RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 DOCK7Q96N67 2140 aa18.35■□□□□ 0.53
CLN6-207ENST00000566347 NME6O75414 186 aaPredicted RBP18.34■□□□□ 0.53
CLN6-207ENST00000566347 IL18BPO95998 194 aa18.34■□□□□ 0.53
CLN6-207ENST00000566347 JUNP05412 331 aaKnown RBP18.34■□□□□ 0.53
CLN6-207ENST00000566347 LIPMQ5VYY2 423 aa18.34■□□□□ 0.53
CLN6-207ENST00000566347 NOXRED1Q6NXP6 359 aa18.34■□□□□ 0.53
CLN6-207ENST00000566347 AAGABQ6PD74 315 aa18.34■□□□□ 0.53
CLN6-207ENST00000566347 TRIM42Q8IWZ5 723 aa18.34■□□□□ 0.53
CLN6-207ENST00000566347 LRRN4CLQ8ND94 238 aa18.34■□□□□ 0.53
CLN6-207ENST00000566347 RNF138Q8WVD3 245 aa18.34■□□□□ 0.53
CLN6-207ENST00000566347 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.34■□□□□ 0.532e-7■■■■■ 68.1
CLN6-207ENST00000566347 ZFP3Q96NJ6 502 aa18.34■□□□□ 0.53
CLN6-207ENST00000566347 C19orf53Q9UNZ5 99 aaPredicted RBP18.34■□□□□ 0.53
CLN6-207ENST00000566347 POLR3HQ9Y535 204 aaPredicted RBP18.34■□□□□ 0.53
CLN6-207ENST00000566347 SMIM23A6NLE4 172 aa18.33■□□□□ 0.52
CLN6-207ENST00000566347 H0Y3Z8 333 aa18.33■□□□□ 0.52
CLN6-207ENST00000566347 PLOD2O00469 737 aa18.33■□□□□ 0.52
CLN6-207ENST00000566347 CTAG2O75638 210 aa18.33■□□□□ 0.52
CLN6-207ENST00000566347 KRT4P19013 534 aa18.33■□□□□ 0.52
CLN6-207ENST00000566347 GRK2P25098 689 aa18.33■□□□□ 0.52
CLN6-207ENST00000566347 MC3RP41968 323 aa18.33■□□□□ 0.52
CLN6-207ENST00000566347 GFRA1P56159 465 aa18.33■□□□□ 0.52
CLN6-207ENST00000566347 PSG6Q00889 435 aa18.33■□□□□ 0.52
CLN6-207ENST00000566347 CYP27C1Q4G0S4 372 aa18.33■□□□□ 0.52
CLN6-207ENST00000566347 FLYWCH1Q4VC44 716 aa18.33■□□□□ 0.52
CLN6-207ENST00000566347 TMEM107Q6UX40 140 aa18.33■□□□□ 0.52
CLN6-207ENST00000566347 KIF18BQ86Y91 864 aa18.33■□□□□ 0.52
CLN6-207ENST00000566347 FAM222BQ8WU58 562 aa18.33■□□□□ 0.52
CLN6-207ENST00000566347 EFHD2Q96C19 240 aaPredicted RBP18.33■□□□□ 0.52
CLN6-207ENST00000566347 TM9SF2Q99805 663 aa18.33■□□□□ 0.52
CLN6-207ENST00000566347 DNAJB12Q9NXW2 375 aaKnown RBP18.33■□□□□ 0.52
CLN6-207ENST00000566347 CRIM1Q9NZV1 1036 aa18.33■□□□□ 0.52
CLN6-207ENST00000566347 DKKL1Q9UK85 242 aa18.33■□□□□ 0.52
CLN6-207ENST00000566347 KIAA1549Q9HCM3 1950 aa18.33■□□□□ 0.52
CLN6-207ENST00000566347 SLC28A1O00337 649 aa18.32■□□□□ 0.52
CLN6-207ENST00000566347 IFI6P09912 130 aa18.32■□□□□ 0.52
CLN6-207ENST00000566347 PRPH2P23942 346 aa18.32■□□□□ 0.52
CLN6-207ENST00000566347 DGKQP52824 942 aa18.32■□□□□ 0.52
CLN6-207ENST00000566347 SNTB1Q13884 538 aaKnown RBP18.32■□□□□ 0.52
CLN6-207ENST00000566347 PRSS53Q2L4Q9 553 aa18.32■□□□□ 0.52
CLN6-207ENST00000566347 HOMEZQ8IX15 550 aa18.32■□□□□ 0.52
CLN6-207ENST00000566347 OR2L13Q8N349 312 aa18.32■□□□□ 0.52
CLN6-207ENST00000566347 C9orf106Q8NAJ2 232 aa18.32■□□□□ 0.52
CLN6-207ENST00000566347 OR4N2Q8NGD1 307 aa18.32■□□□□ 0.52
CLN6-207ENST00000566347 EPS8L3Q8TE67 593 aaKnown RBP18.32■□□□□ 0.52
CLN6-207ENST00000566347 SFXN2Q96NB2 322 aa18.32■□□□□ 0.52
CLN6-207ENST00000566347 AMDHD1Q96NU7 426 aa18.32■□□□□ 0.52
CLN6-207ENST00000566347 UCN2Q96RP3 112 aa18.32■□□□□ 0.52
CLN6-207ENST00000566347 TUBA1CQ9BQE3 449 aa18.32■□□□□ 0.52
CLN6-207ENST00000566347 GLIPR2Q9H4G4 154 aa18.32■□□□□ 0.52
CLN6-207ENST00000566347 TNFRSF12AQ9NP84 129 aa18.32■□□□□ 0.52
CLN6-207ENST00000566347 DDX18Q9NVP1 670 aaKnown RBP18.32■□□□□ 0.52
CLN6-207ENST00000566347 FBXL2Q9UKC9 423 aa18.32■□□□□ 0.52
CLN6-207ENST00000566347 NPIPB8E9PQR5 432 aa18.31■□□□□ 0.52
CLN6-207ENST00000566347 RGS14O43566 566 aa18.31■□□□□ 0.52
CLN6-207ENST00000566347 SEC22BO75396 215 aa18.31■□□□□ 0.52
CLN6-207ENST00000566347 PSMG1O95456 288 aa18.31■□□□□ 0.52
CLN6-207ENST00000566347 TMIGD3P0DMS9 266 aaPredicted RBP18.31■□□□□ 0.52
CLN6-207ENST00000566347 CD1EP15812 388 aa18.31■□□□□ 0.52
CLN6-207ENST00000566347 CHMP24386 653 aa18.31■□□□□ 0.52
CLN6-207ENST00000566347 DNAJA1P31689 397 aaKnown RBP18.31■□□□□ 0.52
CLN6-207ENST00000566347 EVI2BP34910 448 aa18.31■□□□□ 0.52
CLN6-207ENST00000566347 GAS1P54826 345 aa18.31■□□□□ 0.52
CLN6-207ENST00000566347 SRYQ05066 204 aa18.31■□□□□ 0.52
CLN6-207ENST00000566347 SLC18A2Q05940 514 aa18.31■□□□□ 0.52
CLN6-207ENST00000566347 ZNHIT3Q15649 155 aaPredicted RBP18.31■□□□□ 0.52
CLN6-207ENST00000566347 DECR1Q16698 335 aa18.31■□□□□ 0.52
CLN6-207ENST00000566347 SH2D4BQ5SQS7 431 aa18.31■□□□□ 0.52
CLN6-207ENST00000566347 ADGRE4PQ86SQ3 457 aa18.31■□□□□ 0.52
CLN6-207ENST00000566347 OR4K17Q8NGC6 315 aa18.31■□□□□ 0.52
CLN6-207ENST00000566347 WNT2BQ93097 391 aa18.31■□□□□ 0.52
CLN6-207ENST00000566347 ELP4Q96EB1 424 aa18.31■□□□□ 0.52
CLN6-207ENST00000566347 TRMOQ9BU70 441 aa18.31■□□□□ 0.52
CLN6-207ENST00000566347 SFXN3Q9BWM7 321 aa18.31■□□□□ 0.52
CLN6-207ENST00000566347 POLDIP3Q9BY77 421 aaKnown RBP18.31■□□□□ 0.52
CLN6-207ENST00000566347 ACBD3Q9H3P7 528 aa18.31■□□□□ 0.52
CLN6-207ENST00000566347 Q9N2J8 555 aa18.31■□□□□ 0.52
CLN6-207ENST00000566347 SDHAF3Q9NRP4 125 aa18.31■□□□□ 0.52
CLN6-207ENST00000566347 C1orf109Q9NX04 203 aa18.31■□□□□ 0.52
CLN6-207ENST00000566347 PPP4R1LQ9P1A2 415 aa18.31■□□□□ 0.52
CLN6-207ENST00000566347 MRTO4Q9UKD2 239 aaKnown RBP18.31■□□□□ 0.52
CLN6-207ENST00000566347 CBLCQ9ULV8 474 aa18.31■□□□□ 0.52
CLN6-207ENST00000566347 ABCG2Q9UNQ0 655 aa18.31■□□□□ 0.52
CLN6-207ENST00000566347 CCL27Q9Y4X3 112 aa18.31■□□□□ 0.52
CLN6-207ENST00000566347 TTC36A6NLP5 189 aa18.3■□□□□ 0.52
CLN6-207ENST00000566347 EEF1E1-BLOC1S5C9J1V9 151 aa18.3■□□□□ 0.52
CLN6-207ENST00000566347 UPK1AO00322 258 aa18.3■□□□□ 0.52
CLN6-207ENST00000566347 EEF1E1O43324 174 aaKnown RBP18.3■□□□□ 0.52
CLN6-207ENST00000566347 RCBTB2O95199 551 aa18.3■□□□□ 0.52
CLN6-207ENST00000566347 NEFHP12036 1026 aa18.3■□□□□ 0.52
CLN6-207ENST00000566347 DPP4P27487 766 aa18.3■□□□□ 0.52
CLN6-207ENST00000566347 LHX2P50458 406 aa18.3■□□□□ 0.52
CLN6-207ENST00000566347 DSCR4P56555 118 aaPredicted RBP18.3■□□□□ 0.52
CLN6-207ENST00000566347 SORDQ00796 357 aa18.3■□□□□ 0.52
CLN6-207ENST00000566347 KIAA0040Q15053 153 aa18.3■□□□□ 0.52
CLN6-207ENST00000566347 CLEC6AQ6EIG7 209 aa18.3■□□□□ 0.52
CLN6-207ENST00000566347 OR5M10Q6IEU7 315 aa18.3■□□□□ 0.52
CLN6-207ENST00000566347 RNF165Q6ZSG1 346 aa18.3■□□□□ 0.52
CLN6-207ENST00000566347 C4orf33Q8N1A6 199 aa18.3■□□□□ 0.52
CLN6-207ENST00000566347 ZNF764Q96H86 408 aaPredicted RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms