RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 C15orf62A8K5M9 175 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 ZNF814B7Z6K7 855 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 B8ZZF3 427 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 C1QTNF3-AMACRE9PGA6 284 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 F5H5T6 163 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 M0QYV0 167 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 CASQ2O14958 399 aaPredicted RBP2.93□□□□□ -1.94
CNOT1-221ENST00000569924 CETN3O15182 167 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 SCO2O43819 266 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 GPRIN2O60269 458 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 NME2P1O60361 137 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 SDC3O75056 442 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 MTX2O75431 263 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 VPS26AO75436 327 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 WISP2O76076 250 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 BMP10O95393 424 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 IL1BP01584 269 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 IGLV3-25P01717 112 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 APOEP02649 317 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 GIMD1P0DJR0 217 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 CALCBP10092 127 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 SLC2A3P11169 496 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 FBLP22087 321 aaKnown RBP2.93□□□□□ -1.94
CNOT1-221ENST00000569924 DGKAP23743 735 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 ITGA3P26006 1051 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 CFPP27918 469 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 PRDX6P30041 224 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 RPL3P39023 403 aaKnown RBP2.93□□□□□ -1.94
CNOT1-221ENST00000569924 SYKP43405 635 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 MMP13P45452 471 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 ACADSBP45954 432 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 NUMBP49757 651 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 DUSP3P51452 185 aaPredicted RBP2.93□□□□□ -1.94
CNOT1-221ENST00000569924 ZP1P60852 638 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 FKBP3Q00688 224 aaKnown RBP2.93□□□□□ -1.94
CNOT1-221ENST00000569924 PDE1BQ01064 536 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 GBE1Q04446 702 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 RASGEF1BQ0VAM2 473 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 CNTN1Q12860 1018 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 EIF4EBP2Q13542 120 aaPredicted RBP2.93□□□□□ -1.94
CNOT1-221ENST00000569924 SNX1Q13596 522 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 CARTPTQ16568 116 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 UGT3A2Q3SY77 523 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 AMZ1Q400G9 498 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 TMEM41BQ5BJD5 291 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 RABGAP1LQ5R372 815 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 LDLRAP1Q5SW96 308 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 PAPD7Q5XG87 772 aaKnown RBP2.93□□□□□ -1.94
CNOT1-221ENST00000569924 KDM7AQ6ZMT4 941 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 ZNF793Q6ZN11 406 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 TMEM26Q6ZUK4 368 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 TTLL10Q6ZVT0 673 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 CUZD1Q86UP6 607 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 TAC4Q86UU9 113 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 HORMAD1Q86X24 394 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 VRK3Q8IV63 474 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 CDH26Q8IXH8 852 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 ZNF679Q8IYX0 411 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 LGI2Q8N0V4 545 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 BCORP1Q8N888 145 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 ATP6V0D2Q8N8Y2 350 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 FADS6Q8N9I5 356 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 EIF1ADQ8N9N8 165 aaKnown RBP2.93□□□□□ -1.94
CNOT1-221ENST00000569924 NPEPL1Q8NDH3 523 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 STEAP2Q8NFT2 490 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 OR4K1Q8NGD4 311 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 OR4A16Q8NH70 328 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 CCDC107Q8WV48 283 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 OR8D1Q8WZ84 308 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 SLC35C1Q96A29 364 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 MED8Q96G25 268 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 BTN2A3PQ96KV6 586 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 TTC25Q96NG3 672 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 TAAR6Q96RI8 345 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 CCT7Q99832 543 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 PRMT1Q99873 361 aaKnown RBP2.93□□□□□ -1.94
CNOT1-221ENST00000569924 SLC39A8Q9C0K1 460 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 ACTL8Q9H568 366 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 CLMPQ9H6B4 373 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 C10orf88Q9H8K7 445 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 ROPN1Q9HAT0 212 aaPredicted RBP2.93□□□□□ -1.94
CNOT1-221ENST00000569924 PCDH9Q9HC56 1237 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 ASCL3Q9NQ33 180 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 NLGN3Q9NZ94 848 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 MSRB1Q9NZV6 116 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 KLHL9Q9P2J3 617 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 ATXN10Q9UBB4 475 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 IL36RNQ9UBH0 155 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 MALT1Q9UDY8 824 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 IL20RAQ9UHF4 553 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 CAB39Q9Y376 341 aaPredicted RBP2.93□□□□□ -1.94
CNOT1-221ENST00000569924 TMED5Q9Y3A6 229 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 TMED3Q9Y3Q3 217 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 SPIN1Q9Y657 262 aaPredicted RBP2.93□□□□□ -1.94
CNOT1-221ENST00000569924 HS3ST3A1Q9Y663 406 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 CSNK1G3Q9Y6M4 447 aa2.93□□□□□ -1.94
CNOT1-221ENST00000569924 SETD2Q9BYW2 2564 aaPredicted RBP2.93□□□□□ -1.94
CNOT1-221ENST00000569924 FLNCQ14315 2725 aa2.92□□□□□ -1.94
CNOT1-221ENST00000569924 TRAV18A0A075B6X5 111 aa2.92□□□□□ -1.94
CNOT1-221ENST00000569924 C15orf38-AP3S2A0A0A6YYH1 394 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms