RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 TACR1P25103 407 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 CRHR1P34998 444 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 PKNOX1P55347 436 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 CLDN15P56746 228 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 CLDN18P56856 261 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 DCAF7P61962 342 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 RPP38P78345 283 aaKnown RBP12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 ACSM2AQ08AH3 577 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 ACSM2BQ68CK6 577 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 FAM71E1Q6IPT2 247 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 CDC20BQ86Y33 519 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 TRIM42Q8IWZ5 723 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 GBP7Q8N8V2 638 aaPredicted RBP12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 OR2W6PQ8NHA6 318 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 LINC01560Q8TB33 94 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 ZPLD1Q8TCW7 415 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 EFHD2Q96C19 240 aaPredicted RBP12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 CLEC4MQ9H2X3 399 aaPredicted RBP12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 CALHM2Q9HA72 323 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 MID1IP1Q9NPA3 183 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 PFDN4Q9NQP4 134 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 NMRK1Q9NWW6 199 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 ST6GALNAC2Q9UJ37 374 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 GRID1Q9ULK0 1009 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 PTGDR2Q9Y5Y4 395 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 PRR14LQ5THK1 2151 aa12.56□□□□□ -0.4
GTF3C1-211ENST00000569653 TLDC2A0PJX2 215 aa12.55□□□□□ -0.4
GTF3C1-211ENST00000569653 CLCA1A8K7I4 914 aa12.55□□□□□ -0.4
GTF3C1-211ENST00000569653 CBR3O75828 277 aa12.55□□□□□ -0.4
GTF3C1-211ENST00000569653 TGM6O95932 706 aa12.55□□□□□ -0.4
GTF3C1-211ENST00000569653 JUNP05412 331 aaKnown RBP12.55□□□□□ -0.4
GTF3C1-211ENST00000569653 ANXA4P09525 319 aaPredicted RBP12.55□□□□□ -0.4
GTF3C1-211ENST00000569653 CYP4B1P13584 511 aa12.55□□□□□ -0.4
GTF3C1-211ENST00000569653 KRT4P19013 534 aa12.55□□□□□ -0.4
GTF3C1-211ENST00000569653 GRK2P25098 689 aa12.55□□□□□ -0.4
GTF3C1-211ENST00000569653 CTSSP25774 331 aa12.55□□□□□ -0.4
GTF3C1-211ENST00000569653 MC3RP41968 323 aa12.55□□□□□ -0.4
GTF3C1-211ENST00000569653 NAA20P61599 178 aa12.55□□□□□ -0.4
GTF3C1-211ENST00000569653 SRYQ05066 204 aa12.55□□□□□ -0.4
GTF3C1-211ENST00000569653 SPIN4Q56A73 249 aa12.55□□□□□ -0.4
GTF3C1-211ENST00000569653 ZYG11AQ6WRX3 759 aa12.55□□□□□ -0.4
GTF3C1-211ENST00000569653 LARP4Q71RC2 724 aaKnown RBP eCLIP12.55□□□□□ -0.41e-8■□□□□ 8.1
GTF3C1-211ENST00000569653 PLCZ1Q86YW0 608 aa12.55□□□□□ -0.4
GTF3C1-211ENST00000569653 SLC44A2Q8IWA5 706 aaPredicted RBP12.55□□□□□ -0.4
GTF3C1-211ENST00000569653 MREGQ8N565 214 aa12.55□□□□□ -0.4
GTF3C1-211ENST00000569653 CCNYL1Q8N7R7 359 aa12.55□□□□□ -0.4
GTF3C1-211ENST00000569653 OR14L1PQ8NHC6 308 aa12.55□□□□□ -0.4
GTF3C1-211ENST00000569653 FAM222BQ8WU58 562 aa12.55□□□□□ -0.4
GTF3C1-211ENST00000569653 ERP27Q96DN0 273 aa12.55□□□□□ -0.4
GTF3C1-211ENST00000569653 EGLN2Q96KS0 407 aa12.55□□□□□ -0.4
GTF3C1-211ENST00000569653 TMUB1Q9BVT8 246 aa12.55□□□□□ -0.4
GTF3C1-211ENST00000569653 IQCGQ9H095 443 aaKnown RBP12.55□□□□□ -0.4
GTF3C1-211ENST00000569653 TAS2R10Q9NYW0 307 aa12.55□□□□□ -0.4
GTF3C1-211ENST00000569653 MID2Q9UJV3 735 aa12.55□□□□□ -0.4
GTF3C1-211ENST00000569653 PLEKHA6Q9Y2H5 1048 aa12.55□□□□□ -0.4
GTF3C1-211ENST00000569653 POLR3HQ9Y535 204 aaPredicted RBP12.55□□□□□ -0.4
GTF3C1-211ENST00000569653 NUP214P35658 2090 aaPredicted RBP12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 NAV3Q8IVL0 2385 aa12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 EEF1E1-BLOC1S5C9J1V9 151 aa12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 H0YC42 278 aa12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 UPK1AO00322 258 aa12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 EEF1E1O43324 174 aaKnown RBP12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 FADS1O60427 444 aa12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 PLIN3O60664 434 aa12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 TUBBP07437 444 aa12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 TMIGD3P0DMS9 266 aaPredicted RBP12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 CD1EP15812 388 aa12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 ZNF708P17019 499 aa12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 DDCP20711 480 aa12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 SRD5A2P31213 254 aa12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 TPD52P55327 224 aaPredicted RBP12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 ZNF763Q0D2J5 394 aa12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 C2orf80Q0P641 193 aa12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 DAZAP2Q15038 168 aaPredicted RBP12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 TMEM107Q6UX40 140 aa12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 FRMD7Q6ZUT3 714 aa12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 FAM9CQ8IZT9 166 aa12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 GCNT2Q8N0V5 402 aa12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 C4orf33Q8N1A6 199 aa12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 FADS6Q8N9I5 356 aa12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 CCDC63Q8NA47 563 aa12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 CDC26Q8NHZ8 85 aa12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 UCN2Q96RP3 112 aa12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 FOXC2Q99958 501 aa12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 SHCBP1LQ9BZQ2 653 aa12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 ROPN1BQ9BZX4 212 aaPredicted RBP12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 GLIPR2Q9H4G4 154 aa12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 ROPN1Q9HAT0 212 aaPredicted RBP12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 SLC24A3Q9HC58 644 aa12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 MYNNQ9NPC7 610 aa12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 MKS1Q9NXB0 559 aa12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 LGALS13Q9UHV8 139 aa12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 RPH3AQ9Y2J0 694 aaPredicted RBP12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 HEATR5AQ86XA9 2040 aa12.54□□□□□ -0.4
GTF3C1-211ENST00000569653 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.53□□□□□ -0.4
GTF3C1-211ENST00000569653 CCDC151A5D8V7 595 aa12.53□□□□□ -0.4
GTF3C1-211ENST00000569653 H0Y3Z8 333 aa12.53□□□□□ -0.4
GTF3C1-211ENST00000569653 PLOD2O00469 737 aa12.53□□□□□ -0.4
GTF3C1-211ENST00000569653 CTIFO43310 598 aaKnown RBP12.53□□□□□ -0.4
GTF3C1-211ENST00000569653 HCRTR2O43614 444 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms