RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 ZBED6CLQ96FA7 236 aaPredicted RBP13.31□□□□□ -0.28
LITAF-208ENST00000571627 COL21A1Q96P44 957 aa13.31□□□□□ -0.28
LITAF-208ENST00000571627 ADOQ96SZ5 270 aa13.31□□□□□ -0.28
LITAF-208ENST00000571627 PRPF18Q99633 342 aaKnown RBP13.31□□□□□ -0.28
LITAF-208ENST00000571627 C1orf50Q9BV19 199 aa13.31□□□□□ -0.28
LITAF-208ENST00000571627 OSBPL11Q9BXB4 747 aa13.31□□□□□ -0.28
LITAF-208ENST00000571627 AKTIPQ9H8T0 292 aa13.31□□□□□ -0.28
LITAF-208ENST00000571627 DDX18Q9NVP1 670 aaKnown RBP13.31□□□□□ -0.28
LITAF-208ENST00000571627 PNPOQ9NVS9 261 aa13.31□□□□□ -0.28
LITAF-208ENST00000571627 ASIC5Q9NY37 505 aa13.31□□□□□ -0.28
LITAF-208ENST00000571627 TAS2R9Q9NYW1 312 aa13.31□□□□□ -0.28
LITAF-208ENST00000571627 NOP53Q9NZM5 478 aaKnown RBP13.31□□□□□ -0.28
LITAF-208ENST00000571627 KLRF1Q9NZS2 232 aa13.31□□□□□ -0.28
LITAF-208ENST00000571627 SH3BP4Q9P0V3 963 aa13.31□□□□□ -0.28
LITAF-208ENST00000571627 ACAD8Q9UKU7 415 aa13.31□□□□□ -0.28
LITAF-208ENST00000571627 C19orf53Q9UNZ5 99 aaPredicted RBP13.31□□□□□ -0.28
LITAF-208ENST00000571627 MAPRE3Q9UPY8 281 aa13.31□□□□□ -0.28
LITAF-208ENST00000571627 C15orf41Q9Y2V0 281 aa13.31□□□□□ -0.28
LITAF-208ENST00000571627 OR14I1A6ND48 311 aa13.3□□□□□ -0.28
LITAF-208ENST00000571627 PRAMEF25A6NGN4 478 aa13.3□□□□□ -0.28
LITAF-208ENST00000571627 TRPC5OSA6NMA1 111 aa13.3□□□□□ -0.28
LITAF-208ENST00000571627 PLOD2O00469 737 aa13.3□□□□□ -0.28
LITAF-208ENST00000571627 BCKDKO14874 412 aa13.3□□□□□ -0.28
LITAF-208ENST00000571627 HCN1O60741 890 aa13.3□□□□□ -0.28
LITAF-208ENST00000571627 ICOSLGO75144 302 aa13.3□□□□□ -0.28
LITAF-208ENST00000571627 COQ9O75208 318 aa13.3□□□□□ -0.28
LITAF-208ENST00000571627 TRAPPC6AO75865 159 aa13.3□□□□□ -0.28
LITAF-208ENST00000571627 HTR1EP28566 365 aa13.3□□□□□ -0.28
LITAF-208ENST00000571627 PSPHP78330 225 aa13.3□□□□□ -0.28
LITAF-208ENST00000571627 PSG6Q00889 435 aa13.3□□□□□ -0.28
LITAF-208ENST00000571627 SP5Q6BEB4 398 aaPredicted RBP13.3□□□□□ -0.28
LITAF-208ENST00000571627 ANGPTL8Q6UXH0 198 aa13.3□□□□□ -0.28
LITAF-208ENST00000571627 EID3Q8N140 333 aa13.3□□□□□ -0.28
LITAF-208ENST00000571627 OR2L13Q8N349 312 aa13.3□□□□□ -0.28
LITAF-208ENST00000571627 NEIL3Q8TAT5 605 aa13.3□□□□□ -0.28
LITAF-208ENST00000571627 ZNF75CPQ92670 426 aaPredicted RBP13.3□□□□□ -0.28
LITAF-208ENST00000571627 EFHD2Q96C19 240 aaPredicted RBP13.3□□□□□ -0.28
LITAF-208ENST00000571627 NTNG2Q96CW9 530 aa13.3□□□□□ -0.28
LITAF-208ENST00000571627 ELP4Q96EB1 424 aa13.3□□□□□ -0.28
LITAF-208ENST00000571627 TMEM41AQ96HV5 264 aa13.3□□□□□ -0.28
LITAF-208ENST00000571627 NUF2Q9BZD4 464 aa13.3□□□□□ -0.28
LITAF-208ENST00000571627 UBQLN3Q9H347 655 aa13.3□□□□□ -0.28
LITAF-208ENST00000571627 MEAF6Q9HAF1 191 aa13.3□□□□□ -0.28
LITAF-208ENST00000571627 ACSS1Q9NUB1 689 aaPredicted RBP13.3□□□□□ -0.28
LITAF-208ENST00000571627 QPCTLQ9NXS2 382 aa13.3□□□□□ -0.28
LITAF-208ENST00000571627 ATP6V1HQ9UI12 483 aa13.3□□□□□ -0.28
LITAF-208ENST00000571627 OR10H1Q9Y4A9 318 aa13.3□□□□□ -0.28
LITAF-208ENST00000571627 KLF2Q9Y5W3 355 aaPredicted RBP13.3□□□□□ -0.28
LITAF-208ENST00000571627 ABCA12Q86UK0 2595 aa13.3□□□□□ -0.28
LITAF-208ENST00000571627 PKDREJQ9NTG1 2253 aa13.3□□□□□ -0.28
LITAF-208ENST00000571627 ADGRG4Q8IZF6 3080 aa13.3□□□□□ -0.28
LITAF-208ENST00000571627 LRBAP50851 2863 aa13.3□□□□□ -0.28
LITAF-208ENST00000571627 NUP214P35658 2090 aaPredicted RBP13.29□□□□□ -0.28
LITAF-208ENST00000571627 DCHS2Q6V1P9 2916 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 OR6C70A6NIJ9 312 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 SCAMP2O15127 329 aaKnown RBP13.29□□□□□ -0.28
LITAF-208ENST00000571627 HDAC3O15379 428 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 TSPAN2O60636 221 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 PSMG1O95456 288 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 LBPP18428 481 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 AGAP20933 346 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 PRPS1L1P21108 318 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 ACVR2AP27037 513 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 IL12BP29460 328 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 GPC1P35052 558 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 KRT20P35900 424 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 FRKP42685 505 aaPredicted RBP13.29□□□□□ -0.28
LITAF-208ENST00000571627 CDK9P50750 372 aaKnown RBP13.29□□□□□ -0.28
LITAF-208ENST00000571627 MANFP55145 182 aaKnown RBP13.29□□□□□ -0.28
LITAF-208ENST00000571627 NUP107P57740 925 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 PPP2R2AP63151 447 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 OCRLQ01968 901 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 PMPCAQ10713 525 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 PTGR1Q14914 329 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 TOMM20Q15388 145 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 WLSQ5T9L3 541 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 TIGD3Q6B0B8 471 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 RTL6Q6ICC9 239 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 LARP4Q71RC2 724 aaKnown RBP eCLIP13.29□□□□□ -0.282e-12■■■□□ 15.7
LITAF-208ENST00000571627 OR1J4Q8NGS1 313 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 NUDT8Q8WV74 236 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 SARAFQ96BY9 339 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 SLC35A4Q96G79 324 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 PPP1R36Q96LQ0 422 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 ACKR4Q9NPB9 350 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 EQTNQ9NQ60 294 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 ATAD3AQ9NVI7 634 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 ALKBH4Q9NXW9 302 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 SLC6A5Q9Y345 797 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 FAM215AQ9Y5M1 114 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 KIAA1549Q9HCM3 1950 aa13.29□□□□□ -0.28
LITAF-208ENST00000571627 C15orf38-AP3S2A0A0A6YYH1 394 aa13.28□□□□□ -0.28
LITAF-208ENST00000571627 FIGNL2A6NMB9 653 aa13.28□□□□□ -0.28
LITAF-208ENST00000571627 C17orf51A8MQB3 221 aa13.28□□□□□ -0.28
LITAF-208ENST00000571627 C19orf84I3L1E1 186 aa13.28□□□□□ -0.28
LITAF-208ENST00000571627 SNPHO15079 494 aa13.28□□□□□ -0.28
LITAF-208ENST00000571627 SASH3O75995 380 aa13.28□□□□□ -0.28
LITAF-208ENST00000571627 CLDN14O95500 239 aa13.28□□□□□ -0.28
LITAF-208ENST00000571627 SNRPB2P08579 225 aaKnown RBP13.28□□□□□ -0.28
LITAF-208ENST00000571627 G6PDP11413 515 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms