RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	POU4F3	Q15319	338 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	FLYWCH1	Q4VC44	716 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	KLHL12	Q53G59	568 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	ZNF628	Q5EBL2	1059 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	LIPJ	Q5W064	366 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	C22orf42	Q6IC83	251 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	TRMT11	Q7Z4G4	463 aa	Known RBP	11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	ABI3BP	Q7Z7G0	1075 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	C1orf52	Q8N6N3	182 aa	Known RBP	11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	ARL6IP6	Q8N6S5	226 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	ST8SIA2	Q92186	375 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	MAL2	Q969L2	176 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	SGTB	Q96EQ0	304 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	KLHL15	Q96M94	604 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	HHIP	Q96QV1	700 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	TEX101	Q9BY14	249 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	PIGU	Q9H490	435 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	RERGL	Q9H628	205 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	TPT1P8	Q9HAU6	139 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	SLC23A2	Q9UGH3	650 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	COPS3	Q9UNS2	423 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	PCDHGB7	Q9Y5F8	929 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	LOC102723532	A0A0G2JNH3	316 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820		A0A1W2PQF6	199 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	SMIM30	A4D0T7	59 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	ZAR1L	A6NP61	321 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	TMEM229A	B2RXF0	380 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	PCDH17	O14917	1159 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	ST8SIA5	O15466	376 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	HBQ1	P09105	142 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	PRPS1L1	P21108	318 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	SDC2	P34741	201 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	TBPL1	P62380	186 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	PPP3R1	P63098	170 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	DOC2A	Q14183	400 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	TSC22D1	Q15714	1073 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	LTB4R	Q15722	352 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	XKR6	Q5GH73	641 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	MEDAG	Q5VYS4	303 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	CLECL1	Q8IZS7	167 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	GHDC	Q8N2G8	530 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	RNF175	Q8N4F7	328 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	OXR1	Q8N573	874 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	TMEM145	Q8NBT3	493 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	FAM46D	Q8NEK8	389 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	OR7G3	Q8NG95	312 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	WDR20	Q8TBZ3	569 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	YIPF5	Q969M3	257 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	APOLD1	Q96LR9	279 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	IL4I1	Q96RQ9	567 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	ZDHHC5	Q9C0B5	715 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	MALT1	Q9UDY8	824 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	ACSL5	Q9ULC5	683 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	FZD4	Q9ULV1	537 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	MGAT4A	Q9UM21	535 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	AP1M2	Q9Y6Q5	423 aa		11.29	□□□□□ -0.6
SPG7-222	ENST00000569820	PLRG1	O43660	514 aa	Known RBP	11.28	□□□□□ -0.6
SPG7-222	ENST00000569820	PLOD3	O60568	738 aa		11.28	□□□□□ -0.6
SPG7-222	ENST00000569820	OPN1SW	P03999	348 aa		11.28	□□□□□ -0.6
SPG7-222	ENST00000569820	RAF1	P04049	648 aa		11.28	□□□□□ -0.6
SPG7-222	ENST00000569820	TPO	P07202	933 aa		11.28	□□□□□ -0.6
SPG7-222	ENST00000569820	POU1F1	P28069	291 aa		11.28	□□□□□ -0.6
SPG7-222	ENST00000569820	OR1E2	P47887	323 aa		11.28	□□□□□ -0.6
SPG7-222	ENST00000569820	SRSF11	Q05519	484 aa	Known RBP	11.28	□□□□□ -0.6
SPG7-222	ENST00000569820	SF3A2	Q15428	464 aa	Known RBP	11.28	□□□□□ -0.6
SPG7-222	ENST00000569820	IFI44L	Q53G44	452 aa		11.28	□□□□□ -0.6
SPG7-222	ENST00000569820	GRHL2	Q6ISB3	625 aa		11.28	□□□□□ -0.6
SPG7-222	ENST00000569820	CNIH2	Q6PI25	160 aa		11.28	□□□□□ -0.6
SPG7-222	ENST00000569820	PDZD3	Q86UT5	571 aa		11.28	□□□□□ -0.6
SPG7-222	ENST00000569820	LRRTM4	Q86VH4	590 aa		11.28	□□□□□ -0.6
SPG7-222	ENST00000569820	TMEM203	Q969S6	136 aa		11.28	□□□□□ -0.6
SPG7-222	ENST00000569820	CMTM7	Q96FZ5	175 aa		11.28	□□□□□ -0.6
SPG7-222	ENST00000569820	APIP	Q96GX9	242 aa		11.28	□□□□□ -0.6
SPG7-222	ENST00000569820	KCTD7	Q96MP8	289 aa		11.28	□□□□□ -0.6
SPG7-222	ENST00000569820	NELL2	Q99435	816 aa		11.28	□□□□□ -0.6
SPG7-222	ENST00000569820	PIP5K1A	Q99755	562 aa		11.28	□□□□□ -0.6
SPG7-222	ENST00000569820	SLC25A19	Q9HC21	320 aa		11.28	□□□□□ -0.6
SPG7-222	ENST00000569820	TM7SF3	Q9NS93	570 aa		11.28	□□□□□ -0.6
SPG7-222	ENST00000569820	FTSJ1	Q9UET6	329 aa		11.28	□□□□□ -0.6
SPG7-222	ENST00000569820	CYB5R1	Q9UHQ9	305 aa		11.28	□□□□□ -0.6
SPG7-222	ENST00000569820	TINAG	Q9UJW2	476 aa		11.28	□□□□□ -0.6
SPG7-222	ENST00000569820	OR1A2	Q9Y585	309 aa		11.28	□□□□□ -0.6
SPG7-222	ENST00000569820	PCDHB11	Q9Y5F2	797 aa		11.28	□□□□□ -0.6
SPG7-222	ENST00000569820	ISM1	B1AKI9	464 aa		11.27	□□□□□ -0.6
SPG7-222	ENST00000569820	COX7A2	P14406	83 aa		11.27	□□□□□ -0.6
SPG7-222	ENST00000569820	HOXB2	P14652	356 aa		11.27	□□□□□ -0.6
SPG7-222	ENST00000569820	TEAD1	P28347	426 aa		11.27	□□□□□ -0.6
SPG7-222	ENST00000569820	PCGF2	P35227	344 aa		11.27	□□□□□ -0.6
SPG7-222	ENST00000569820	CRISP1	P54107	249 aa		11.27	□□□□□ -0.6
SPG7-222	ENST00000569820	RPA4	Q13156	261 aa		11.27	□□□□□ -0.6
SPG7-222	ENST00000569820	IL18	Q14116	193 aa		11.27	□□□□□ -0.6
SPG7-222	ENST00000569820	TEAD4	Q15561	434 aa		11.27	□□□□□ -0.6
SPG7-222	ENST00000569820	BICRAL	Q6AI39	1079 aa		11.27	□□□□□ -0.6
SPG7-222	ENST00000569820	UNC5D	Q6UXZ4	953 aa		11.27	□□□□□ -0.6
SPG7-222	ENST00000569820	AMZ2	Q86W34	360 aa		11.27	□□□□□ -0.6
SPG7-222	ENST00000569820	LRRC56	Q8IYG6	542 aa	Predicted RBP	11.27	□□□□□ -0.6
SPG7-222	ENST00000569820	NANOGP1	Q8N7R0	232 aa		11.27	□□□□□ -0.6
SPG7-222	ENST00000569820	PROKR2	Q8NFJ6	384 aa		11.27	□□□□□ -0.6
SPG7-222	ENST00000569820	OR9A1P	Q8NGU1	263 aa		11.27	□□□□□ -0.6
SPG7-222	ENST00000569820	KLK6	Q92876	244 aa		11.27	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms