RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 H3BML4 177 aa17.85■□□□□ 0.45
CCDC40-206ENST00000572083 HS3ST1O14792 307 aa17.85■□□□□ 0.45
CCDC40-206ENST00000572083 SCO2O43819 266 aa17.85■□□□□ 0.45
CCDC40-206ENST00000572083 TSPAN2O60636 221 aa17.85■□□□□ 0.45
CCDC40-206ENST00000572083 CT45A8P0DMV1 189 aa17.85■□□□□ 0.45
CCDC40-206ENST00000572083 CT45A9P0DMV2 189 aa17.85■□□□□ 0.45
CCDC40-206ENST00000572083 TCP1P17987 556 aaKnown RBP17.85■□□□□ 0.45
CCDC40-206ENST00000572083 HK1P19367 917 aa17.85■□□□□ 0.45
CCDC40-206ENST00000572083 KRT20P35900 424 aa17.85■□□□□ 0.45
CCDC40-206ENST00000572083 ALDH9A1P49189 494 aa17.85■□□□□ 0.45
CCDC40-206ENST00000572083 CLDN20P56880 219 aa17.85■□□□□ 0.45
CCDC40-206ENST00000572083 GUSBP1Q15486 140 aa17.85■□□□□ 0.45
CCDC40-206ENST00000572083 CT45A2Q5DJT8 189 aa17.85■□□□□ 0.45
CCDC40-206ENST00000572083 TTC19Q6DKK2 380 aaPredicted RBP17.85■□□□□ 0.45
CCDC40-206ENST00000572083 PODNL1Q6PEZ8 512 aa17.85■□□□□ 0.45
CCDC40-206ENST00000572083 NPSR1Q6W5P4 371 aa17.85■□□□□ 0.45
CCDC40-206ENST00000572083 SH2D5Q6ZV89 423 aa17.85■□□□□ 0.45
CCDC40-206ENST00000572083 LARP4Q71RC2 724 aaKnown RBP eCLIP17.85■□□□□ 0.45
CCDC40-206ENST00000572083 METTL4Q8N3J2 472 aa17.85■□□□□ 0.45
CCDC40-206ENST00000572083 ATP6V1E2Q96A05 226 aa17.85■□□□□ 0.45
CCDC40-206ENST00000572083 EFHD2Q96C19 240 aaPredicted RBP17.85■□□□□ 0.45
CCDC40-206ENST00000572083 CNRIP1Q96F85 164 aaPredicted RBP17.85■□□□□ 0.45
CCDC40-206ENST00000572083 PLPPR2Q96GM1 343 aa17.85■□□□□ 0.45
CCDC40-206ENST00000572083 BTBD9Q96Q07 612 aa17.85■□□□□ 0.45
CCDC40-206ENST00000572083 LRRC1Q9BTT6 524 aa17.85■□□□□ 0.45
CCDC40-206ENST00000572083 DSN1Q9H410 356 aa17.85■□□□□ 0.45
CCDC40-206ENST00000572083 AHSPQ9NZD4 102 aa17.85■□□□□ 0.45
CCDC40-206ENST00000572083 PPP4R1LQ9P1A2 415 aa17.85■□□□□ 0.45
CCDC40-206ENST00000572083 LAMP3Q9UQV4 416 aa17.85■□□□□ 0.45
CCDC40-206ENST00000572083 ACOT9Q9Y305 439 aa17.85■□□□□ 0.45
CCDC40-206ENST00000572083 ZNF337Q9Y3M9 751 aa17.85■□□□□ 0.45
CCDC40-206ENST00000572083 ZNF175Q9Y473 711 aa17.85■□□□□ 0.45
CCDC40-206ENST00000572083 CR1P17927 2039 aa17.84■□□□□ 0.45
CCDC40-206ENST00000572083 TNFRSF21O75509 655 aa17.84■□□□□ 0.45
CCDC40-206ENST00000572083 TP53P04637 393 aaPredicted RBP17.84■□□□□ 0.45
CCDC40-206ENST00000572083 CCNG1P51959 295 aa17.84■□□□□ 0.45
CCDC40-206ENST00000572083 EEFSECP57772 596 aaKnown RBP17.84■□□□□ 0.45
CCDC40-206ENST00000572083 EFR3AQ14156 821 aa17.84■□□□□ 0.45
CCDC40-206ENST00000572083 FGFBP1Q14512 234 aa17.84■□□□□ 0.45
CCDC40-206ENST00000572083 FAM83EQ2M2I3 478 aa17.84■□□□□ 0.45
CCDC40-206ENST00000572083 SGO1Q5FBB7 561 aa17.84■□□□□ 0.45
CCDC40-206ENST00000572083 PPP4R4Q6NUP7 873 aa17.84■□□□□ 0.45
CCDC40-206ENST00000572083 FAM214BQ7L5A3 538 aa17.84■□□□□ 0.45
CCDC40-206ENST00000572083 ZNF611Q8N823 705 aa17.84■□□□□ 0.45
CCDC40-206ENST00000572083 RNF138Q8WVD3 245 aa17.84■□□□□ 0.45
CCDC40-206ENST00000572083 DPH5Q9H2P9 285 aa17.84■□□□□ 0.45
CCDC40-206ENST00000572083 PFDN4Q9NQP4 134 aa17.84■□□□□ 0.45
CCDC40-206ENST00000572083 UQCRHLA0A096LP55 91 aa17.83■□□□□ 0.44
CCDC40-206ENST00000572083 GUCY1B2O75343 617 aa17.83■□□□□ 0.44
CCDC40-206ENST00000572083 AQP8O94778 261 aa17.83■□□□□ 0.44
CCDC40-206ENST00000572083 IFNA2P01563 188 aa17.83■□□□□ 0.44
CCDC40-206ENST00000572083 STX5Q13190 355 aa17.83■□□□□ 0.44
CCDC40-206ENST00000572083 ZNF628Q5EBL2 1059 aa17.83■□□□□ 0.44
CCDC40-206ENST00000572083 FAM219BQ5XKK7 198 aa17.83■□□□□ 0.44
CCDC40-206ENST00000572083 CYS1Q717R9 158 aa17.83■□□□□ 0.44
CCDC40-206ENST00000572083 WFDC8Q8IUA0 241 aa17.83■□□□□ 0.44
CCDC40-206ENST00000572083 FADS6Q8N9I5 356 aa17.83■□□□□ 0.44
CCDC40-206ENST00000572083 OR2M3Q8NG83 312 aa17.83■□□□□ 0.44
CCDC40-206ENST00000572083 TRPC4APQ8TEL6 797 aa17.83■□□□□ 0.44
CCDC40-206ENST00000572083 AKAP1Q92667 903 aaKnown RBP eCLIP17.83■□□□□ 0.44
CCDC40-206ENST00000572083 TM4SF18Q96CE8 201 aa17.83■□□□□ 0.44
CCDC40-206ENST00000572083 ZNF681Q96N22 645 aa17.83■□□□□ 0.44
CCDC40-206ENST00000572083 REG4Q9BYZ8 158 aa17.83■□□□□ 0.44
CCDC40-206ENST00000572083 SLC12A4Q9UP95 1085 aa17.83■□□□□ 0.44
CCDC40-206ENST00000572083 TNPO3Q9Y5L0 923 aaKnown RBP17.83■□□□□ 0.44
CCDC40-206ENST00000572083 ZNF780BQ9Y6R6 833 aa17.83■□□□□ 0.44
CCDC40-206ENST00000572083 TMCC2O75069 709 aa17.82■□□□□ 0.44
CCDC40-206ENST00000572083 EVI2BP34910 448 aa17.82■□□□□ 0.44
CCDC40-206ENST00000572083 RPS4XP62701 263 aaKnown RBP17.82■□□□□ 0.44
CCDC40-206ENST00000572083 GALNT1Q10472 559 aaPredicted RBP17.82■□□□□ 0.44
CCDC40-206ENST00000572083 IFT88Q13099 833 aa17.82■□□□□ 0.44
CCDC40-206ENST00000572083 STAC2Q6ZMT1 411 aa17.82■□□□□ 0.44
CCDC40-206ENST00000572083 CREG2Q8IUH2 290 aa17.82■□□□□ 0.44
CCDC40-206ENST00000572083 OR4N2Q8NGD1 307 aa17.82■□□□□ 0.44
CCDC40-206ENST00000572083 TMEM158Q8WZ71 300 aa17.82■□□□□ 0.44
CCDC40-206ENST00000572083 KAT2AQ92830 837 aa17.82■□□□□ 0.44
CCDC40-206ENST00000572083 VSTM2LQ96N03 204 aa17.82■□□□□ 0.44
CCDC40-206ENST00000572083 NSUN5Q96P11 429 aaKnown RBP17.82■□□□□ 0.44
CCDC40-206ENST00000572083 TMEM204Q9BSN7 226 aa17.82■□□□□ 0.44
CCDC40-206ENST00000572083 YAE1D1Q9NRH1 226 aa17.82■□□□□ 0.44
CCDC40-206ENST00000572083 FARSBQ9NSD9 589 aaKnown RBP17.82■□□□□ 0.44
CCDC40-206ENST00000572083 MED11Q9P086 117 aa17.82■□□□□ 0.44
CCDC40-206ENST00000572083 PSME2Q9UL46 239 aa17.82■□□□□ 0.44
CCDC40-206ENST00000572083 CLEC4AQ9UMR7 237 aa17.82■□□□□ 0.44
CCDC40-206ENST00000572083 ABCA1O95477 2261 aa17.81■□□□□ 0.44
CCDC40-206ENST00000572083 OR2M5A3KFT3 312 aa17.81■□□□□ 0.44
CCDC40-206ENST00000572083 EIF3HO15372 352 aaKnown RBP eCLIP17.81■□□□□ 0.44
CCDC40-206ENST00000572083 C2P06681 752 aa17.81■□□□□ 0.44
CCDC40-206ENST00000572083 C8BP07358 591 aa17.81■□□□□ 0.44
CCDC40-206ENST00000572083 PPP3CBP16298 524 aa17.81■□□□□ 0.44
CCDC40-206ENST00000572083 PNLIPRP2P54317 469 aa17.81■□□□□ 0.44
CCDC40-206ENST00000572083 TRAF3Q13114 568 aa17.81■□□□□ 0.44
CCDC40-206ENST00000572083 ACAP2Q15057 778 aa17.81■□□□□ 0.44
CCDC40-206ENST00000572083 ALKBH2Q6NS38 261 aa17.81■□□□□ 0.44
CCDC40-206ENST00000572083 HIPK1Q86Z02 1210 aa17.81■□□□□ 0.44
CCDC40-206ENST00000572083 SLC44A2Q8IWA5 706 aaPredicted RBP17.81■□□□□ 0.44
CCDC40-206ENST00000572083 CCDC116Q8IYX3 515 aa17.81■□□□□ 0.44
CCDC40-206ENST00000572083 PTGR2Q8N8N7 351 aaPredicted RBP17.81■□□□□ 0.44
CCDC40-206ENST00000572083 OR9A2Q8NGT5 310 aa17.81■□□□□ 0.44
CCDC40-206ENST00000572083 ZNF675Q8TD23 568 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms