RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 GPC6Q9Y625 555 aaPredicted RBP6.96□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SCN2AQ99250 2005 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CCDC187A0A096LP49 1063 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 A0A0G2JPF8 293 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 IGHV5-10-1A0A0J9YXX1 117 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 C2orf72A6NCS6 295 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PRAMEF25A6NGN4 478 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ENO4A6NNW6 628 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 HNRNPCL2B2RXH8 293 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 HNRNPCL3B7ZW38 293 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 H3BSA7 217 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 FAAHO00519 579 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 FAM20BO75063 409 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 UGT2B17O75795 530 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 AGR2O95994 175 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 EIF2S1P05198 315 aaKnown RBP6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 HMGN2P05204 90 aaKnown RBP6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 H1F0P07305 194 aaKnown RBP6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 HNRNPCL4P0DMR1 293 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SMIM10L1P0DMW3 83 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 AGXTP21549 392 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CDH3P22223 829 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 GGT2P36268 569 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 POLR2IP36954 125 aaKnown RBP6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CAPZBP47756 277 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 LIMS1P48059 325 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SEPHS1P49903 392 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PDX1P52945 283 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 MAPK10P53779 464 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 LIM2P55344 173 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CXCR4P61073 352 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PPP1CAP62136 330 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SKP1P63208 163 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CSNK2BP67870 215 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ROR2Q01974 943 aaKnown RBP6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CFHR1Q03591 330 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 DUSP2Q05923 314 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CDK5R2Q13319 367 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 DYNC1I2Q13409 638 aaKnown RBP6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 TUBA3CQ13748 450 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 GANABQ14697 944 aaKnown RBP6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 RAB39AQ14964 217 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 MAD2L1BPQ15013 274 aaPredicted RBP6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SYPL1Q16563 259 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CYP27C1Q4G0S4 372 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 GPAT3Q53EU6 434 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 FGD3Q5JSP0 725 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 COLEC12Q5KU26 742 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 TMEM71Q6P5X7 295 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 C16orf62Q7Z3J2 963 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ZNF605Q86T29 641 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 TSPYL5Q86VY4 417 aaPredicted RBP6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PLXDC1Q8IUK5 500 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 DEPDC4Q8N2C3 294 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SVOPQ8N4V2 548 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SLC5A8Q8N695 610 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 BPIFB6Q8NFQ5 453 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 GPR32P1Q8NGA4 272 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 OR4D9Q8NGE8 314 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 OR5D16Q8NGK9 328 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 OR9A2Q8NGT5 310 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 OR52J3Q8NH60 311 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 VANGL1Q8TAA9 524 aaPredicted RBP6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ZNF420Q8TAQ5 688 aaPredicted RBP6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CNIH3Q8TBE1 160 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 APOBEC4Q8WW27 367 aaKnown RBP6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 KLHL6Q8WZ60 621 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 NR4A3Q92570 626 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 TMIGD2Q96BF3 282 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ELP4Q96EB1 424 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SMIM10Q96HG1 83 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 MPP4Q96JB8 637 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 HRASLS5Q96KN8 279 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ZNF354BQ96LW1 612 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 C10orf90Q96M02 699 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ZNF681Q96N22 645 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 OR7D2Q96RA2 312 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 FEVQ99581 238 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 DPYSL5Q9BPU6 564 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 TREX2Q9BQ50 279 aaPredicted RBP6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ACTRT3Q9BYD9 372 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 CXorf21Q9HAI6 301 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 FANCEQ9HB96 536 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 BCL2L10Q9HD36 194 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 EQTNQ9NQ60 294 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 AKAP7Q9P0M2 348 aaPredicted RBP6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PISDQ9UG56 409 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SLC13A4Q9UKG4 626 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 DAPP1Q9UN19 280 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SATB2Q9UPW6 733 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 LIPT1Q9Y234 373 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 MSRB2Q9Y3D2 182 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SLC22A7Q9Y694 548 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PTPN13Q12923 2485 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 ACACAQ13085 2346 aa6.95□□□□□ -1.3
MAP1LC3B-205ENST00000564638 APC2O95996 2303 aa6.94□□□□□ -1.3
MAP1LC3B-205ENST00000564638 SPTBP11277 2137 aa6.94□□□□□ -1.3
MAP1LC3B-205ENST00000564638 LOC105369274A0A096LPK9 316 aa6.94□□□□□ -1.3
MAP1LC3B-205ENST00000564638 LOC102723532A0A0G2JNH3 316 aa6.94□□□□□ -1.3
MAP1LC3B-205ENST00000564638 PMS2P1A4D2B8 440 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms