RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 RECQLP46063 649 aaPredicted RBP5.13□□□□□ -1.59
LINC01541-202ENST00000568095 AVPR1BP47901 424 aa5.13□□□□□ -1.59
LINC01541-202ENST00000568095 CCT3P49368 545 aaKnown RBP5.13□□□□□ -1.59
LINC01541-202ENST00000568095 MMP16P51512 607 aa5.13□□□□□ -1.59
LINC01541-202ENST00000568095 CAV3P56539 151 aa5.13□□□□□ -1.59
LINC01541-202ENST00000568095 RAB40BQ12829 278 aa5.13□□□□□ -1.59
LINC01541-202ENST00000568095 ZNF169Q14929 603 aaPredicted RBP5.13□□□□□ -1.59
LINC01541-202ENST00000568095 HEPACAMQ14CZ8 416 aa5.13□□□□□ -1.59
LINC01541-202ENST00000568095 ZMYND11Q15326 602 aa5.13□□□□□ -1.59
LINC01541-202ENST00000568095 CPSF6Q16630 551 aaKnown RBP eCLIP5.13□□□□□ -1.59
LINC01541-202ENST00000568095 SYT14P1Q58G82 188 aa5.13□□□□□ -1.59
LINC01541-202ENST00000568095 XKR6Q5GH73 641 aa5.13□□□□□ -1.59
LINC01541-202ENST00000568095 C10orf120Q5SQS8 335 aa5.13□□□□□ -1.59
LINC01541-202ENST00000568095 ANXA8L1Q5VT79 327 aa5.13□□□□□ -1.59
LINC01541-202ENST00000568095 B3GNTL1Q67FW5 361 aaPredicted RBP5.13□□□□□ -1.59
LINC01541-202ENST00000568095 RAET1GQ6H3X3 334 aa5.13□□□□□ -1.59
LINC01541-202ENST00000568095 SLC30A6Q6NXT4 461 aa5.13□□□□□ -1.59
LINC01541-202ENST00000568095 HSD17B13Q7Z5P4 300 aaPredicted RBP5.13□□□□□ -1.59
LINC01541-202ENST00000568095 NPAS3Q8IXF0 933 aa5.13□□□□□ -1.59
LINC01541-202ENST00000568095 CPXM2Q8N436 756 aa5.13□□□□□ -1.59
LINC01541-202ENST00000568095 KREMEN2Q8NCW0 462 aa5.13□□□□□ -1.59
LINC01541-202ENST00000568095 OR5T2Q8NGG2 359 aa5.13□□□□□ -1.59
LINC01541-202ENST00000568095 WDR20Q8TBZ3 569 aa5.13□□□□□ -1.59
LINC01541-202ENST00000568095 FOXJ1Q92949 421 aa5.13□□□□□ -1.59
LINC01541-202ENST00000568095 RIT1Q92963 219 aa5.13□□□□□ -1.59
LINC01541-202ENST00000568095 TIFAQ96CG3 184 aa5.13□□□□□ -1.59
LINC01541-202ENST00000568095 CXorf40BQ96DE9 158 aa5.13□□□□□ -1.59
LINC01541-202ENST00000568095 MTERF3Q96E29 417 aa5.13□□□□□ -1.59
LINC01541-202ENST00000568095 ZNF582Q96NG8 517 aaPredicted RBP5.13□□□□□ -1.59
LINC01541-202ENST00000568095 NPAS1Q99742 590 aa5.13□□□□□ -1.59
LINC01541-202ENST00000568095 THAP7Q9BT49 309 aaPredicted RBP5.13□□□□□ -1.59
LINC01541-202ENST00000568095 WACQ9BTA9 647 aa5.13□□□□□ -1.59
LINC01541-202ENST00000568095 ZNF416Q9BWM5 594 aa5.13□□□□□ -1.59
LINC01541-202ENST00000568095 TMPRSS13Q9BYE2 586 aa5.13□□□□□ -1.59
LINC01541-202ENST00000568095 ZNF436Q9C0F3 470 aaPredicted RBP5.13□□□□□ -1.59
LINC01541-202ENST00000568095 ZCCHC4Q9H5U6 513 aa5.13□□□□□ -1.59
LINC01541-202ENST00000568095 MCCC2Q9HCC0 563 aa5.13□□□□□ -1.59
LINC01541-202ENST00000568095 SARS2Q9NP81 518 aaKnown RBP5.13□□□□□ -1.59
LINC01541-202ENST00000568095 ASB6Q9NWX5 421 aa5.13□□□□□ -1.59
LINC01541-202ENST00000568095 SPIN1Q9Y657 262 aaPredicted RBP5.13□□□□□ -1.59
LINC01541-202ENST00000568095 PRSS21Q9Y6M0 314 aa5.13□□□□□ -1.59
LINC01541-202ENST00000568095 CKAP5Q14008 2032 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 TRBV4-1A0A0J9YWV2 114 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 HYAL3O43820 417 aaPredicted RBP5.12□□□□□ -1.59
LINC01541-202ENST00000568095 UGDHO60701 494 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 MMP20O60882 483 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 SEMA7AO75326 666 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 CPSF4O95639 269 aaKnown RBP5.12□□□□□ -1.59
LINC01541-202ENST00000568095 TCRBP04435 133 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 NMBP08949 121 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 ACP2P11117 423 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 COX7A2P14406 83 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 MAOBP27338 520 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 AOAHP28039 575 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 GSTM5P46439 218 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 ZNF81P51508 661 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 EPHB3P54753 998 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 LIM2P55344 173 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 CDK5Q00535 292 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 MLLT1Q03111 559 aaPredicted RBP5.12□□□□□ -1.59
LINC01541-202ENST00000568095 NFATC2Q13469 925 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 SCARB2Q14108 478 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 PUM1Q14671 1186 aaKnown RBP eCLIP5.12□□□□□ -1.59
LINC01541-202ENST00000568095 ZNF77Q15935 545 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 ETFDHQ16134 617 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 SNAPC1Q16533 368 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 ST3GAL2Q16842 350 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 PABPC1L2AQ5JQF8 200 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 SPOUT1Q5T280 376 aaKnown RBP5.12□□□□□ -1.59
LINC01541-202ENST00000568095 RNF219Q5W0B1 726 aaPredicted RBP5.12□□□□□ -1.59
LINC01541-202ENST00000568095 FRG2Q64ET8 278 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 LUZP2Q86TE4 346 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 LRRC28Q86X40 367 aaPredicted RBP5.12□□□□□ -1.59
LINC01541-202ENST00000568095 SYT12Q8IV01 421 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 DENND1CQ8IV53 801 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 SLC30A8Q8IWU4 369 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 PM20D2Q8IYS1 436 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 ZBTB2Q8N680 514 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 CLRN3Q8NCR9 226 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 BVESQ8NE79 360 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 HAVCR2Q8TDQ0 301 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 RFT1Q96AA3 541 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 APOLD1Q96LR9 279 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 FRG2BQ96QU4 278 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 RSPO3Q9BXY4 272 aaPredicted RBP5.12□□□□□ -1.59
LINC01541-202ENST00000568095 LMAN2LQ9H0V9 348 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 ELOVL6Q9H5J4 265 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 C11orf16Q9NQ32 467 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 SLC39A1Q9NY26 324 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 COPS3Q9UNS2 423 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 MAP4K5Q9Y4K4 846 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 USP34Q70CQ2 3546 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 TICRRQ7Z2Z1 1910 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 FAAHO00519 579 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 LRRTM2O43300 516 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 KDELR3O43731 214 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 TMEM127O75204 238 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 OPN1SWP03999 348 aa5.12□□□□□ -1.59
LINC01541-202ENST00000568095 IGFBP1P08833 259 aaPredicted RBP5.12□□□□□ -1.59
LINC01541-202ENST00000568095 HNRNPA1P09651 372 aaKnown RBP eCLIP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms