RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-210	ENST00000564409	NTS	P30990	170 aa		13.64	□□□□□ -0.23
SPG7-210	ENST00000564409	CRHR1	P34998	444 aa		13.64	□□□□□ -0.23
SPG7-210	ENST00000564409	GFRA1	P56159	465 aa		13.64	□□□□□ -0.23
SPG7-210	ENST00000564409	BTK	Q06187	659 aa		13.64	□□□□□ -0.23
SPG7-210	ENST00000564409	C2orf80	Q0P641	193 aa		13.64	□□□□□ -0.23
SPG7-210	ENST00000564409	GAB1	Q13480	694 aa		13.64	□□□□□ -0.23
SPG7-210	ENST00000564409	BCL2A1	Q16548	175 aa		13.64	□□□□□ -0.23
SPG7-210	ENST00000564409	FAM153C	Q494X1	144 aa		13.64	□□□□□ -0.23
SPG7-210	ENST00000564409	DCST1	Q5T197	706 aa		13.64	□□□□□ -0.23
SPG7-210	ENST00000564409	FAM71E1	Q6IPT2	247 aa		13.64	□□□□□ -0.23
SPG7-210	ENST00000564409	SH2D5	Q6ZV89	423 aa		13.64	□□□□□ -0.23
SPG7-210	ENST00000564409	SLC44A2	Q8IWA5	706 aa	Predicted RBP	13.64	□□□□□ -0.23
SPG7-210	ENST00000564409	TRIM42	Q8IWZ5	723 aa		13.64	□□□□□ -0.23
SPG7-210	ENST00000564409	OR7G2	Q8NG99	324 aa		13.64	□□□□□ -0.23
SPG7-210	ENST00000564409	WNT2B	Q93097	391 aa		13.64	□□□□□ -0.23
SPG7-210	ENST00000564409	RHOXF2	Q9BQY4	288 aa		13.64	□□□□□ -0.23
SPG7-210	ENST00000564409	SFXN3	Q9BWM7	321 aa		13.64	□□□□□ -0.23
SPG7-210	ENST00000564409	HHATL	Q9HCP6	504 aa		13.64	□□□□□ -0.23
SPG7-210	ENST00000564409	CRIM1	Q9NZV1	1036 aa		13.64	□□□□□ -0.23
SPG7-210	ENST00000564409	JKAMP	Q9P055	326 aa		13.64	□□□□□ -0.23
SPG7-210	ENST00000564409	MID2	Q9UJV3	735 aa		13.64	□□□□□ -0.23
SPG7-210	ENST00000564409	MRTO4	Q9UKD2	239 aa	Known RBP	13.64	□□□□□ -0.23
SPG7-210	ENST00000564409	EMCN	Q9ULC0	261 aa		13.64	□□□□□ -0.23
SPG7-210	ENST00000564409	ABCG2	Q9UNQ0	655 aa		13.64	□□□□□ -0.23
SPG7-210	ENST00000564409	C19orf53	Q9UNZ5	99 aa	Predicted RBP	13.64	□□□□□ -0.23
SPG7-210	ENST00000564409	OR10H1	Q9Y4A9	318 aa		13.64	□□□□□ -0.23
SPG7-210	ENST00000564409	CELSR1	Q9NYQ6	3014 aa		13.64	□□□□□ -0.23
SPG7-210	ENST00000564409	C2orf72	A6NCS6	295 aa		13.63	□□□□□ -0.23
SPG7-210	ENST00000564409	TUBAL3	A6NHL2	446 aa		13.63	□□□□□ -0.23
SPG7-210	ENST00000564409		A6NNC1	897 aa		13.63	□□□□□ -0.23
SPG7-210	ENST00000564409	NPIPB8	E9PQR5	432 aa		13.63	□□□□□ -0.23
SPG7-210	ENST00000564409	LINC01387	J3KSC0	135 aa		13.63	□□□□□ -0.23
SPG7-210	ENST00000564409	UBFD1	O14562	309 aa	Known RBP	13.63	□□□□□ -0.23
SPG7-210	ENST00000564409	RCBTB2	O95199	551 aa		13.63	□□□□□ -0.23
SPG7-210	ENST00000564409	TMIGD3	P0DMS9	266 aa	Predicted RBP	13.63	□□□□□ -0.23
SPG7-210	ENST00000564409	UROS	P10746	265 aa		13.63	□□□□□ -0.23
SPG7-210	ENST00000564409	EPX	P11678	715 aa		13.63	□□□□□ -0.23
SPG7-210	ENST00000564409	PRPH2	P23942	346 aa		13.63	□□□□□ -0.23
SPG7-210	ENST00000564409	GRK2	P25098	689 aa		13.63	□□□□□ -0.23
SPG7-210	ENST00000564409	ART1	P52961	327 aa		13.63	□□□□□ -0.23
SPG7-210	ENST00000564409	CORO7	P57737	925 aa		13.63	□□□□□ -0.23
SPG7-210	ENST00000564409	GANAB	Q14697	944 aa	Known RBP	13.63	□□□□□ -0.23
SPG7-210	ENST00000564409	ZNHIT3	Q15649	155 aa	Predicted RBP	13.63	□□□□□ -0.23
SPG7-210	ENST00000564409	DESI1	Q6ICB0	168 aa		13.63	□□□□□ -0.23
SPG7-210	ENST00000564409	NPSR1	Q6W5P4	371 aa		13.63	□□□□□ -0.23
SPG7-210	ENST00000564409	GOT1L1	Q8NHS2	421 aa	Predicted RBP	13.63	□□□□□ -0.23
SPG7-210	ENST00000564409	ZNF764	Q96H86	408 aa	Predicted RBP	13.63	□□□□□ -0.23
SPG7-210	ENST00000564409	KCNA7	Q96RP8	456 aa		13.63	□□□□□ -0.23
SPG7-210	ENST00000564409	FOXC2	Q99958	501 aa		13.63	□□□□□ -0.23
SPG7-210	ENST00000564409	TUBA1C	Q9BQE3	449 aa		13.63	□□□□□ -0.23
SPG7-210	ENST00000564409	EBPL	Q9BY08	206 aa		13.63	□□□□□ -0.23
SPG7-210	ENST00000564409	IQCG	Q9H095	443 aa	Known RBP	13.63	□□□□□ -0.23
SPG7-210	ENST00000564409	CLEC4M	Q9H2X3	399 aa	Predicted RBP	13.63	□□□□□ -0.23
SPG7-210	ENST00000564409	PIGM	Q9H3S5	423 aa		13.63	□□□□□ -0.23
SPG7-210	ENST00000564409	OXSM	Q9NWU1	459 aa		13.63	□□□□□ -0.23
SPG7-210	ENST00000564409	ABCA4	P78363	2273 aa		13.63	□□□□□ -0.23
SPG7-210	ENST00000564409		A0A1W2PPM1	405 aa		13.62	□□□□□ -0.23
SPG7-210	ENST00000564409	KDM4E	B2RXH2	506 aa	Predicted RBP	13.62	□□□□□ -0.23
SPG7-210	ENST00000564409	PLIN3	O60664	434 aa		13.62	□□□□□ -0.23
SPG7-210	ENST00000564409	CRH	P06850	196 aa		13.62	□□□□□ -0.23
SPG7-210	ENST00000564409	CPA3	P15088	417 aa		13.62	□□□□□ -0.23
SPG7-210	ENST00000564409	PCYT1A	P49585	367 aa		13.62	□□□□□ -0.23
SPG7-210	ENST00000564409	CLK3	P49761	638 aa	Known RBP	13.62	□□□□□ -0.23
SPG7-210	ENST00000564409	LHX2	P50458	406 aa		13.62	□□□□□ -0.23
SPG7-210	ENST00000564409	NCBP2	P52298	156 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
SPG7-210	ENST00000564409	DGKQ	P52824	942 aa		13.62	□□□□□ -0.23
SPG7-210	ENST00000564409	GAS1	P54826	345 aa		13.62	□□□□□ -0.23
SPG7-210	ENST00000564409	PSMD4	P55036	377 aa	Known RBP	13.62	□□□□□ -0.23
SPG7-210	ENST00000564409	DSCR4	P56555	118 aa	Predicted RBP	13.62	□□□□□ -0.23
SPG7-210	ENST00000564409	WNT3	P56703	355 aa		13.62	□□□□□ -0.23
SPG7-210	ENST00000564409	PSG6	Q00889	435 aa		13.62	□□□□□ -0.23
SPG7-210	ENST00000564409	DECR1	Q16698	335 aa		13.62	□□□□□ -0.23
SPG7-210	ENST00000564409	NOXRED1	Q6NXP6	359 aa		13.62	□□□□□ -0.23
SPG7-210	ENST00000564409	RNF165	Q6ZSG1	346 aa		13.62	□□□□□ -0.23
SPG7-210	ENST00000564409	OR2L13	Q8N349	312 aa		13.62	□□□□□ -0.23
SPG7-210	ENST00000564409	CHDH	Q8NE62	594 aa	Predicted RBP	13.62	□□□□□ -0.23
SPG7-210	ENST00000564409	RMND5B	Q96G75	393 aa	Predicted RBP	13.62	□□□□□ -0.23
SPG7-210	ENST00000564409	TRMO	Q9BU70	441 aa		13.62	□□□□□ -0.23
SPG7-210	ENST00000564409	CXXC4	Q9H2H0	198 aa		13.62	□□□□□ -0.23
SPG7-210	ENST00000564409	ANKRA2	Q9H9E1	313 aa		13.62	□□□□□ -0.23
SPG7-210	ENST00000564409	C3orf14	Q9HBI5	128 aa		13.62	□□□□□ -0.23
SPG7-210	ENST00000564409		Q9N2J8	555 aa		13.62	□□□□□ -0.23
SPG7-210	ENST00000564409	DKKL1	Q9UK85	242 aa		13.62	□□□□□ -0.23
SPG7-210	ENST00000564409	EEF1E1-BLOC1S5	C9J1V9	151 aa		13.61	□□□□□ -0.23
SPG7-210	ENST00000564409	SLC28A1	O00337	649 aa		13.61	□□□□□ -0.23
SPG7-210	ENST00000564409	EEF1E1	O43324	174 aa	Known RBP	13.61	□□□□□ -0.23
SPG7-210	ENST00000564409	ZIC3	O60481	467 aa		13.61	□□□□□ -0.23
SPG7-210	ENST00000564409	PSMG1	O95456	288 aa		13.61	□□□□□ -0.23
SPG7-210	ENST00000564409	JUN	P05412	331 aa	Known RBP	13.61	□□□□□ -0.23
SPG7-210	ENST00000564409	PEPD	P12955	493 aa		13.61	□□□□□ -0.23
SPG7-210	ENST00000564409	ZNF708	P17019	499 aa		13.61	□□□□□ -0.23
SPG7-210	ENST00000564409	DPP4	P27487	766 aa		13.61	□□□□□ -0.23
SPG7-210	ENST00000564409	EVI2B	P34910	448 aa		13.61	□□□□□ -0.23
SPG7-210	ENST00000564409	IST1	P53990	364 aa		13.61	□□□□□ -0.23
SPG7-210	ENST00000564409	DIO3	P55073	304 aa		13.61	□□□□□ -0.23
SPG7-210	ENST00000564409	FOXA1	P55317	472 aa		13.61	□□□□□ -0.23
SPG7-210	ENST00000564409	EEFSEC	P57772	596 aa	Known RBP	13.61	□□□□□ -0.23
SPG7-210	ENST00000564409	ZNF155	Q12901	538 aa	Predicted RBP	13.61	□□□□□ -0.23
SPG7-210	ENST00000564409	LIPM	Q5VYY2	423 aa		13.61	□□□□□ -0.23
SPG7-210	ENST00000564409	CAMKMT	Q7Z624	323 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms