RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 SDC1P18827 310 aa3.06□□□□□ -1.92
UBR1-205ENST00000564540 MUTP22033 750 aa3.06□□□□□ -1.92
UBR1-205ENST00000564540 KIAA1024LP59773 190 aa3.06□□□□□ -1.92
UBR1-205ENST00000564540 SMU1Q2TAY7 513 aa3.06□□□□□ -1.92
UBR1-205ENST00000564540 ZNF699Q32M78 642 aa3.06□□□□□ -1.92
UBR1-205ENST00000564540 ZNF528Q3MIS6 628 aa3.06□□□□□ -1.92
UBR1-205ENST00000564540 CMPK2Q5EBM0 449 aa3.06□□□□□ -1.92
UBR1-205ENST00000564540 SPATA46Q5T0L3 261 aa3.06□□□□□ -1.92
UBR1-205ENST00000564540 DPY19L2P2Q6ZN68 376 aa3.06□□□□□ -1.92
UBR1-205ENST00000564540 RANBP3LQ86VV4 465 aaPredicted RBP3.06□□□□□ -1.92
UBR1-205ENST00000564540 ZSCAN30Q86W11 494 aa3.06□□□□□ -1.92
UBR1-205ENST00000564540 ENTHD1Q8IYW4 607 aa3.06□□□□□ -1.92
UBR1-205ENST00000564540 ADAMTS16Q8TE57 1224 aa3.06□□□□□ -1.92
UBR1-205ENST00000564540 MARC2Q969Z3 335 aa3.06□□□□□ -1.92
UBR1-205ENST00000564540 TRPV6Q9H1D0 765 aa3.06□□□□□ -1.92
UBR1-205ENST00000564540 CARD9Q9H257 536 aa3.06□□□□□ -1.92
UBR1-205ENST00000564540 Q9H3A6 140 aa3.06□□□□□ -1.92
UBR1-205ENST00000564540 NDUFA13Q9P0J0 144 aa3.06□□□□□ -1.92
UBR1-205ENST00000564540 COPS7AQ9UBW8 275 aa3.06□□□□□ -1.92
UBR1-205ENST00000564540 ZNF221Q9UK13 617 aa3.06□□□□□ -1.92
UBR1-205ENST00000564540 TRBV7-9A0A0J9YWB2 115 aa3.05□□□□□ -1.92
UBR1-205ENST00000564540 A0A1W2PRV1 198 aa3.05□□□□□ -1.92
UBR1-205ENST00000564540 H3BMH7 237 aa3.05□□□□□ -1.92
UBR1-205ENST00000564540 WWP2O00308 870 aa3.05□□□□□ -1.92
UBR1-205ENST00000564540 ZNF254O75437 659 aa3.05□□□□□ -1.92
UBR1-205ENST00000564540 AREGP15514 252 aa3.05□□□□□ -1.92
UBR1-205ENST00000564540 CCL11P51671 97 aa3.05□□□□□ -1.92
UBR1-205ENST00000564540 CCZ1BP86790 482 aa3.05□□□□□ -1.92
UBR1-205ENST00000564540 CCZ1P86791 482 aaPredicted RBP3.05□□□□□ -1.92
UBR1-205ENST00000564540 GALK2Q01415 458 aa3.05□□□□□ -1.92
UBR1-205ENST00000564540 MECOMQ03112 1051 aa3.05□□□□□ -1.92
UBR1-205ENST00000564540 CAMK4Q16566 473 aa3.05□□□□□ -1.92
UBR1-205ENST00000564540 CCDC92Q53HC0 331 aaPredicted RBP3.05□□□□□ -1.92
UBR1-205ENST00000564540 MEDAGQ5VYS4 303 aa3.05□□□□□ -1.92
UBR1-205ENST00000564540 ZNF57Q68EA5 555 aaPredicted RBP3.05□□□□□ -1.92
UBR1-205ENST00000564540 MKXQ8IYA7 352 aa3.05□□□□□ -1.92
UBR1-205ENST00000564540 SFRP1Q8N474 314 aa3.05□□□□□ -1.92
UBR1-205ENST00000564540 RNF175Q8N4F7 328 aa3.05□□□□□ -1.92
UBR1-205ENST00000564540 TMCO5AQ8N6Q1 288 aa3.05□□□□□ -1.92
UBR1-205ENST00000564540 OR10H4Q8NGA5 316 aa3.05□□□□□ -1.92
UBR1-205ENST00000564540 TMEM45BQ96B21 275 aa3.05□□□□□ -1.92
UBR1-205ENST00000564540 VMP1Q96GC9 406 aa3.05□□□□□ -1.92
UBR1-205ENST00000564540 HPS4Q9NQG7 708 aa3.05□□□□□ -1.92
UBR1-205ENST00000564540 ELOVL2Q9NXB9 296 aa3.05□□□□□ -1.92
UBR1-205ENST00000564540 CYP11B1P15538 503 aa3.04□□□□□ -1.92
UBR1-205ENST00000564540 MARCKSP29966 332 aaPredicted RBP3.04□□□□□ -1.92
UBR1-205ENST00000564540 RFC2P35250 354 aa3.04□□□□□ -1.92
UBR1-205ENST00000564540 RBMXP38159 391 aaKnown RBP3.04□□□□□ -1.92
UBR1-205ENST00000564540 STK19P49842 368 aaPredicted RBP3.04□□□□□ -1.92
UBR1-205ENST00000564540 SLC26A2P50443 739 aa3.04□□□□□ -1.92
UBR1-205ENST00000564540 CNN1P51911 297 aaKnown RBP3.04□□□□□ -1.92
UBR1-205ENST00000564540 NOP14P78316 857 aaKnown RBP3.04□□□□□ -1.92
UBR1-205ENST00000564540 C17orf67Q0P5P2 114 aa3.04□□□□□ -1.92
UBR1-205ENST00000564540 ZNF674Q2M3X9 581 aa3.04□□□□□ -1.92
UBR1-205ENST00000564540 CCDC14Q49A88 953 aa3.04□□□□□ -1.92
UBR1-205ENST00000564540 PNCKQ6P2M8 343 aa3.04□□□□□ -1.92
UBR1-205ENST00000564540 Q6P435 159 aa3.04□□□□□ -1.92
UBR1-205ENST00000564540 PLBD1Q6P4A8 553 aa3.04□□□□□ -1.92
UBR1-205ENST00000564540 TRPM8Q7Z2W7 1104 aa3.04□□□□□ -1.92
UBR1-205ENST00000564540 TMEM179BQ7Z7N9 219 aa3.04□□□□□ -1.92
UBR1-205ENST00000564540 PTP4A1Q93096 173 aa3.04□□□□□ -1.92
UBR1-205ENST00000564540 C18orf25Q96B23 403 aaPredicted RBP3.04□□□□□ -1.92
UBR1-205ENST00000564540 CCSER1Q9C0I3 900 aa3.04□□□□□ -1.92
UBR1-205ENST00000564540 TMEM245Q9H330 911 aa3.04□□□□□ -1.92
UBR1-205ENST00000564540 CWC25Q9NXE8 425 aaPredicted RBP3.04□□□□□ -1.92
UBR1-205ENST00000564540 MBD2Q9UBB5 411 aa3.04□□□□□ -1.92
UBR1-205ENST00000564540 LHX3Q9UBR4 397 aa3.04□□□□□ -1.92
UBR1-205ENST00000564540 DHRS7Q9Y394 339 aa3.04□□□□□ -1.92
UBR1-205ENST00000564540 CDC42BPBQ9Y5S2 1711 aa3.04□□□□□ -1.92
UBR1-205ENST00000564540 NPIPA2E9PIF3 369 aa3.03□□□□□ -1.92
UBR1-205ENST00000564540 TLR4O00206 839 aa3.03□□□□□ -1.92
UBR1-205ENST00000564540 NME2P1O60361 137 aa3.03□□□□□ -1.92
UBR1-205ENST00000564540 FMO6PO60774 539 aa3.03□□□□□ -1.92
UBR1-205ENST00000564540 TOXO94900 526 aa3.03□□□□□ -1.92
UBR1-205ENST00000564540 PGK2P07205 417 aa3.03□□□□□ -1.92
UBR1-205ENST00000564540 ATP5DP30049 168 aa3.03□□□□□ -1.92
UBR1-205ENST00000564540 NF2P35240 595 aa3.03□□□□□ -1.92
UBR1-205ENST00000564540 CAV2P51636 162 aa3.03□□□□□ -1.92
UBR1-205ENST00000564540 BCL2L1Q07817 233 aa3.03□□□□□ -1.92
UBR1-205ENST00000564540 TEFQ10587 303 aa3.03□□□□□ -1.92
UBR1-205ENST00000564540 RAB35Q15286 201 aa3.03□□□□□ -1.92
UBR1-205ENST00000564540 ZCCHC12Q6PEW1 402 aa3.03□□□□□ -1.92
UBR1-205ENST00000564540 ZNF410Q86VK4 478 aa3.03□□□□□ -1.92
UBR1-205ENST00000564540 PARGQ86W56 976 aa3.03□□□□□ -1.92
UBR1-205ENST00000564540 CCDC170Q8IYT3 715 aa3.03□□□□□ -1.92
UBR1-205ENST00000564540 CSNK1A1LQ8N752 337 aa3.03□□□□□ -1.92
UBR1-205ENST00000564540 Q8N9L7 120 aa3.03□□□□□ -1.92
UBR1-205ENST00000564540 TSPAN18Q96SJ8 248 aa3.03□□□□□ -1.92
UBR1-205ENST00000564540 FAM114A2Q9NRY5 505 aa3.03□□□□□ -1.92
UBR1-205ENST00000564540 TRIM49D1C9J1S8 452 aa3.02□□□□□ -1.93
UBR1-205ENST00000564540 CXCL14O95715 111 aa3.02□□□□□ -1.93
UBR1-205ENST00000564540 CALRP27797 417 aaKnown RBP3.02□□□□□ -1.93
UBR1-205ENST00000564540 TMOD1P28289 359 aa3.02□□□□□ -1.93
UBR1-205ENST00000564540 GPC3P51654 580 aa3.02□□□□□ -1.93
UBR1-205ENST00000564540 RPS6P62753 249 aaKnown RBP3.02□□□□□ -1.93
UBR1-205ENST00000564540 PPP2R5CQ13362 524 aa3.02□□□□□ -1.93
UBR1-205ENST00000564540 BTG3Q14201 252 aaPredicted RBP3.02□□□□□ -1.93
UBR1-205ENST00000564540 LIPKQ5VXJ0 399 aa3.02□□□□□ -1.93
UBR1-205ENST00000564540 IYDQ6PHW0 289 aa3.02□□□□□ -1.93
UBR1-205ENST00000564540 AMZ2Q86W34 360 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms