22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 CHDHQ8NE62 594 aaPredicted RBP22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 RSRC1Q96IZ7 334 aaKnown RBP22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 SDF2Q99470 211 aa22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 S100A14Q9HCY8 104 aa22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 FBXO34Q9NWN3 711 aa22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 P4HTMQ9NXG6 502 aa22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 AQP12BA6NM10 295 aa22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 FCMRO60667 390 aa22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 KCNK2O95069 426 aa22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 OPN1SWP03999 348 aa22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 TRHRP34981 398 aaPredicted RBP22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 RFX3P48380 749 aa22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 PTDSS1P48651 473 aaKnown RBP22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 CHRNEQ04844 493 aa22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 SRSF6Q13247 344 aaKnown RBP22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 EXT1Q16394 746 aa22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 CCDC80Q76M96 950 aa22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 HMGN2P46Q86SG4 172 aa22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 RAB43Q86YS6 212 aa22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 AQP12AQ8IXF9 295 aa22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 OR10Q1Q8NGQ4 319 aa22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 THAP3Q8WTV1 239 aaPredicted RBP22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 PYDC1Q8WXC3 89 aa22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 LCORQ96JN0 433 aaPredicted RBP22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 LMF1Q96S06 567 aa22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 SLC38A1Q9H2H9 487 aa22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 DCAF13Q9NV06 445 aaKnown RBP22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 STOML1Q9UBI4 398 aa22.25■■□□□ 1.15
ATPAF1-213ENST00000574428 TCRBV3S1A0A5B6 114 aa22.24■■□□□ 1.15
ATPAF1-213ENST00000574428 FRG2CA6NGY1 282 aa22.24■■□□□ 1.15
ATPAF1-213ENST00000574428 TTC36A6NLP5 189 aa22.24■■□□□ 1.15
ATPAF1-213ENST00000574428 M0QX08 132 aa22.24■■□□□ 1.15
ATPAF1-213ENST00000574428 ZNF682O95780 498 aa22.24■■□□□ 1.15
ATPAF1-213ENST00000574428 ANPEPP15144 967 aa22.24■■□□□ 1.15
ATPAF1-213ENST00000574428 DRD5P21918 477 aa22.24■■□□□ 1.15
ATPAF1-213ENST00000574428 PLAG1Q6DJT9 500 aa22.24■■□□□ 1.15
ATPAF1-213ENST00000574428 FAM86B1Q8N7N1 296 aa22.24■■□□□ 1.15
ATPAF1-213ENST00000574428 ZNF441Q8N8Z8 693 aa22.24■■□□□ 1.15
ATPAF1-213ENST00000574428 BBS10Q8TAM1 723 aa22.24■■□□□ 1.15
ATPAF1-213ENST00000574428 NACC2Q96BF6 587 aa22.24■■□□□ 1.15
ATPAF1-213ENST00000574428 TAMM41Q96BW9 452 aa22.24■■□□□ 1.15
ATPAF1-213ENST00000574428 MKLN1Q9UL63 735 aa22.24■■□□□ 1.15
ATPAF1-213ENST00000574428 CBLCQ9ULV8 474 aa22.24■■□□□ 1.15
ATPAF1-213ENST00000574428 ZNF451Q9Y4E5 1061 aa22.24■■□□□ 1.15
ATPAF1-213ENST00000574428 SPTBN4Q9H254 2564 aa22.24■■□□□ 1.15
ATPAF1-213ENST00000574428 SOX30O94993 753 aa22.23■■□□□ 1.15
ATPAF1-213ENST00000574428 AK1P00568 194 aa22.23■■□□□ 1.15
ATPAF1-213ENST00000574428 IGKV1D-16P01601 117 aa22.23■■□□□ 1.15
ATPAF1-213ENST00000574428 C8BP07358 591 aa22.23■■□□□ 1.15
ATPAF1-213ENST00000574428 NR0B1P51843 470 aaKnown RBP22.23■■□□□ 1.15
ATPAF1-213ENST00000574428 ATP1A4Q13733 1029 aa22.23■■□□□ 1.15
ATPAF1-213ENST00000574428 ENPP6Q6UWR7 440 aa22.23■■□□□ 1.15
ATPAF1-213ENST00000574428 FRRS1Q6ZNA5 592 aa22.23■■□□□ 1.15
ATPAF1-213ENST00000574428 C16orf47Q6ZP98 133 aaPredicted RBP22.23■■□□□ 1.15
ATPAF1-213ENST00000574428 LRRC74BQ6ZQY2 392 aa22.23■■□□□ 1.15
ATPAF1-213ENST00000574428 PATL1Q86TB9 770 aaKnown RBP22.23■■□□□ 1.15
ATPAF1-213ENST00000574428 OR52E4Q8NGH9 312 aa22.23■■□□□ 1.15
ATPAF1-213ENST00000574428 ELP5Q8TE02 316 aa22.23■■□□□ 1.15
ATPAF1-213ENST00000574428 ADAMTS17Q8TE56 1095 aa22.23■■□□□ 1.15
ATPAF1-213ENST00000574428 TACO1Q9BSH4 297 aaKnown RBP22.23■■□□□ 1.15
ATPAF1-213ENST00000574428 ZNF350Q9GZX5 532 aa22.23■■□□□ 1.15
ATPAF1-213ENST00000574428 QRSL1Q9H0R6 528 aaKnown RBP22.23■■□□□ 1.15
ATPAF1-213ENST00000574428 BCL2L10Q9HD36 194 aa22.23■■□□□ 1.15
ATPAF1-213ENST00000574428 ANGPTL2Q9UKU9 493 aa22.23■■□□□ 1.15
ATPAF1-213ENST00000574428 WDR45Q9Y484 360 aa22.23■■□□□ 1.15
ATPAF1-213ENST00000574428 HPP00738 406 aa22.22■■□□□ 1.15
ATPAF1-213ENST00000574428 PIGAP37287 484 aa22.22■■□□□ 1.15
ATPAF1-213ENST00000574428 DCAF7P61962 342 aa22.22■■□□□ 1.15
ATPAF1-213ENST00000574428 RHDQ02161 417 aa22.22■■□□□ 1.15
ATPAF1-213ENST00000574428 CLN3Q13286 438 aa22.22■■□□□ 1.15
ATPAF1-213ENST00000574428 CYBRD1Q53TN4 286 aa22.22■■□□□ 1.15
ATPAF1-213ENST00000574428 MTX3Q5HYI7 312 aa22.22■■□□□ 1.15
ATPAF1-213ENST00000574428 CRB2Q5IJ48 1285 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms