RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 RNF103-CHMP3A0A140T963 221 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 J3QKU1 62 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 RFXANKO14593 260 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 TFECO14948 347 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 SCN2BO60939 215 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 NME6O75414 186 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 NKX2-2O95096 273 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 AGR2O95994 175 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 EDN3P14138 238 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 PLA2G2AP14555 144 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 PIGAP37287 484 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 MASP1P48740 699 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 CLK3P49761 638 aaKnown RBP11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 ANXA11P50995 505 aaKnown RBP11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 PHC1P78364 1004 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 FOXK1P85037 733 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 PMP22Q01453 160 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 GAB1Q13480 694 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 KRTCAP3Q53RY4 240 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 PRAMEF20Q5VT98 475 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 SLC30A6Q6NXT4 461 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 CDC73Q6P1J9 531 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 TMEM81Q6P7N7 255 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 BNC2Q6ZN30 1099 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 C6orf120Q7Z4R8 191 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 WDR53Q7Z5U6 358 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 ZGRF1Q86YA3 2104 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 ZFP62Q8NB50 900 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 OR5AK3PQ8NH89 298 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 GOT1L1Q8NHS2 421 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 HOXB13Q92826 284 aaPredicted RBP11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 ITCHQ96J02 903 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 SLC35G5Q96KT7 338 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 ADOQ96SZ5 270 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 G6PC3Q9BUM1 346 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 TRIM4Q9C037 500 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 HHATLQ9HCP6 504 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 KLRF1Q9NZS2 232 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 CCDC167Q9P0B6 97 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 KLHL14Q9P2G3 628 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 B4GALT7Q9UBV7 327 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 NTNG1Q9Y2I2 539 aa11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.73□□□□□ -0.53
TRAPPC1-206ENST00000573989 CCDC154A6NI56 674 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 C9JVG2 144 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 G3V3Y1 287 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 TSPAN2O60636 221 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 UGT2B11O75310 529 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 IL33O95760 270 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 ATP6V1C1P21283 382 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 MATN1P21941 496 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 LCN1P31025 176 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 MAP3K8P41279 467 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 CASP3P42574 277 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 RFX3P48380 749 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 DNASE1L1P49184 302 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 POU6F2P78424 691 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 TXNL4AP83876 142 aaKnown RBP11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 RCAN2Q14206 197 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 TIGD2Q4W5G0 525 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 AGKQ53H12 422 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 ANGPTL8Q6UXH0 198 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 ZNF621Q6ZSS3 439 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 SLC16A11Q8NCK7 471 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 ST6GALNAC3Q8NDV1 305 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 OR4N2Q8NGD1 307 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 OR9I1Q8NGQ6 314 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 FBXO30Q8TB52 745 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 HGDQ93099 445 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 EFHD2Q96C19 240 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 RMND5BQ96G75 393 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 ZNF597Q96LX8 424 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 ZNF317Q96PQ6 595 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 SLX1AQ9BQ83 275 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 SLC35A5Q9BS91 424 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 YIPF4Q9BSR8 244 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 BTBD2Q9BX70 525 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 OSBPL11Q9BXB4 747 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 ANGPTL4Q9BY76 406 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 PIGUQ9H490 435 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 IL1RL2Q9HB29 575 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 DEPPQ9NTK1 212 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 EXD2Q9NVH0 621 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 GPATCH2Q9NW75 528 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 CNOT11Q9UKZ1 510 aaKnown RBP11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 NBASA2RRP1 2371 aa11.72□□□□□ -0.53
TRAPPC1-206ENST00000573989 ESPL1Q14674 2120 aa11.71□□□□□ -0.53
TRAPPC1-206ENST00000573989 ANKUB1A6NFN9 424 aa11.71□□□□□ -0.53
TRAPPC1-206ENST00000573989 PRAMEF25A6NGN4 478 aa11.71□□□□□ -0.53
TRAPPC1-206ENST00000573989 NR5A2O00482 541 aa11.71□□□□□ -0.53
TRAPPC1-206ENST00000573989 KRT75O95678 551 aa11.71□□□□□ -0.53
TRAPPC1-206ENST00000573989 AK1P00568 194 aa11.71□□□□□ -0.53
TRAPPC1-206ENST00000573989 ACP2P11117 423 aa11.71□□□□□ -0.53
TRAPPC1-206ENST00000573989 ELAVL4P26378 380 aaKnown RBP11.71□□□□□ -0.53
TRAPPC1-206ENST00000573989 TRPC1P48995 793 aa11.71□□□□□ -0.53
TRAPPC1-206ENST00000573989 PPIAP62937 165 aaKnown RBP11.71□□□□□ -0.53
TRAPPC1-206ENST00000573989 RBPJQ06330 500 aa11.71□□□□□ -0.53
TRAPPC1-206ENST00000573989 IGFBP7Q16270 282 aa11.71□□□□□ -0.53
TRAPPC1-206ENST00000573989 DUSP5Q16690 384 aa11.71□□□□□ -0.53
TRAPPC1-206ENST00000573989 C6orf10Q5SRN2 563 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms