RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 CXCL13O43927 109 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 FADS1O60427 444 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 REM1O75628 298 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 LYZL6O75951 148 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 ADAP00813 363 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 KRT14P02533 472 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 PEPDP12955 493 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 SLC25A16P16260 332 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 PPP3CBP16298 524 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 ZNF10P21506 573 aaPredicted RBP6.36□□□□□ -1.39
SMG6-205ENST00000570659 NT5EP21589 574 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 PSMA4P25789 261 aaKnown RBP6.36□□□□□ -1.39
SMG6-205ENST00000570659 CXCR5P32302 372 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 TTKP33981 857 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 GALNSP34059 522 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 FEN1P39748 380 aaKnown RBP6.36□□□□□ -1.39
SMG6-205ENST00000570659 NR4A2P43354 598 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 EIF1AXP47813 144 aaKnown RBP6.36□□□□□ -1.39
SMG6-205ENST00000570659 XKP51811 444 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 GPX6P59796 221 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 CDK16Q00536 496 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 MAP4K2Q12851 820 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 PDK4Q16654 411 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 GLIPR1L2Q4G1C9 344 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 SFRP5Q5T4F7 317 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 LGSNQ5TDP6 509 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 HLA-DQA1Q5Y7H0 255 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 AAGABQ6PD74 315 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 CLEC2AQ6UVW9 174 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 C1orf229Q6ZS94 237 aaPredicted RBP6.36□□□□□ -1.39
SMG6-205ENST00000570659 GSTA5Q7RTV2 222 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 MILR1Q7Z6M3 343 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 ZC3HC1Q86WB0 502 aaKnown RBP6.36□□□□□ -1.39
SMG6-205ENST00000570659 RFLNBQ8N5W9 214 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 CEP112Q8N8E3 955 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 ANKS4BQ8N8V4 417 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 MCUQ8NE86 351 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 C17orf47Q8NEP4 570 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 OR10D3Q8NH80 312 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 POC1BQ8TC44 478 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 EXT2Q93063 718 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 CERS2Q96G23 380 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 SLC35A4Q96G79 324 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 COL21A1Q96P44 957 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 SORCS2Q96PQ0 1159 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 SRXN1Q9BYN0 137 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 TRIM54Q9BYV2 358 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 GRIP2Q9C0E4 1043 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 DDX31Q9H8H2 851 aaKnown RBP6.36□□□□□ -1.39
SMG6-205ENST00000570659 ESM1Q9NQ30 184 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.36□□□□□ -1.39
SMG6-205ENST00000570659 GPRC5BQ9NZH0 403 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 PTBP2Q9UKA9 531 aaKnown RBP6.36□□□□□ -1.39
SMG6-205ENST00000570659 GPR52Q9Y2T5 361 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 GPR55Q9Y2T6 319 aaPredicted RBP6.36□□□□□ -1.39
SMG6-205ENST00000570659 MRPS18CQ9Y3D5 142 aaKnown RBP6.36□□□□□ -1.39
SMG6-205ENST00000570659 PCDHGB1Q9Y5G3 927 aa6.36□□□□□ -1.39
SMG6-205ENST00000570659 FAM95CA0A1B0GW59 222 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 CAPN14A8MX76 684 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 C9JVG2 144 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 EIF1AYO14602 144 aaKnown RBP6.35□□□□□ -1.39
SMG6-205ENST00000570659 TNFSF11O14788 317 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 TO15178 435 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 CCNT2O60583 730 aaKnown RBP6.35□□□□□ -1.39
SMG6-205ENST00000570659 IGKV1D-16P01601 117 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 FGGP02679 453 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 IGFBP1P08833 259 aaPredicted RBP6.35□□□□□ -1.39
SMG6-205ENST00000570659 MLNP12872 115 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 NAGAP17050 411 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 PGAM1P18669 254 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 GSTM2P28161 218 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 TMED10P49755 219 aaKnown RBP6.35□□□□□ -1.39
SMG6-205ENST00000570659 NRG3P56975 720 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 TPM4P67936 248 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 EEF1A1P68104 462 aaKnown RBP6.35□□□□□ -1.39
SMG6-205ENST00000570659 SARNPP82979 210 aaKnown RBP6.35□□□□□ -1.39
SMG6-205ENST00000570659 SLC25A3Q00325 362 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 IRF8Q02556 426 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 SNTA1Q13424 505 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 RCN2Q14257 317 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 GANABQ14697 944 aaKnown RBP6.35□□□□□ -1.39
SMG6-205ENST00000570659 TRIP10Q15642 601 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 TMEM35AQ53FP2 167 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 AWAT1Q58HT5 328 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 SEL1L2Q5TEA6 688 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 EEF1A1P5Q5VTE0 462 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 LIPNQ5VXI9 398 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 RINLQ6ZS11 566 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 MARCH3Q86UD3 253 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 TUSC5Q8IXB3 177 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 PLD6Q8N2A8 252 aaKnown RBP6.35□□□□□ -1.39
SMG6-205ENST00000570659 C3orf56Q8N813 242 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 PPM1NQ8N819 430 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 SGMS2Q8NHU3 365 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 KAT2AQ92830 837 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 ZNF775Q96BV0 537 aaPredicted RBP6.35□□□□□ -1.39
SMG6-205ENST00000570659 C1GALT1C1Q96EU7 318 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 CNRIP1Q96F85 164 aaPredicted RBP6.35□□□□□ -1.39
SMG6-205ENST00000570659 CFAP36Q96G28 342 aa6.35□□□□□ -1.39
SMG6-205ENST00000570659 GMPPAQ96IJ6 420 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms