RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 SLC5A8Q8N695 610 aa27.11■■□□□ 1.93
CTDNEP1-208ENST00000573600 FOLH1BQ9HBA9 442 aa27.11■■□□□ 1.93
CTDNEP1-208ENST00000573600 POFUT2Q9Y2G5 429 aa27.11■■□□□ 1.93
CTDNEP1-208ENST00000573600 IGHV5-10-1A0A0J9YXX1 117 aa27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 BCKDKO14874 412 aa27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 CLPTM1O96005 669 aa27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 IFNA16P05015 189 aa27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 GABRA3P34903 492 aa27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 APOFQ13790 326 aa27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 ZNF267Q14586 743 aaPredicted RBP27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 ZNF691Q5VV52 312 aa27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 HMGN2P46Q86SG4 172 aa27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 SETD9Q8NE22 299 aa27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 TSPAN14Q8NG11 270 aa27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 PIK3R3Q92569 461 aa27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 ZG16BQ96DA0 208 aa27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 CNDP2Q96KP4 475 aaKnown RBP27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 PTCHD1Q96NR3 888 aa27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 WFDC6Q9BQY6 131 aa27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 ZNF556Q9HAH1 456 aa27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 RHCGQ9UBD6 479 aa27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 A4GNTQ9UNA3 340 aa27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 HEMK1Q9Y5R4 338 aaPredicted RBP27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 NUP210LQ5VU65 1888 aa27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 TTC36A6NLP5 189 aa27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 SEMA7AO75326 666 aa27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 OXSR1O95747 527 aaPredicted RBP27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 THBS1P07996 1170 aa27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 AVPR2P30518 371 aa27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 EMDP50402 254 aa27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 FUT7Q11130 342 aa27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 PRAMEF17Q5VTA0 474 aa27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 OR6T1Q8NGN1 323 aa27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 ZDHHC19Q8WVZ1 309 aaPredicted RBP27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 LOXL4Q96JB6 756 aa27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 PRRC1Q96M27 445 aa27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 GABARAPL3Q9BY60 117 aa27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 SYNDIG1Q9H7V2 258 aa27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 PAPOLBQ9NRJ5 636 aaKnown RBP27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 ZNF443Q9Y2A4 671 aaPredicted RBP27.1■■□□□ 1.93
CTDNEP1-208ENST00000573600 HYAL3O43820 417 aaPredicted RBP27.09■■□□□ 1.93
CTDNEP1-208ENST00000573600 UGT2B17O75795 530 aa27.09■■□□□ 1.93
CTDNEP1-208ENST00000573600 GUSBP08236 651 aa27.09■■□□□ 1.93
CTDNEP1-208ENST00000573600 RYKP34925 604 aa27.09■■□□□ 1.93
CTDNEP1-208ENST00000573600 LPAL2Q16609 132 aa27.09■■□□□ 1.93
CTDNEP1-208ENST00000573600 DCST1Q5T197 706 aa27.09■■□□□ 1.93
CTDNEP1-208ENST00000573600 AP1ARQ63HQ0 302 aa27.09■■□□□ 1.93
CTDNEP1-208ENST00000573600 ENOPH1Q9UHY7 261 aa27.09■■□□□ 1.93
CTDNEP1-208ENST00000573600 HSPE1-MOB4S4R3N1 261 aa27.09■■□□□ 1.93
CTDNEP1-208ENST00000573600 OR2W5A6NFC9 320 aa27.08■■□□□ 1.93
CTDNEP1-208ENST00000573600 AGAP5A6NIR3 686 aa27.08■■□□□ 1.93
CTDNEP1-208ENST00000573600 DBIP07108 87 aaKnown RBP27.08■■□□□ 1.93
CTDNEP1-208ENST00000573600 TNNI3P19429 210 aa27.08■■□□□ 1.93
CTDNEP1-208ENST00000573600 SSTR4P31391 388 aa27.08■■□□□ 1.93
CTDNEP1-208ENST00000573600 POLR2IP36954 125 aaKnown RBP27.08■■□□□ 1.93
CTDNEP1-208ENST00000573600 NPRL3Q12980 569 aa27.08■■□□□ 1.93
CTDNEP1-208ENST00000573600 EIPR1Q53HC9 387 aa27.08■■□□□ 1.93
CTDNEP1-208ENST00000573600 CCNJQ5T5M9 372 aa27.08■■□□□ 1.93
CTDNEP1-208ENST00000573600 ARHGAP40Q5TG30 622 aa27.08■■□□□ 1.93
CTDNEP1-208ENST00000573600 CCDC74BQ96LY2 380 aa27.08■■□□□ 1.93
CTDNEP1-208ENST00000573600 FNDC11Q9BVV2 318 aa27.08■■□□□ 1.93
CTDNEP1-208ENST00000573600 PCDHGA8Q9Y5G5 932 aa27.08■■□□□ 1.93
CTDNEP1-208ENST00000573600 TRIM64A6NGJ6 449 aa27.07■■□□□ 1.92
CTDNEP1-208ENST00000573600 FAAHO00519 579 aa27.07■■□□□ 1.92
CTDNEP1-208ENST00000573600 KIAA0513O60268 411 aa27.07■■□□□ 1.92
CTDNEP1-208ENST00000573600 IL7RP16871 459 aa27.07■■□□□ 1.92
CTDNEP1-208ENST00000573600 RPS4Y1P22090 263 aaKnown RBP27.07■■□□□ 1.92
CTDNEP1-208ENST00000573600 ELAVL4P26378 380 aaKnown RBP27.07■■□□□ 1.92
CTDNEP1-208ENST00000573600 GPR68Q15743 365 aa27.07■■□□□ 1.92
CTDNEP1-208ENST00000573600 FGD3Q5JSP0 725 aa27.07■■□□□ 1.92
CTDNEP1-208ENST00000573600 RHBDD2Q6NTF9 364 aa27.07■■□□□ 1.92
CTDNEP1-208ENST00000573600 VSTM2LQ96N03 204 aa27.07■■□□□ 1.92
CTDNEP1-208ENST00000573600 CNPPD1Q9BV87 410 aa27.07■■□□□ 1.92
CTDNEP1-208ENST00000573600 SLC7A5P2Q9GIP4 190 aa27.07■■□□□ 1.92
CTDNEP1-208ENST00000573600 MKKSQ9NPJ1 570 aaPredicted RBP27.07■■□□□ 1.92
CTDNEP1-208ENST00000573600 ZNF883P0CG24 379 aa27.07■■□□□ 1.92
CTDNEP1-208ENST00000573600 MPLP40238 635 aa27.07■■□□□ 1.92
CTDNEP1-208ENST00000573600 CLK3P49761 638 aaKnown RBP27.07■■□□□ 1.92
CTDNEP1-208ENST00000573600 PSG6Q00889 435 aa27.07■■□□□ 1.92
CTDNEP1-208ENST00000573600 MFSD4BQ5TF39 518 aa27.07■■□□□ 1.92
CTDNEP1-208ENST00000573600 OR7G1Q8NGA0 311 aa27.07■■□□□ 1.92
CTDNEP1-208ENST00000573600 APOL4Q9BPW4 351 aa27.07■■□□□ 1.92
CTDNEP1-208ENST00000573600 OR10A5Q9H207 317 aa27.07■■□□□ 1.92
CTDNEP1-208ENST00000573600 RLIMQ9NVW2 624 aa27.07■■□□□ 1.92
CTDNEP1-208ENST00000573600 TUBA8Q9NY65 449 aaPredicted RBP27.07■■□□□ 1.92
CTDNEP1-208ENST00000573600 ERVK-19Q9WJR5 959 aa27.07■■□□□ 1.92
CTDNEP1-208ENST00000573600 CHST2Q9Y4C5 530 aa27.07■■□□□ 1.92
CTDNEP1-208ENST00000573600 GMPPBQ9Y5P6 360 aa27.07■■□□□ 1.92
CTDNEP1-208ENST00000573600 IGKV3D-11A0A0A0MRZ8 115 aa27.06■■□□□ 1.92
CTDNEP1-208ENST00000573600 A0A1W2PRQ8 180 aa27.06■■□□□ 1.92
CTDNEP1-208ENST00000573600 DYRK3O43781 588 aa27.06■■□□□ 1.92
CTDNEP1-208ENST00000573600 BRINP1O60477 761 aa27.06■■□□□ 1.92
CTDNEP1-208ENST00000573600 CBLP22681 906 aa27.06■■□□□ 1.92
CTDNEP1-208ENST00000573600 RPL5P46777 297 aaKnown RBP27.06■■□□□ 1.92
CTDNEP1-208ENST00000573600 ISL1P61371 349 aa27.06■■□□□ 1.92
CTDNEP1-208ENST00000573600 TUBA4AP68366 448 aa27.06■■□□□ 1.92
CTDNEP1-208ENST00000573600 PIN1Q13526 163 aaPredicted RBP27.06■■□□□ 1.92
CTDNEP1-208ENST00000573600 DGCR6Q14129 220 aa27.06■■□□□ 1.92
CTDNEP1-208ENST00000573600 LIN52Q52LA3 116 aa27.06■■□□□ 1.92
CTDNEP1-208ENST00000573600 LINC00471Q8N535 108 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms