RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 PRPS2P11908 318 aa11.9□□□□□ -0.5
CNOT1-220ENST00000569916 EFNA1P20827 205 aaPredicted RBP11.9□□□□□ -0.5
CNOT1-220ENST00000569916 GPC1P35052 558 aa11.9□□□□□ -0.5
CNOT1-220ENST00000569916 KRT20P35900 424 aa11.9□□□□□ -0.5
CNOT1-220ENST00000569916 RPL3P39023 403 aaKnown RBP11.9□□□□□ -0.5
CNOT1-220ENST00000569916 PNLIPRP2P54317 469 aa11.9□□□□□ -0.5
CNOT1-220ENST00000569916 WDR4P57081 412 aaKnown RBP11.9□□□□□ -0.5
CNOT1-220ENST00000569916 EFR3AQ14156 821 aa11.9□□□□□ -0.5
CNOT1-220ENST00000569916 IL23RQ5VWK5 629 aa11.9□□□□□ -0.5
CNOT1-220ENST00000569916 ZNF585AQ6P3V2 769 aa11.9□□□□□ -0.5
CNOT1-220ENST00000569916 LARP4Q71RC2 724 aaKnown RBP eCLIP11.9□□□□□ -0.5
CNOT1-220ENST00000569916 R3HCC1LQ7Z5L2 792 aaKnown RBP11.9□□□□□ -0.5
CNOT1-220ENST00000569916 WDSUB1Q8N9V3 476 aa11.9□□□□□ -0.5
CNOT1-220ENST00000569916 OR7A2PQ8NGA2 310 aa11.9□□□□□ -0.5
CNOT1-220ENST00000569916 OR1J4Q8NGS1 313 aa11.9□□□□□ -0.5
CNOT1-220ENST00000569916 HOXB13Q92826 284 aaPredicted RBP11.9□□□□□ -0.5
CNOT1-220ENST00000569916 EFHD2Q96C19 240 aaPredicted RBP11.9□□□□□ -0.5
CNOT1-220ENST00000569916 TLCD1Q96CP7 247 aa11.9□□□□□ -0.5
CNOT1-220ENST00000569916 TMBIM4Q9HC24 238 aa11.9□□□□□ -0.5
CNOT1-220ENST00000569916 NTMQ9P121 344 aa11.9□□□□□ -0.5
CNOT1-220ENST00000569916 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.9□□□□□ -0.5
CNOT1-220ENST00000569916 OR10H1Q9Y4A9 318 aa11.9□□□□□ -0.5
CNOT1-220ENST00000569916 FAM215AQ9Y5M1 114 aa11.9□□□□□ -0.5
CNOT1-220ENST00000569916 WIF1Q9Y5W5 379 aa11.9□□□□□ -0.5
CNOT1-220ENST00000569916 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.89□□□□□ -0.51
CNOT1-220ENST00000569916 TRAPPC6AO75865 159 aa11.89□□□□□ -0.51
CNOT1-220ENST00000569916 LAMP1P11279 417 aa11.89□□□□□ -0.51
CNOT1-220ENST00000569916 CYP4B1P13584 511 aa11.89□□□□□ -0.51
CNOT1-220ENST00000569916 ACVR2AP27037 513 aa11.89□□□□□ -0.51
CNOT1-220ENST00000569916 HTR1EP28566 365 aa11.89□□□□□ -0.51
CNOT1-220ENST00000569916 MAP3K8P41279 467 aa11.89□□□□□ -0.51
CNOT1-220ENST00000569916 RPL14P50914 215 aaKnown RBP11.89□□□□□ -0.51
CNOT1-220ENST00000569916 MANFP55145 182 aaKnown RBP11.89□□□□□ -0.51
CNOT1-220ENST00000569916 NUP107P57740 925 aa11.89□□□□□ -0.51
CNOT1-220ENST00000569916 MAGOHP61326 146 aaKnown RBP11.89□□□□□ -0.51
CNOT1-220ENST00000569916 EMX2Q04743 252 aa11.89□□□□□ -0.51
CNOT1-220ENST00000569916 CRYZQ08257 329 aaKnown RBP11.89□□□□□ -0.51
CNOT1-220ENST00000569916 BST1Q10588 318 aa11.89□□□□□ -0.51
CNOT1-220ENST00000569916 STX3Q13277 289 aa11.89□□□□□ -0.51
CNOT1-220ENST00000569916 GAB1Q13480 694 aa11.89□□□□□ -0.51
CNOT1-220ENST00000569916 MLC1Q15049 377 aa11.89□□□□□ -0.51
CNOT1-220ENST00000569916 ZNHIT3Q15649 155 aaPredicted RBP11.89□□□□□ -0.51
CNOT1-220ENST00000569916 ZNF630Q2M218 657 aaPredicted RBP11.89□□□□□ -0.51
CNOT1-220ENST00000569916 SMU1Q2TAY7 513 aa11.89□□□□□ -0.51
CNOT1-220ENST00000569916 CYP27C1Q4G0S4 372 aa11.89□□□□□ -0.51
CNOT1-220ENST00000569916 WLSQ5T9L3 541 aa11.89□□□□□ -0.51
CNOT1-220ENST00000569916 HHATQ5VTY9 493 aa11.89□□□□□ -0.51
CNOT1-220ENST00000569916 RTL6Q6ICC9 239 aa11.89□□□□□ -0.51
CNOT1-220ENST00000569916 TMEM211Q6ICI0 200 aa11.89□□□□□ -0.51
CNOT1-220ENST00000569916 KRTCAP2Q8N6L1 136 aa11.89□□□□□ -0.51
CNOT1-220ENST00000569916 NUDT8Q8WV74 236 aa11.89□□□□□ -0.51
CNOT1-220ENST00000569916 SDCCAG3Q96C92 435 aa11.89□□□□□ -0.51
CNOT1-220ENST00000569916 GIMAP5Q96F15 307 aa11.89□□□□□ -0.51
CNOT1-220ENST00000569916 PPP1R36Q96LQ0 422 aa11.89□□□□□ -0.51
CNOT1-220ENST00000569916 PAIP2Q9BPZ3 127 aaKnown RBP11.89□□□□□ -0.51
CNOT1-220ENST00000569916 Q9N2J8 555 aa11.89□□□□□ -0.51
CNOT1-220ENST00000569916 EQTNQ9NQ60 294 aa11.89□□□□□ -0.51
CNOT1-220ENST00000569916 SIRT3Q9NTG7 399 aaPredicted RBP11.89□□□□□ -0.51
CNOT1-220ENST00000569916 ASIC5Q9NY37 505 aa11.89□□□□□ -0.51
CNOT1-220ENST00000569916 ACAD8Q9UKU7 415 aa11.89□□□□□ -0.51
CNOT1-220ENST00000569916 CBLCQ9ULV8 474 aa11.89□□□□□ -0.51
CNOT1-220ENST00000569916 MAPRE3Q9UPY8 281 aa11.89□□□□□ -0.51
CNOT1-220ENST00000569916 HCFC1P51610 2035 aa11.88□□□□□ -0.51
CNOT1-220ENST00000569916 C15orf38-AP3S2A0A0A6YYH1 394 aa11.88□□□□□ -0.51
CNOT1-220ENST00000569916 TTC36A6NLP5 189 aa11.88□□□□□ -0.51
CNOT1-220ENST00000569916 B4DXG7 233 aa11.88□□□□□ -0.51
CNOT1-220ENST00000569916 WDR1O75083 606 aa11.88□□□□□ -0.51
CNOT1-220ENST00000569916 G6PDP11413 515 aa11.88□□□□□ -0.51
CNOT1-220ENST00000569916 DDX5P17844 614 aaKnown RBP11.88□□□□□ -0.51
CNOT1-220ENST00000569916 EVI2BP34910 448 aa11.88□□□□□ -0.51
CNOT1-220ENST00000569916 SLC18A1P54219 525 aa11.88□□□□□ -0.51
CNOT1-220ENST00000569916 GAS1P54826 345 aa11.88□□□□□ -0.51
CNOT1-220ENST00000569916 C21orf58P58505 322 aa11.88□□□□□ -0.51
CNOT1-220ENST00000569916 MRPS22P82650 360 aaKnown RBP11.88□□□□□ -0.51
CNOT1-220ENST00000569916 MAD2L1Q13257 205 aaPredicted RBP11.88□□□□□ -0.51
CNOT1-220ENST00000569916 CASP8Q14790 479 aa11.88□□□□□ -0.51
CNOT1-220ENST00000569916 TOMM20Q15388 145 aa11.88□□□□□ -0.51
CNOT1-220ENST00000569916 EIPR1Q53HC9 387 aa11.88□□□□□ -0.51
CNOT1-220ENST00000569916 WIPI1Q5MNZ9 446 aaPredicted RBP11.88□□□□□ -0.51
CNOT1-220ENST00000569916 SP5Q6BEB4 398 aaPredicted RBP11.88□□□□□ -0.51
CNOT1-220ENST00000569916 RIMKLAQ8IXN7 391 aa11.88□□□□□ -0.51
CNOT1-220ENST00000569916 KIRREL3Q8IZU9 778 aa11.88□□□□□ -0.51
CNOT1-220ENST00000569916 FAM83FQ8NEG4 500 aaPredicted RBP11.88□□□□□ -0.51
CNOT1-220ENST00000569916 NUP43Q8NFH3 380 aa11.88□□□□□ -0.51
CNOT1-220ENST00000569916 MGARPQ8TDB4 240 aa11.88□□□□□ -0.51
CNOT1-220ENST00000569916 MS4A4EQ96PG1 132 aa11.88□□□□□ -0.51
CNOT1-220ENST00000569916 TTYH2Q9BSA4 534 aa11.88□□□□□ -0.51
CNOT1-220ENST00000569916 AKTIPQ9H8T0 292 aa11.88□□□□□ -0.51
CNOT1-220ENST00000569916 SERHLQ9NQF3 203 aa11.88□□□□□ -0.51
CNOT1-220ENST00000569916 PNPOQ9NVS9 261 aa11.88□□□□□ -0.51
CNOT1-220ENST00000569916 COQ3Q9NZJ6 369 aa11.88□□□□□ -0.51
CNOT1-220ENST00000569916 NOP53Q9NZM5 478 aaKnown RBP11.88□□□□□ -0.51
CNOT1-220ENST00000569916 FLRT3Q9NZU0 649 aa11.88□□□□□ -0.51
CNOT1-220ENST00000569916 RNF6Q9Y252 685 aa11.88□□□□□ -0.51
CNOT1-220ENST00000569916 EIF3LQ9Y262 564 aaKnown RBP11.88□□□□□ -0.51
CNOT1-220ENST00000569916 SLC6A5Q9Y345 797 aa11.88□□□□□ -0.51
CNOT1-220ENST00000569916 PCDHGB3Q9Y5G1 929 aa11.88□□□□□ -0.51
CNOT1-220ENST00000569916 KIAA1549Q9HCM3 1950 aa11.88□□□□□ -0.51
CNOT1-220ENST00000569916 CRYBG3Q68DQ2 2970 aa11.88□□□□□ -0.51
CNOT1-220ENST00000569916 A0A1W2PRB8 838 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms