RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 CEBPEQ15744 281 aa16.84■□□□□ 0.29
CLN6-204ENST00000564752 FLYWCH1Q4VC44 716 aa16.84■□□□□ 0.29
CLN6-204ENST00000564752 FAM71E1Q6IPT2 247 aa16.84■□□□□ 0.29
CLN6-204ENST00000564752 NOXRED1Q6NXP6 359 aa16.84■□□□□ 0.29
CLN6-204ENST00000564752 ANGPTL8Q6UXH0 198 aa16.84■□□□□ 0.29
CLN6-204ENST00000564752 IKBIPQ70UQ0 350 aa16.84■□□□□ 0.29
CLN6-204ENST00000564752 MBD3L2Q8NHZ7 208 aaPredicted RBP16.84■□□□□ 0.29
CLN6-204ENST00000564752 TCP10LQ8TDR4 215 aa16.84■□□□□ 0.29
CLN6-204ENST00000564752 METTL2AQ96IZ6 378 aaKnown RBP16.84■□□□□ 0.29
CLN6-204ENST00000564752 TRIB1Q96RU8 372 aa16.84■□□□□ 0.29
CLN6-204ENST00000564752 MECRQ9BV79 373 aa16.84■□□□□ 0.29
CLN6-204ENST00000564752 ANKRA2Q9H9E1 313 aa16.84■□□□□ 0.29
CLN6-204ENST00000564752 ST6GALNAC2Q9UJ37 374 aa16.84■□□□□ 0.29
CLN6-204ENST00000564752 FREM3P0C091 2139 aa16.84■□□□□ 0.29
CLN6-204ENST00000564752 A6NNC1 897 aa16.83■□□□□ 0.28
CLN6-204ENST00000564752 SNPHO15079 494 aa16.83■□□□□ 0.28
CLN6-204ENST00000564752 TO15178 435 aa16.83■□□□□ 0.28
CLN6-204ENST00000564752 NPHS1O60500 1241 aa16.83■□□□□ 0.28
CLN6-204ENST00000564752 SEC22BO75396 215 aa16.83■□□□□ 0.28
CLN6-204ENST00000564752 ACTL6AO96019 429 aa16.83■□□□□ 0.28
CLN6-204ENST00000564752 PRPH2P23942 346 aa16.83■□□□□ 0.28
CLN6-204ENST00000564752 CTSSP25774 331 aa16.83■□□□□ 0.28
CLN6-204ENST00000564752 NTSP30990 170 aa16.83■□□□□ 0.28
CLN6-204ENST00000564752 PPICP45877 212 aa16.83■□□□□ 0.28
CLN6-204ENST00000564752 NCBP2P52298 156 aaKnown RBP eCLIP16.83■□□□□ 0.28
CLN6-204ENST00000564752 DAZAP2Q15038 168 aaPredicted RBP16.83■□□□□ 0.28
CLN6-204ENST00000564752 YRDCQ86U90 279 aaKnown RBP16.83■□□□□ 0.28
CLN6-204ENST00000564752 MREGQ8N565 214 aa16.83■□□□□ 0.28
CLN6-204ENST00000564752 ZPLD1Q8TCW7 415 aa16.83■□□□□ 0.28
CLN6-204ENST00000564752 TMUB1Q9BVT8 246 aa16.83■□□□□ 0.28
CLN6-204ENST00000564752 OSBPL11Q9BXB4 747 aa16.83■□□□□ 0.28
CLN6-204ENST00000564752 STMN4Q9H169 189 aaPredicted RBP16.83■□□□□ 0.28
CLN6-204ENST00000564752 LRTM1Q9HBL6 345 aa16.83■□□□□ 0.28
CLN6-204ENST00000564752 GALNT9Q9HCQ5 603 aa16.83■□□□□ 0.28
CLN6-204ENST00000564752 C1orf109Q9NX04 203 aa16.83■□□□□ 0.28
CLN6-204ENST00000564752 EXO1Q9UQ84 846 aaKnown RBP16.83■□□□□ 0.28
CLN6-204ENST00000564752 WBP11Q9Y2W2 641 aaKnown RBP16.83■□□□□ 0.28
CLN6-204ENST00000564752 CCL27Q9Y4X3 112 aa16.83■□□□□ 0.28
CLN6-204ENST00000564752 ARHGAP21Q5T5U3 1957 aa16.82■□□□□ 0.28
CLN6-204ENST00000564752 C2orf72A6NCS6 295 aa16.82■□□□□ 0.28
CLN6-204ENST00000564752 UGT2B11O75310 529 aa16.82■□□□□ 0.28
CLN6-204ENST00000564752 CBR3O75828 277 aa16.82■□□□□ 0.28
CLN6-204ENST00000564752 JUNP05412 331 aaKnown RBP16.82■□□□□ 0.28
CLN6-204ENST00000564752 CHRNGP07510 517 aa16.82■□□□□ 0.28
CLN6-204ENST00000564752 CPN1P15169 458 aa16.82■□□□□ 0.28
CLN6-204ENST00000564752 AGFG1P52594 562 aaKnown RBP16.82■□□□□ 0.28
CLN6-204ENST00000564752 KRTAP21-3Q3LHN1 58 aa16.82■□□□□ 0.28
CLN6-204ENST00000564752 KRT71Q3SY84 523 aa16.82■□□□□ 0.28
CLN6-204ENST00000564752 KANK2Q63ZY3 851 aa16.82■□□□□ 0.28
CLN6-204ENST00000564752 RNF165Q6ZSG1 346 aa16.82■□□□□ 0.28
CLN6-204ENST00000564752 CDC20BQ86Y33 519 aa16.82■□□□□ 0.28
CLN6-204ENST00000564752 HOMEZQ8IX15 550 aa16.82■□□□□ 0.28
CLN6-204ENST00000564752 WDSUB1Q8N9V3 476 aa16.82■□□□□ 0.28
CLN6-204ENST00000564752 OR7G2Q8NG99 324 aa16.82■□□□□ 0.28
CLN6-204ENST00000564752 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.82■□□□□ 0.28
CLN6-204ENST00000564752 RMND5BQ96G75 393 aaPredicted RBP16.82■□□□□ 0.28
CLN6-204ENST00000564752 BTBD9Q96Q07 612 aa16.82■□□□□ 0.28
CLN6-204ENST00000564752 PARD6BQ9BYG5 372 aa16.82■□□□□ 0.28
CLN6-204ENST00000564752 EML4Q9HC35 981 aaKnown RBP16.82■□□□□ 0.28
CLN6-204ENST00000564752 KLRF1Q9NZS2 232 aa16.82■□□□□ 0.28
CLN6-204ENST00000564752 JKAMPQ9P055 326 aa16.82■□□□□ 0.28
CLN6-204ENST00000564752 CBLCQ9ULV8 474 aa16.82■□□□□ 0.28
CLN6-204ENST00000564752 GPR55Q9Y2T6 319 aaPredicted RBP16.82■□□□□ 0.28
CLN6-204ENST00000564752 MYO1GB0I1T2 1018 aa16.81■□□□□ 0.28
CLN6-204ENST00000564752 ESPNB1AK53 854 aa16.81■□□□□ 0.28
CLN6-204ENST00000564752 NPIPB8E9PQR5 432 aa16.81■□□□□ 0.28
CLN6-204ENST00000564752 PLOD3O60568 738 aa16.81■□□□□ 0.28
CLN6-204ENST00000564752 COQ9O75208 318 aa16.81■□□□□ 0.28
CLN6-204ENST00000564752 ERN1O75460 977 aaKnown RBP16.81■□□□□ 0.28
CLN6-204ENST00000564752 SLITRK5O94991 958 aa16.81■□□□□ 0.28
CLN6-204ENST00000564752 IL18BPO95998 194 aa16.81■□□□□ 0.28
CLN6-204ENST00000564752 LINC00032P0C843 101 aa16.81■□□□□ 0.28
CLN6-204ENST00000564752 CD99P14209 185 aa16.81■□□□□ 0.28
CLN6-204ENST00000564752 OPRM1P35372 400 aa16.81■□□□□ 0.28
CLN6-204ENST00000564752 KRT20P35900 424 aa16.81■□□□□ 0.28
CLN6-204ENST00000564752 RPL38P63173 70 aaKnown RBP16.81■□□□□ 0.28
CLN6-204ENST00000564752 ZNF155Q12901 538 aaPredicted RBP16.81■□□□□ 0.28
CLN6-204ENST00000564752 RCAN2Q14206 197 aa16.81■□□□□ 0.28
CLN6-204ENST00000564752 KIAA0040Q15053 153 aa16.81■□□□□ 0.28
CLN6-204ENST00000564752 ARL13AQ5H913 290 aaPredicted RBP16.81■□□□□ 0.28
CLN6-204ENST00000564752 ZCCHC23Q6ZST2 131 aa16.81■□□□□ 0.28
CLN6-204ENST00000564752 KIF18BQ86Y91 864 aa16.81■□□□□ 0.28
CLN6-204ENST00000564752 DDIASQ8IXT1 998 aa16.81■□□□□ 0.28
CLN6-204ENST00000564752 C9orf106Q8NAJ2 232 aa16.81■□□□□ 0.28
CLN6-204ENST00000564752 OR2T11Q8NH01 316 aa16.81■□□□□ 0.28
CLN6-204ENST00000564752 GOT1L1Q8NHS2 421 aaPredicted RBP16.81■□□□□ 0.28
CLN6-204ENST00000564752 TWIST2Q8WVJ9 160 aa16.81■□□□□ 0.28
CLN6-204ENST00000564752 TMBIM1Q969X1 311 aa16.81■□□□□ 0.28
CLN6-204ENST00000564752 VSTM2LQ96N03 204 aa16.81■□□□□ 0.28
CLN6-204ENST00000564752 CCT7Q99832 543 aa16.81■□□□□ 0.28
CLN6-204ENST00000564752 TMEM109Q9BVC6 243 aa16.81■□□□□ 0.28
CLN6-204ENST00000564752 OR2B2Q9GZK3 357 aa16.81■□□□□ 0.28
CLN6-204ENST00000564752 FOLH1BQ9HBA9 442 aa16.81■□□□□ 0.28
CLN6-204ENST00000564752 SERHLQ9NQF3 203 aa16.81■□□□□ 0.28
CLN6-204ENST00000564752 TAS2R9Q9NYW1 312 aa16.81■□□□□ 0.28
CLN6-204ENST00000564752 TAS2R7Q9NYW3 318 aa16.81■□□□□ 0.28
CLN6-204ENST00000564752 EDARQ9UNE0 448 aa16.81■□□□□ 0.28
CLN6-204ENST00000564752 MAPRE3Q9UPY8 281 aa16.81■□□□□ 0.28
CLN6-204ENST00000564752 DNAJC15Q9Y5T4 150 aa16.81■□□□□ 0.28
CLN6-204ENST00000564752 ABCA4P78363 2273 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms