RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 COX18Q8N8Q8 333 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 PNPT1Q8TCS8 783 aaKnown RBP14.81□□□□□ -0.04
USB1-215ENST00000569252 XAGE5Q8WWM1 108 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 PSMF1Q92530 271 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 BTBD9Q96Q07 612 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 CGREF1Q99674 301 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.81□□□□□ -0.04
USB1-215ENST00000569252 PIGUQ9H490 435 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 ZNF552Q9H707 407 aaPredicted RBP14.81□□□□□ -0.04
USB1-215ENST00000569252 HPF1Q9NWY4 346 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 NDE1Q9NXR1 346 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 SLAMF8Q9P0V8 285 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 MAP10Q9P2G4 905 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 CBLCQ9ULV8 474 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 TP53TG5Q9Y2B4 290 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 AP3M1Q9Y2T2 418 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 L3MBTL1Q9Y468 752 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 NPFFR2Q9Y5X5 522 aa14.81□□□□□ -0.04
USB1-215ENST00000569252 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 CCT8L1PA6NM43 557 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 TP53I11O14683 189 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 HS6ST1O60243 411 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 REM1O75628 298 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 PSMG1O95456 288 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 NAGAP17050 411 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 CALB2P22676 271 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 SOX18P35713 384 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 CASP9P55211 416 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 PLCXD2Q0VAA5 305 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 GAB1Q13480 694 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 GNA13Q14344 377 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 NNATQ16517 81 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 RUNDC3AQ59EK9 446 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 IL20RBQ6UXL0 311 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 DLEU7Q6UYE1 221 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 C16orf62Q7Z3J2 963 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 WDR53Q7Z5U6 358 aaPredicted RBP14.8□□□□□ -0.04
USB1-215ENST00000569252 RETREG3Q86VR2 466 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 SLC34A3Q8N130 599 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 BEST3Q8N1M1 668 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 AMER2Q8N7J2 671 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 SLC16A11Q8NCK7 471 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 OR52N2Q8NGI0 321 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 FBXO30Q8TB52 745 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 TMEM125Q96AQ2 219 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 GIMAP5Q96F15 307 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 ANKRD27Q96NW4 1050 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 PSMG3-AS1Q96PY0 264 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 OR7D2Q96RA2 312 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 RASL10BQ96S79 203 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 G6PC3Q9BUM1 346 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 BTBD2Q9BX70 525 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 NXF5Q9H1B4 397 aaKnown RBP14.8□□□□□ -0.04
USB1-215ENST00000569252 OR51I1Q9H343 314 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 DUSP22Q9NRW4 184 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 GPATCH2Q9NW75 528 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 VAPAQ9P0L0 249 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 DTX4Q9Y2E6 619 aa14.8□□□□□ -0.04
USB1-215ENST00000569252 RP1L1Q8IWN7 2480 aaPredicted RBP14.8□□□□□ -0.04
USB1-215ENST00000569252 C15orf38-AP3S2A0A0A6YYH1 394 aa14.79□□□□□ -0.04
USB1-215ENST00000569252 TMEM200CA6NKL6 621 aa14.79□□□□□ -0.04
USB1-215ENST00000569252 TO15178 435 aa14.79□□□□□ -0.04
USB1-215ENST00000569252 ASNA1O43681 348 aa14.79□□□□□ -0.04
USB1-215ENST00000569252 NME6O75414 186 aaPredicted RBP14.79□□□□□ -0.04
USB1-215ENST00000569252 NKX2-2O95096 273 aa14.79□□□□□ -0.04
USB1-215ENST00000569252 AK1P00568 194 aa14.79□□□□□ -0.04
USB1-215ENST00000569252 CT45A8P0DMV1 189 aa14.79□□□□□ -0.04
USB1-215ENST00000569252 CT45A9P0DMV2 189 aa14.79□□□□□ -0.04
USB1-215ENST00000569252 OR12D1P0DN82 309 aa14.79□□□□□ -0.04
USB1-215ENST00000569252 ATP6V1C1P21283 382 aa14.79□□□□□ -0.04
USB1-215ENST00000569252 TRHRP34981 398 aaPredicted RBP14.79□□□□□ -0.04
USB1-215ENST00000569252 SOX11P35716 441 aa14.79□□□□□ -0.04
USB1-215ENST00000569252 RFX3P48380 749 aa14.79□□□□□ -0.04
USB1-215ENST00000569252 CORO7P57737 925 aa14.79□□□□□ -0.04
USB1-215ENST00000569252 RPS26P62854 115 aaKnown RBP14.79□□□□□ -0.04
USB1-215ENST00000569252 POU6F2P78424 691 aaPredicted RBP14.79□□□□□ -0.04
USB1-215ENST00000569252 HPCAP84074 193 aa14.79□□□□□ -0.04
USB1-215ENST00000569252 PSG6Q00889 435 aa14.79□□□□□ -0.04
USB1-215ENST00000569252 FADDQ13158 208 aa14.79□□□□□ -0.04
USB1-215ENST00000569252 C4orf17Q53FE4 359 aa14.79□□□□□ -0.04
USB1-215ENST00000569252 CT45A2Q5DJT8 189 aa14.79□□□□□ -0.04
USB1-215ENST00000569252 TNFAIP8L2Q6P589 184 aaPredicted RBP14.79□□□□□ -0.04
USB1-215ENST00000569252 C16orf47Q6ZP98 133 aaPredicted RBP14.79□□□□□ -0.04
USB1-215ENST00000569252 ARPINQ7Z6K5 226 aa14.79□□□□□ -0.04
USB1-215ENST00000569252 ARMC10Q8N2F6 343 aa14.79□□□□□ -0.04
USB1-215ENST00000569252 MIPOL1Q8TD10 442 aa14.79□□□□□ -0.04
USB1-215ENST00000569252 HAS2Q92819 552 aa14.79□□□□□ -0.04
USB1-215ENST00000569252 TMCO6Q96DC7 493 aa14.79□□□□□ -0.04
USB1-215ENST00000569252 SMAD5Q99717 465 aaKnown RBP14.79□□□□□ -0.04
USB1-215ENST00000569252 ECSITQ9BQ95 431 aa14.79□□□□□ -0.04
USB1-215ENST00000569252 ZBTB20Q9HC78 741 aaPredicted RBP14.79□□□□□ -0.04
USB1-215ENST00000569252 ARL8BQ9NVJ2 186 aa14.79□□□□□ -0.04
USB1-215ENST00000569252 TUBD1Q9UJT1 453 aa14.79□□□□□ -0.04
USB1-215ENST00000569252 LIPT1Q9Y234 373 aa14.79□□□□□ -0.04
USB1-215ENST00000569252 C5orf58C9J3I9 102 aa14.78□□□□□ -0.04
USB1-215ENST00000569252 DPM1O60762 260 aa14.78□□□□□ -0.04
USB1-215ENST00000569252 ABCB7O75027 752 aa14.78□□□□□ -0.04
USB1-215ENST00000569252 UNC5CO95185 931 aa14.78□□□□□ -0.04
USB1-215ENST00000569252 WDPCPO95876 746 aa14.78□□□□□ -0.04
USB1-215ENST00000569252 PDGFAP04085 211 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms