RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 AVPR1BP47901 424 aa16.93■□□□□ 0.3
SMPD3-211ENST00000568373 LSM11P83369 360 aaKnown RBP eCLIP16.93■□□□□ 0.3
SMPD3-211ENST00000568373 TRUB1Q8WWH5 349 aaKnown RBP16.93■□□□□ 0.3
SMPD3-211ENST00000568373 DIO2Q92813 273 aa16.93■□□□□ 0.3
SMPD3-211ENST00000568373 ANKRD9Q96BM1 317 aaPredicted RBP16.93■□□□□ 0.3
SMPD3-211ENST00000568373 CACYBPQ9HB71 228 aaKnown RBP16.93■□□□□ 0.3
SMPD3-211ENST00000568373 NECTIN3Q9NQS3 549 aa16.93■□□□□ 0.3
SMPD3-211ENST00000568373 MAT2BQ9NZL9 334 aa16.93■□□□□ 0.3
SMPD3-211ENST00000568373 CNOT2Q9NZN8 540 aaKnown RBP16.93■□□□□ 0.3
SMPD3-211ENST00000568373 ALOX5P09917 674 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 CCNYL3P0C7X3 344 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 TNNI3P19429 210 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 ENTPD1P49961 510 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 RGS8P57771 180 aaPredicted RBP16.92■□□□□ 0.3
SMPD3-211ENST00000568373 MGAT2Q10469 447 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 TRAM2Q15035 370 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 PRTGQ2VWP7 1150 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 ENTPD8Q5MY95 495 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 CASP12Q6UXS9 341 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 CDRT4Q8N9R6 151 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 HLA-CQ95604 372 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 IL4I1Q96RQ9 567 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 GPA33Q99795 319 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 ZNF350Q9GZX5 532 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 ANKRD19PQ9H560 264 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 DUSP22Q9NRW4 184 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.92■□□□□ 0.3
SMPD3-211ENST00000568373 ZNF232Q9UNY5 417 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 A0A087WUU8 490 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 A0A1B0GVG6 124 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 LILRA5A6NI73 299 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 CPSF4LA6NMK7 179 aaKnown RBP16.92■□□□□ 0.3
SMPD3-211ENST00000568373 SRPX2O60687 465 aaPredicted RBP16.92■□□□□ 0.3
SMPD3-211ENST00000568373 PROS1P07225 676 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 IFNA8P32881 189 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 TRHRP34981 398 aaPredicted RBP16.92■□□□□ 0.3
SMPD3-211ENST00000568373 TGFBR2P37173 567 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 STARD6P59095 220 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 ST3GAL3Q11203 375 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 DUSP8Q13202 625 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 LARS2Q15031 903 aaKnown RBP16.92■□□□□ 0.3
SMPD3-211ENST00000568373 CCNJQ5T5M9 372 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 PTCRAQ6ISU1 281 aaPredicted RBP16.92■□□□□ 0.3
SMPD3-211ENST00000568373 ZCCHC12Q6PEW1 402 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 CTHRC1Q96CG8 243 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 DTNBP1Q96EV8 351 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 TCTN2Q96GX1 697 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 STACQ99469 402 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 MAP3K3Q99759 626 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 SEMA4GQ9NTN9 838 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 SATB2Q9UPW6 733 aa16.92■□□□□ 0.3
SMPD3-211ENST00000568373 AGAP5A6NIR3 686 aa16.91■□□□□ 0.3
SMPD3-211ENST00000568373 AP3D1O14617 1153 aa16.91■□□□□ 0.3
SMPD3-211ENST00000568373 CHST10O43529 356 aa16.91■□□□□ 0.3
SMPD3-211ENST00000568373 THBS1P07996 1170 aa16.91■□□□□ 0.3
SMPD3-211ENST00000568373 CD36P16671 472 aa16.91■□□□□ 0.3
SMPD3-211ENST00000568373 GSTM3P21266 225 aa16.91■□□□□ 0.3
SMPD3-211ENST00000568373 EMP3P54852 163 aa16.91■□□□□ 0.3
SMPD3-211ENST00000568373 RPL6Q02878 288 aaKnown RBP16.91■□□□□ 0.3
SMPD3-211ENST00000568373 IRF3Q14653 427 aa16.91■□□□□ 0.3
SMPD3-211ENST00000568373 TMEM201Q5SNT2 666 aa16.91■□□□□ 0.3
SMPD3-211ENST00000568373 DCST2Q5T1A1 773 aa16.91■□□□□ 0.3
SMPD3-211ENST00000568373 OR8J1Q8NGP2 316 aa16.91■□□□□ 0.3
SMPD3-211ENST00000568373 Q96MT0 163 aa16.91■□□□□ 0.3
SMPD3-211ENST00000568373 SLC38A3Q99624 504 aa16.91■□□□□ 0.3
SMPD3-211ENST00000568373 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.91■□□□□ 0.3
SMPD3-211ENST00000568373 MIR1-1HGQ9H1L0 117 aa16.91■□□□□ 0.3
SMPD3-211ENST00000568373 OCEL1Q9H607 264 aa16.91■□□□□ 0.3
SMPD3-211ENST00000568373 SLC25A19Q9HC21 320 aa16.91■□□□□ 0.3
SMPD3-211ENST00000568373 CLDN24A6NM45 220 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 ENTPD6O75354 484 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 CLPXO76031 633 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 CT62P0C5K7 136 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 SLC35E2P0CK97 266 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 ADORA3P0DMS8 318 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 IFNGR2P38484 337 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 SLC15A1P46059 708 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 EXOSC7Q15024 291 aaKnown RBP16.9■□□□□ 0.3
SMPD3-211ENST00000568373 TIGD6Q17RP2 521 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 ZNF836Q6ZNA1 936 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 ZNF619Q8N2I2 560 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 COX18Q8N8Q8 333 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 SHDQ96IW2 340 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 PLGRKTQ9HBL7 147 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 FBXL21Q9UKT6 434 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 SPTBP11277 2137 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 A0A0A6YYC8 382 aaPredicted RBP16.9■□□□□ 0.3
SMPD3-211ENST00000568373 I3L1I5 382 aaPredicted RBP16.9■□□□□ 0.3
SMPD3-211ENST00000568373 M0R082 166 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 STX11O75558 287 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 INHBBP09529 407 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 PIPP12273 146 aaPredicted RBP16.9■□□□□ 0.3
SMPD3-211ENST00000568373 LIPAP38571 399 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 MAP3K8P41279 467 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 EEF1A1P68104 462 aaKnown RBP16.9■□□□□ 0.3
SMPD3-211ENST00000568373 HOXC5Q00444 222 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 OCA2Q04671 838 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 GPR68Q15743 365 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 EIPR1Q53HC9 387 aa16.9■□□□□ 0.3
SMPD3-211ENST00000568373 PLEKHM3Q6ZWE6 761 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms