RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 MANBAO00462 879 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 CST2P09228 141 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 GLULP15104 373 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 TLX1P31314 330 aaPredicted RBP5.95□□□□□ -1.46
CLK3-212ENST00000563418 MC4RP32245 332 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 MLLT10P55197 1068 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 HSD17B7P56937 341 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 LAPTM4AQ15012 233 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 OR2B11Q5JQS5 317 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 C10orf120Q5SQS8 335 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 ZNF676Q8N7Q3 588 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 NETO1Q8TDF5 533 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 CMBLQ96DG6 245 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 PKP4Q99569 1192 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 TNFSF13BQ9Y275 285 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 MAFBQ9Y5Q3 323 aaPredicted RBP5.95□□□□□ -1.46
CLK3-212ENST00000563418 NPFFR2Q9Y5X5 522 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 RIMS1Q86UR5 1692 aaKnown RBP5.95□□□□□ -1.46
CLK3-212ENST00000563418 UNC119BA6NIH7 251 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 LGI1O95970 557 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 ACP2P11117 423 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 SERPINA4P29622 427 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 SAPCD1Q5SSQ6 148 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 CATSPEREQ5SY80 951 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 HENMT1Q5T8I9 393 aaKnown RBP5.95□□□□□ -1.46
CLK3-212ENST00000563418 NCBP2-AS2Q69YL0 99 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 DNM1P34Q6PK57 102 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 FAM83HQ6ZRV2 1179 aaPredicted RBP5.95□□□□□ -1.46
CLK3-212ENST00000563418 GALNTL5Q7Z4T8 443 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 PELI3Q8N2H9 469 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 DUSP18Q8NEJ0 188 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 PPP1R14AQ96A00 147 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 B3GNT4Q9C0J1 378 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 KATNBL1Q9H079 304 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 ESRP2Q9H6T0 727 aaKnown RBP5.95□□□□□ -1.46
CLK3-212ENST00000563418 TREM2Q9NZC2 230 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 SLCO3A1Q9UIG8 710 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 ERVH48-1M5A8F1 160 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 MEIS2O14770 477 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 SYT7O43581 403 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 RHOCP08134 193 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 AHCYP23526 432 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 CSF2RBP32927 897 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 AQP2P41181 271 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 GATMP50440 423 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 RPL23AP62750 156 aaKnown RBP5.95□□□□□ -1.46
CLK3-212ENST00000563418 APOOLQ6UXV4 268 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 BEND7Q8N7W2 519 aaPredicted RBP5.95□□□□□ -1.46
CLK3-212ENST00000563418 NETO2Q8NC67 525 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 EDEM1Q92611 657 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 CCNL1Q9UK58 526 aaPredicted RBP5.95□□□□□ -1.46
CLK3-212ENST00000563418 FBXL3Q9UKT7 428 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 HIF3AQ9Y2N7 669 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 PCDHGA1Q9Y5H4 931 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 SCN9AQ15858 1988 aa5.95□□□□□ -1.46
CLK3-212ENST00000563418 CHD1O14646 1710 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 MEIKINA0A087WXM9 373 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 BCL2L11O43521 198 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 HLA-AP01891 365 aaKnown RBP5.94□□□□□ -1.46
CLK3-212ENST00000563418 SLC2A1P11166 492 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 TAS2R20P59543 309 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 PLA2G7Q13093 441 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 TMEM183BQ1AE95 376 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 CRY2Q49AN0 593 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 RTP2Q5QGT7 225 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 ADAM5Q6NVV9 412 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 BTLAQ7Z6A9 289 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 SLC5A8Q8N695 610 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 OR4E2Q8NGC2 313 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 CREB3L4Q8TEY5 395 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 CASTOR1Q8WTX7 329 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 TEX101Q9BY14 249 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 GABARAPL3Q9BY60 117 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 TUBB1Q9H4B7 451 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 MED17Q9NVC6 651 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 VPS29Q9UBQ0 182 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 NDRG4Q9ULP0 352 aaKnown RBP5.94□□□□□ -1.46
CLK3-212ENST00000563418 PIN4Q9Y237 131 aaKnown RBP5.94□□□□□ -1.46
CLK3-212ENST00000563418 WDR45Q9Y484 360 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 NALCNQ8IZF0 1738 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 SMIM30A4D0T7 59 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 XKRYO14609 159 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 SCGB1D2O95969 90 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 HSD3B1P14060 373 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 HSD3B2P26439 372 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 POLR2LP62875 67 aaKnown RBP5.94□□□□□ -1.46
CLK3-212ENST00000563418 PAFAH1B3Q15102 231 aaKnown RBP5.94□□□□□ -1.46
CLK3-212ENST00000563418 PTPRRQ15256 657 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 ZNF239Q16600 458 aaKnown RBP5.94□□□□□ -1.46
CLK3-212ENST00000563418 FBXO15Q8NCQ5 510 aaPredicted RBP5.94□□□□□ -1.46
CLK3-212ENST00000563418 LMO3Q8TAP4 145 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 SCGB1C1Q8TD33 95 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 OTUB2Q96DC9 234 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 FBXL18Q96ME1 805 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 TXN2Q99757 166 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 TSPAN10Q9H1Z9 355 aaPredicted RBP5.94□□□□□ -1.46
CLK3-212ENST00000563418 ASB8Q9H765 288 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 FBRSL1Q9HCM7 1045 aaKnown RBP5.94□□□□□ -1.46
CLK3-212ENST00000563418 EVA1BQ9NVM1 165 aa5.94□□□□□ -1.46
CLK3-212ENST00000563418 RBM7Q9Y580 266 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms