RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 C12orf60Q5U649 245 aa1.19□□□□□ -2.22
SMG1-212ENST00000566328 FKBP1CQ5VVH2 108 aa1.19□□□□□ -2.22
SMG1-212ENST00000566328 KLHL10Q6JEL2 608 aa1.19□□□□□ -2.22
SMG1-212ENST00000566328 CWC27Q6UX04 472 aaKnown RBP1.19□□□□□ -2.22
SMG1-212ENST00000566328 GPR142Q7Z601 462 aa1.19□□□□□ -2.22
SMG1-212ENST00000566328 APCDD1Q8J025 514 aa1.19□□□□□ -2.22
SMG1-212ENST00000566328 ZNF444Q8N0Y2 327 aaPredicted RBP1.19□□□□□ -2.22
SMG1-212ENST00000566328 CADM2Q8N3J6 435 aa1.19□□□□□ -2.22
SMG1-212ENST00000566328 FBXW8Q8N3Y1 598 aa1.19□□□□□ -2.22
SMG1-212ENST00000566328 ICA1LQ8NDH6 482 aa1.19□□□□□ -2.22
SMG1-212ENST00000566328 ZNF397Q8NF99 534 aaPredicted RBP1.19□□□□□ -2.22
SMG1-212ENST00000566328 OR1K1Q8NGR3 316 aa1.19□□□□□ -2.22
SMG1-212ENST00000566328 ERO1AQ96HE7 468 aa1.19□□□□□ -2.22
SMG1-212ENST00000566328 PIWIL1Q96J94 861 aaKnown RBP1.19□□□□□ -2.22
SMG1-212ENST00000566328 LINC00615Q96LM1 132 aaPredicted RBP1.19□□□□□ -2.22
SMG1-212ENST00000566328 TCEANC2Q96MN5 208 aa1.19□□□□□ -2.22
SMG1-212ENST00000566328 LRRC2Q9BYS8 371 aa1.19□□□□□ -2.22
SMG1-212ENST00000566328 CCSER1Q9C0I3 900 aa1.19□□□□□ -2.22
SMG1-212ENST00000566328 TRPV6Q9H1D0 765 aa1.19□□□□□ -2.22
SMG1-212ENST00000566328 ZHX3Q9H4I2 956 aa1.19□□□□□ -2.22
SMG1-212ENST00000566328 EHD1Q9H4M9 534 aa1.19□□□□□ -2.22
SMG1-212ENST00000566328 MIEF1Q9NQG6 463 aa1.19□□□□□ -2.22
SMG1-212ENST00000566328 EIF3KQ9UBQ5 218 aaKnown RBP1.19□□□□□ -2.22
SMG1-212ENST00000566328 SEC14L4Q9UDX3 406 aa1.19□□□□□ -2.22
SMG1-212ENST00000566328 TBC1D29Q9UFV1 150 aa1.19□□□□□ -2.22
SMG1-212ENST00000566328 CHORDC1Q9UHD1 332 aaPredicted RBP1.19□□□□□ -2.22
SMG1-212ENST00000566328 ISY1Q9ULR0 285 aaKnown RBP1.19□□□□□ -2.22
SMG1-212ENST00000566328 PCDHGB4Q9UN71 923 aa1.19□□□□□ -2.22
SMG1-212ENST00000566328 PCDHGA1Q9Y5H4 931 aa1.19□□□□□ -2.22
SMG1-212ENST00000566328 MCM3APO60318 1980 aa1.19□□□□□ -2.22
SMG1-212ENST00000566328 PHIPQ8WWQ0 1821 aa1.19□□□□□ -2.22
SMG1-212ENST00000566328 MYO10Q9HD67 2058 aa1.19□□□□□ -2.22
SMG1-212ENST00000566328 TRANK1O15050 2925 aa1.19□□□□□ -2.22
SMG1-212ENST00000566328 MYH7BA7E2Y1 1941 aa1.19□□□□□ -2.22
SMG1-212ENST00000566328 MYH1P12882 1939 aa1.19□□□□□ -2.22
SMG1-212ENST00000566328 ASPMQ8IZT6 3477 aa1.19□□□□□ -2.22
SMG1-212ENST00000566328 FBN1P35555 2871 aaKnown RBP1.18□□□□□ -2.22
SMG1-212ENST00000566328 ZFHX4Q86UP3 3567 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 PFASO15067 1338 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 GRIN2DO15399 1336 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 ZBED9Q6R2W3 1325 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 MGAMO43451 1857 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 TET1Q8NFU7 2136 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 PSME4Q14997 1843 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 A0A0D9SFI3 127 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 A0A1B0GUA9 196 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 C19orf81C9J6K1 198 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 PSMD3O43242 534 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 RTN2O75298 545 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 OR6A2O95222 327 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 NDUFB10O96000 172 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 SP9P0CG40 484 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 TSPY3P0CV98 308 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 TSPY8P0CW00 308 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 SPP1P10451 314 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 HSPD1P10809 573 aaKnown RBP1.18□□□□□ -2.22
SMG1-212ENST00000566328 ACP1P24666 158 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 CCNE1P24864 410 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 HOXD10P28358 340 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 MC5RP33032 325 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 ZNF131P52739 623 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 CCL23P55773 120 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 IRX3P78415 501 aaPredicted RBP1.18□□□□□ -2.22
SMG1-212ENST00000566328 NUCB1Q02818 461 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 CETN1Q12798 172 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 MSLNQ13421 630 aaPredicted RBP1.18□□□□□ -2.22
SMG1-212ENST00000566328 GPNMBQ14956 572 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 USH1GQ495M9 461 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 C9orf152Q5JTZ5 239 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 HYIQ5T013 277 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 SPOUT1Q5T280 376 aaKnown RBP1.18□□□□□ -2.22
SMG1-212ENST00000566328 KPRPQ5T749 579 aaPredicted RBP1.18□□□□□ -2.22
SMG1-212ENST00000566328 SNRNP48Q6IEG0 339 aaKnown RBP1.18□□□□□ -2.22
SMG1-212ENST00000566328 CXCL17Q6UXB2 119 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 DEFB128Q7Z7B8 93 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 PHLDB2Q86SQ0 1253 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 LRP11Q86VZ4 500 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 CACUL1Q86Y37 369 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 DEFB123Q8N688 67 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 GVQW1Q8N7I0 195 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 RNF149Q8NC42 400 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 CRYGNQ8WXF5 182 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 SKA1Q96BD8 255 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 SNRNP40Q96DI7 357 aaKnown RBP1.18□□□□□ -2.22
SMG1-212ENST00000566328 ZNF558Q96NG5 402 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 TAAR1Q96RJ0 339 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 PARK7Q99497 189 aaKnown RBP1.18□□□□□ -2.22
SMG1-212ENST00000566328 CRNKL1Q9BZJ0 848 aaKnown RBP1.18□□□□□ -2.22
SMG1-212ENST00000566328 WWP1Q9H0M0 922 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 GLT8D2Q9H1C3 349 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 VCXQ9H320 206 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 RNF41Q9H4P4 317 aaPredicted RBP1.18□□□□□ -2.22
SMG1-212ENST00000566328 C11orf49Q9H6J7 331 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 IL1RL2Q9HB29 575 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 WFDC1Q9HC57 220 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 HOXC10Q9NYD6 342 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 DDX19BQ9UMR2 479 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 STX8Q9UNK0 236 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 PSG11Q9UQ72 335 aa1.18□□□□□ -2.22
SMG1-212ENST00000566328 PDE10AQ9Y233 779 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms