RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 FOLH1BQ9HBA9 442 aa7.77□□□□□ -1.17
CAPN3-213ENST00000565173 SLC35C2Q9NQQ7 365 aa7.77□□□□□ -1.17
CAPN3-213ENST00000565173 WIF1Q9Y5W5 379 aa7.77□□□□□ -1.17
CAPN3-213ENST00000565173 MED12LQ86YW9 2145 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 NAV3Q8IVL0 2385 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 ANK3Q12955 4377 aaKnown RBP7.76□□□□□ -1.17
CAPN3-213ENST00000565173 A0A1W2PNV4 684 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 SERTM1A2A2V5 107 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 SH3D21A4FU49 640 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 H0YC42 278 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 SIAH2O43255 324 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 PCDH7O60245 1069 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 ULK1O75385 1050 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 SUPT7LO94864 414 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 KRT6AP02538 564 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 KRT6BP04259 564 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 GRK2P25098 689 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 GCKP35557 465 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 KRT6CP48668 564 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 PCYT1AP49585 367 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 HTR6P50406 440 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 PRKAA2P54646 552 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 TPD52P55327 224 aaPredicted RBP7.76□□□□□ -1.17
CAPN3-213ENST00000565173 EEF1A1P68104 462 aaKnown RBP7.76□□□□□ -1.17
CAPN3-213ENST00000565173 PSG6Q00889 435 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 FAM27E3Q08E93 113 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 GAB1Q13480 694 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 KEAP1Q14145 624 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 EFR3AQ14156 821 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 HEPACAMQ14CZ8 416 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 POU4F3Q15319 338 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 TEX35Q5T0J7 233 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 EEF1A1P5Q5VTE0 462 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 FBXW10Q5XX13 1052 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 GPRIN3Q6ZVF9 776 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 LARP4Q71RC2 724 aaKnown RBP eCLIP7.76□□□□□ -1.17
CAPN3-213ENST00000565173 TAOK1Q7L7X3 1001 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 SLC44A2Q8IWA5 706 aaPredicted RBP7.76□□□□□ -1.17
CAPN3-213ENST00000565173 SAMD14Q8IZD0 417 aaPredicted RBP7.76□□□□□ -1.17
CAPN3-213ENST00000565173 GBP7Q8N8V2 638 aaPredicted RBP7.76□□□□□ -1.17
CAPN3-213ENST00000565173 METTL6Q8TCB7 284 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 SMPDL3BQ92485 455 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 EXOSC8Q96B26 276 aaKnown RBP7.76□□□□□ -1.17
CAPN3-213ENST00000565173 EFHD2Q96C19 240 aaPredicted RBP7.76□□□□□ -1.17
CAPN3-213ENST00000565173 MTBPQ96DY7 904 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 SFXN2Q96NB2 322 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 KCNA7Q96RP8 456 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 SMR3AQ99954 134 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 YIPF4Q9BSR8 244 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 RTN4RQ9BZR6 473 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 PIGMQ9H3S5 423 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 SIRT5Q9NXA8 310 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 FLRT3Q9NZU0 649 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 PACSIN3Q9UKS6 424 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 TIMM22Q9Y584 194 aa7.76□□□□□ -1.17
CAPN3-213ENST00000565173 A0A087WUV0 522 aaPredicted RBP7.75□□□□□ -1.17
CAPN3-213ENST00000565173 A0A087WV62 115 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 GNG14A0A1W2PPG7 69 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 DEFB108AA8MXU0 73 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 MYO1GB0I1T2 1018 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 ESPNB1AK53 854 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 UBFD1O14562 309 aaKnown RBP7.75□□□□□ -1.17
CAPN3-213ENST00000565173 MSTNO14793 375 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 FADS1O60427 444 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 PSMG1O95456 288 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 ESRRBO95718 433 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 CGAP01215 116 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 CRHP06850 196 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 TAC1P20366 129 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 DDCP20711 480 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 TCEA1P23193 301 aaKnown RBP7.75□□□□□ -1.17
CAPN3-213ENST00000565173 ATP5F1P24539 256 aaPredicted RBP7.75□□□□□ -1.17
CAPN3-213ENST00000565173 DPP4P27487 766 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 IL12BP29460 328 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 TIA1P31483 386 aaKnown RBP eCLIP7.75□□□□□ -1.17
CAPN3-213ENST00000565173 EVI2BP34910 448 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 MPIP34949 423 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 KIR2DL2P43627 348 aaPredicted RBP7.75□□□□□ -1.17
CAPN3-213ENST00000565173 SUCLG1P53597 346 aaKnown RBP7.75□□□□□ -1.17
CAPN3-213ENST00000565173 FOXA1P55317 472 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 DSCR4P56555 118 aaPredicted RBP7.75□□□□□ -1.17
CAPN3-213ENST00000565173 PSPHP78330 225 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 BTKQ06187 659 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 ACSM2AQ08AH3 577 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 ERCC6LQ2NKX8 1250 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 SPIN4Q56A73 249 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 ACSM2BQ68CK6 577 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 ZNF474Q6S9Z5 364 aaPredicted RBP7.75□□□□□ -1.17
CAPN3-213ENST00000565173 SCIMPQ6UWF3 145 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 C22orf34Q6ZV56 151 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 BTLAQ7Z6A9 289 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 LCA5Q86VQ0 697 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 GRAMD2AQ8IUY3 354 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 MNS1Q8NEH6 495 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 OR2M3Q8NG83 312 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 L3HYPDHQ96EM0 354 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 MARK4Q96L34 752 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 WFIKKN1Q96NZ8 548 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 EBPLQ9BY08 206 aa7.75□□□□□ -1.17
CAPN3-213ENST00000565173 STMN4Q9H169 189 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms