RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 CHST10O43529 356 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 CD8BP10966 210 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 TRIM23P36406 574 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 SLC9A5Q14940 896 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 TCEAL5Q5H9L2 206 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 AADACL4Q5VUY2 407 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 METRNLQ641Q3 311 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 TMEM64Q6YI46 380 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 SLC39A5Q6ZMH5 540 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 VRK2Q86Y07 508 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 TMIEQ8NEW7 156 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 CHFRQ96EP1 664 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 NECTIN4Q96NY8 510 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 AICDAQ9GZX7 198 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 BTBD1Q9H0C5 482 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 KLHL31Q9H511 634 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 LIPT1Q9Y234 373 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 LOC102723532A0A0G2JNH3 316 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 TNFRSF10AO00220 468 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 ZNF780AO75290 641 aaPredicted RBP14.67□□□□□ -0.06
NUP88-207ENST00000573584 CLEC3AO75596 197 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 FGF19O95750 216 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 C8orf89P0DMQ9 161 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 PTBP1P26599 531 aaKnown RBP eCLIP14.67□□□□□ -0.06
NUP88-207ENST00000573584 HTR2BP41595 481 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 OMPP47874 163 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 CLDN20P56880 219 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 ST3GAL3Q11203 375 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 SF3A2Q15428 464 aaKnown RBP14.67□□□□□ -0.06
NUP88-207ENST00000573584 PIP5KL1Q5T9C9 394 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 TMEM107Q6UX40 140 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 LRRTM4Q86VH4 590 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 LINC01555Q8NAE3 123 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 OR4Q3Q8NH05 313 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 PIGXQ8TBF5 258 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 SPRYD4Q8WW59 207 aaPredicted RBP14.67□□□□□ -0.06
NUP88-207ENST00000573584 OTULINQ96BN8 352 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 GFM1Q96RP9 751 aaKnown RBP14.67□□□□□ -0.06
NUP88-207ENST00000573584 SECISBP2Q96T21 854 aaKnown RBP14.67□□□□□ -0.06
NUP88-207ENST00000573584 KCNJ15Q99712 375 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 MARVELD1Q9BSK0 173 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 TEX12Q9BXU0 123 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 NIPAL2Q9H841 368 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 IRAK3Q9Y616 596 aa14.67□□□□□ -0.06
NUP88-207ENST00000573584 NUP210Q8TEM1 1887 aaPredicted RBP14.67□□□□□ -0.06
NUP88-207ENST00000573584 LRRK1Q38SD2 2015 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 HIDE1A8MVS5 230 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 ISM1B1AKI9 464 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 PRRT4C9JH25 899 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 SURF4O15260 269 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 ORC5O43913 435 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 C1QBP02746 253 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 CHRNB1P11230 501 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 ADH5P11766 374 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 GPLD1P80108 840 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 ABATP80404 500 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 CCDC85BQ15834 202 aaPredicted RBP14.66□□□□□ -0.06
NUP88-207ENST00000573584 ZNF57Q68EA5 555 aaPredicted RBP14.66□□□□□ -0.06
NUP88-207ENST00000573584 PLCZ1Q86YW0 608 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 DEDD2Q8WXF8 326 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 OSTF1Q92882 214 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 HHIPL1Q96JK4 782 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 IRF2BPLQ9H1B7 796 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 EQTNQ9NQ60 294 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 PCDH10Q9P2E7 1040 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 IL20RAQ9UHF4 553 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 ERVH48-1M5A8F1 160 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 IFNA8P32881 189 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 TRHRP34981 398 aaPredicted RBP14.66□□□□□ -0.06
NUP88-207ENST00000573584 CLCNKAP51800 687 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 DUSP2Q05923 314 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 TGM3Q08188 693 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 ZNF697Q5TEC3 545 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 ERN2Q76MJ5 926 aaKnown RBP14.66□□□□□ -0.06
NUP88-207ENST00000573584 BBS1Q8NFJ9 593 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 OR8K5Q8NH50 307 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 CXorf40AQ8TE69 158 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 WFIKKN2Q8TEU8 576 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 DNAJA4Q8WW22 397 aaPredicted RBP14.66□□□□□ -0.06
NUP88-207ENST00000573584 ING5Q8WYH8 240 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 DIO2Q92813 273 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 CNRIP1Q96F85 164 aaPredicted RBP14.66□□□□□ -0.06
NUP88-207ENST00000573584 COX14Q96I36 57 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 ZNF649Q9BS31 505 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 WACQ9BTA9 647 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 TRMT61BQ9BVS5 477 aaKnown RBP14.66□□□□□ -0.06
NUP88-207ENST00000573584 LGR4Q9BXB1 951 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 RNF32Q9H0A6 362 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 MCUBQ9NWR8 336 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 ADAM30Q9UKF2 790 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 POLHQ9Y253 713 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 ATG4BQ9Y4P1 393 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 TCF20Q9UGU0 1960 aaKnown RBP14.66□□□□□ -0.06
NUP88-207ENST00000573584 COL4A3Q01955 1670 aa14.66□□□□□ -0.06
NUP88-207ENST00000573584 A0A1W2PR48 441 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 SYT5O00445 386 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 SLC9A3R1O14745 358 aaPredicted RBP14.65□□□□□ -0.06
NUP88-207ENST00000573584 SLC43A1O75387 559 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 GNRH1P01148 92 aa14.65□□□□□ -0.06
NUP88-207ENST00000573584 GAAP10253 952 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms