RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 RHBDF1Q96CC6 855 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 HIST1H2AHQ96KK5 128 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 MAGEB18Q96M61 343 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 PKP4Q99569 1192 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 HIST1H2AJQ99878 128 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 TMEM79Q9BSE2 394 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 H2AFJQ9BTM1 129 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 TRAF4Q9BUZ4 470 aaPredicted RBP8.74□□□□□ -1.01
CAPN3-216ENST00000567071 GATA5Q9BWX5 397 aaPredicted RBP8.74□□□□□ -1.01
CAPN3-216ENST00000567071 GRIP2Q9C0E4 1043 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 NGBQ9NPG2 151 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 PRTFDC1Q9NRG1 225 aa8.74□□□□□ -1.01
CAPN3-216ENST00000567071 PTBP2Q9UKA9 531 aaKnown RBP8.74□□□□□ -1.01
CAPN3-216ENST00000567071 E7ENX8 843 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 STX16-NPEPL1H3BU86 382 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 STX16O14662 325 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 TP53I11O14683 189 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 TAPBPO15533 448 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 TRIM3O75382 744 aaPredicted RBP8.73□□□□□ -1.01
CAPN3-216ENST00000567071 LYPLA1O75608 230 aaPredicted RBP8.73□□□□□ -1.01
CAPN3-216ENST00000567071 LRATO95237 230 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 SLC16A8O95907 504 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 ZNF888P0CJ79 500 aaPredicted RBP8.73□□□□□ -1.01
CAPN3-216ENST00000567071 TSPAN8P19075 237 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 TNNI3P19429 210 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 IMPA1P29218 277 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 PPP2R1BP30154 601 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 HSPA7P48741 367 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 PRKAA2P54646 552 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 NAGLUP54802 743 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 ALDH18A1P54886 795 aaKnown RBP8.73□□□□□ -1.01
CAPN3-216ENST00000567071 AP1S2P56377 157 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 HSD17B7P56937 341 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 HERVK_113P63132 956 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 BST1Q10588 318 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 PWP1Q13610 501 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 EXOC3L2Q2M3D2 409 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 ZNF672Q499Z4 452 aaPredicted RBP8.73□□□□□ -1.01
CAPN3-216ENST00000567071 CFAP157Q5JU67 520 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 SULT1C3Q6IMI6 304 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 ALKBH2Q6NS38 261 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 C22orf34Q6ZV56 151 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 C17orf64Q86WR6 236 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 SLC22A9Q8IVM8 553 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 SCUBE1Q8IWY4 988 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 ZNF525Q8N782 197 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 MFSD9Q8NBP5 474 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 OR10G3Q8NGC4 313 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 RAB3IL1Q8TBN0 382 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 C10orf105Q8TEF2 133 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 ZNF480Q8WV37 535 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 CKAP2Q8WWK9 683 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 ZNF75CPQ92670 426 aaPredicted RBP8.73□□□□□ -1.01
CAPN3-216ENST00000567071 DIO2Q92813 273 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 MRPL24Q96A35 216 aaKnown RBP8.73□□□□□ -1.01
CAPN3-216ENST00000567071 PYCR2Q96C36 320 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 FBXL8Q96CD0 374 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 CCDC126Q96EE4 140 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 JMJD8Q96S16 334 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 ERVK-6Q9BXR3 956 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 CAPS2Q9BXY5 557 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 PCBD2Q9H0N5 130 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 CCDC177Q9NQR7 707 aaPredicted RBP8.73□□□□□ -1.01
CAPN3-216ENST00000567071 TMCO1Q9UM00 188 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 PROCRQ9UNN8 238 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 C15orf41Q9Y2V0 281 aa8.73□□□□□ -1.01
CAPN3-216ENST00000567071 ANKRD33BA6NCL7 494 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 ITM2AO43736 263 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 CCNT2O60583 730 aaKnown RBP8.72□□□□□ -1.01
CAPN3-216ENST00000567071 ZNF354AO60765 605 aaPredicted RBP8.72□□□□□ -1.01
CAPN3-216ENST00000567071 SUPT7LO94864 414 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 WDR47O94967 919 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 SNX4O95219 450 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 B3GALT4O96024 378 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 SERPINE1P05121 402 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 CHRNGP07510 517 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 RPS17P08708 135 aaKnown RBP8.72□□□□□ -1.01
CAPN3-216ENST00000567071 CD8BP10966 210 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 PCMT1P22061 227 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 ARRB2P32121 409 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 LSP1P33241 339 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 GDF5P43026 501 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 DNAJB13P59910 316 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 TBPL1P62380 186 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 CDKL1Q00532 357 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 STX3Q13277 289 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 NAE1Q13564 534 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 UNC50Q53HI1 259 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 ZNF678Q5SXM1 525 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 AGAP6Q5VW22 663 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 FAM219BQ5XKK7 198 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 AGTRAPQ6RW13 159 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 DNAJC14Q6Y2X3 702 aaPredicted RBP8.72□□□□□ -1.01
CAPN3-216ENST00000567071 PEG10Q86TG7 708 aaKnown RBP8.72□□□□□ -1.01
CAPN3-216ENST00000567071 TRIM42Q8IWZ5 723 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 TCAIMQ8N3R3 496 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 SNX31Q8N9S9 440 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 NUP43Q8NFH3 380 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 UBTD2Q8WUN7 234 aa8.72□□□□□ -1.01
CAPN3-216ENST00000567071 ATL1Q8WXF7 558 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms